Wall clock time and date at job start Mon Mar 8 2021 06:50:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00901 * 1 3 3 H 1.00899 * 109.47437 * 1 2 4 4 H 1.00901 * 109.46543 * 240.00667 * 1 2 3 5 5 C 1.46894 * 109.47443 * 120.00895 * 1 2 3 6 6 H 1.09002 * 109.47252 * 299.99758 * 5 1 2 7 7 C 1.53003 * 109.47285 * 59.99323 * 5 1 2 8 8 C 1.53002 * 109.47494 * 179.97438 * 7 5 1 9 9 C 1.52997 * 109.46984 * 300.00606 * 8 7 5 10 10 H 1.09003 * 109.47659 * 299.99437 * 9 8 7 11 11 N 1.46506 * 109.47390 * 179.97438 * 9 8 7 12 12 C 1.38552 * 120.00240 * 154.99288 * 11 9 8 13 13 C 1.39727 * 120.47058 * 0.02562 * 12 11 9 14 14 C 1.38252 * 118.55175 * 180.02562 * 13 12 11 15 15 N 1.32345 * 119.32798 * 359.97438 * 14 13 12 16 16 C 1.32854 * 120.90302 * 359.97438 * 15 14 13 17 17 C 1.47551 * 119.21077 * 179.97438 * 16 15 14 18 18 C 1.36082 * 125.95012 * 0.02562 * 17 16 15 19 19 C 1.40743 * 106.73649 * 179.72678 * 18 17 16 20 20 C 1.34868 * 107.05446 * 0.40332 * 19 18 17 21 21 C 1.50699 * 125.65568 * 179.85079 * 20 19 18 22 22 O 1.42892 * 109.47249 * 299.72264 * 21 20 19 23 23 Si 1.86298 * 109.47032 * 179.71650 * 21 20 19 24 24 O 1.34158 * 108.69213 * 359.59244 * 20 19 18 25 25 N 1.32816 * 120.46660 * 180.27810 * 12 11 9 26 26 C 1.52998 * 109.47353 * 59.99693 * 9 8 7 27 27 C 1.52996 * 109.47151 * 299.99820 * 26 9 8 28 28 H 1.09008 * 109.46854 * 60.00414 * 7 5 1 29 29 H 1.08997 * 109.47208 * 300.00466 * 7 5 1 30 30 H 1.08996 * 109.47457 * 180.02562 * 8 7 5 31 31 H 1.09002 * 109.46473 * 59.99989 * 8 7 5 32 32 H 0.97005 * 119.99230 * 335.00377 * 11 9 8 33 33 H 1.07999 * 120.72662 * 359.97438 * 13 12 11 34 34 H 1.08001 * 120.33319 * 180.02562 * 14 13 12 35 35 H 1.08003 * 126.62871 * 359.97438 * 18 17 16 36 36 H 1.07997 * 126.47799 * 180.30170 * 19 18 17 37 37 H 1.09004 * 109.46453 * 59.72332 * 21 20 19 38 38 H 0.96703 * 114.00176 * 299.99748 * 22 21 20 39 39 H 1.48506 * 109.99834 * 58.68765 * 23 21 20 40 40 H 1.48502 * 110.00011 * 180.02562 * 23 21 20 41 41 H 1.08996 * 109.47350 * 60.00077 * 26 9 8 42 42 H 1.09003 * 109.47261 * 180.02562 * 26 9 8 43 43 H 1.09002 * 109.47425 * 299.99974 * 27 26 9 44 44 H 1.08996 * 109.47282 * 180.02562 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9513 0.0000 4 1 -0.3362 -0.4756 0.8239 5 6 -0.4897 -0.6926 -1.1992 6 1 -0.1265 -0.1789 -2.0894 7 6 0.0204 -2.1351 -1.1992 8 6 -0.4902 -2.8568 -2.4479 9 6 -2.0202 -2.8568 -2.4472 10 1 -2.3832 -3.3704 -1.5569 11 7 -2.5092 -3.5473 -3.6432 12 6 -3.7654 -4.1319 -3.6408 13 6 -4.5742 -4.0683 -2.5033 14 6 -5.8204 -4.6657 -2.5443 15 7 -6.2103 -5.2764 -3.6518 16 6 -5.4217 -5.3213 -4.7201 17 6 -5.8939 -6.0126 -5.9351 18 6 -7.0959 -6.6325 -6.0855 19 6 -7.1259 -7.1464 -7.3954 20 6 -5.9495 -6.8270 -7.9726 21 6 -5.5370 -7.1784 -9.3787 22 8 -5.5304 -8.5990 -9.5323 23 14 -3.8299 -6.5100 -9.7104 24 8 -5.2098 -6.1397 -7.0893 25 7 -4.2156 -4.7649 -4.7181 26 6 -2.5302 -1.4143 -2.4474 27 6 -2.0197 -0.6927 -1.1986 28 1 -0.3430 -2.6489 -0.3091 29 1 1.1103 -2.1351 -1.1992 30 1 -0.1272 -3.8845 -2.4477 31 1 -0.1273 -2.3431 -3.3382 32 1 -1.9533 -3.5952 -4.4368 33 1 -4.2332 -3.5643 -1.6111 34 1 -6.4693 -4.6337 -1.6816 35 1 -7.8777 -6.7109 -5.3444 36 1 -7.9368 -7.6947 -7.8516 37 1 -6.2424 -6.7398 -10.0846 38 1 -4.9237 -9.0566 -8.9342 39 1 -2.8644 -7.0759 -8.7343 40 1 -3.4116 -6.8493 -11.0943 41 1 -2.1674 -0.9007 -3.3376 42 1 -3.6202 -1.4143 -2.4464 43 1 -2.3826 -1.2063 -0.3082 44 1 -2.3834 0.3347 -1.1984 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_273584_18081478_17085348.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:50:32 Heat of formation + Delta-G solvation = 123.219216 kcal Electronic energy + Delta-G solvation = -26236.516187 eV Core-core repulsion = 22467.743570 eV Total energy + Delta-G solvation = -3768.772617 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.160 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -43.83184 -42.01721 -41.02638 -38.39193 -38.18050 -35.70190 -34.30452 -34.18492 -32.58349 -32.02069 -30.90894 -29.02529 -27.43450 -25.02721 -24.71912 -24.02038 -23.15589 -22.63094 -21.63497 -21.36569 -19.54575 -19.08591 -18.53695 -18.42308 -18.26160 -17.68051 -17.47426 -17.31122 -16.58589 -16.46390 -16.25171 -16.18119 -15.73989 -15.28326 -15.07048 -14.64190 -14.47169 -14.23093 -14.06355 -14.00953 -13.89390 -13.80500 -13.40834 -13.03620 -12.87122 -12.74862 -12.37126 -12.23934 -12.22256 -11.84731 -11.64691 -11.44157 -11.35179 -11.04186 -10.80897 -10.38467 -9.63045 -9.13763 -5.01720 -0.65289 0.29317 0.69359 1.08511 1.27293 1.47531 1.55777 1.60795 1.82367 1.85762 2.82208 2.84628 3.11969 3.17218 3.25903 3.32287 3.57712 3.63920 3.69705 3.76033 3.86104 3.90064 3.94615 4.08176 4.11396 4.12916 4.29897 4.35736 4.37210 4.43703 4.51194 4.60263 4.62174 4.62951 4.69666 4.70958 4.85017 4.90201 5.01315 5.05909 5.08686 5.10065 5.22288 5.29590 5.32119 5.68600 5.83788 6.08419 6.27730 6.44613 7.07652 Molecular weight = 318.16amu Principal moments of inertia in cm(-1) A = 0.019980 B = 0.002904 C = 0.002612 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1401.080506 B = 9639.706573 C =10717.540136 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.618 5.618 2 H 0.450 0.550 3 H 0.450 0.550 4 H 0.444 0.556 5 C 0.049 3.951 6 H 0.148 0.852 7 C -0.134 4.134 8 C -0.128 4.128 9 C 0.140 3.860 10 H 0.097 0.903 11 N -0.705 5.705 12 C 0.428 3.572 13 C -0.277 4.277 14 C 0.169 3.831 15 N -0.564 5.564 16 C 0.417 3.583 17 C 0.009 3.991 18 C -0.137 4.137 19 C -0.189 4.189 20 C -0.035 4.035 21 C -0.039 4.039 22 O -0.533 6.533 23 Si 0.774 3.226 24 O -0.158 6.158 25 N -0.594 5.594 26 C -0.138 4.138 27 C -0.136 4.136 28 H 0.103 0.897 29 H 0.109 0.891 30 H 0.066 0.934 31 H 0.080 0.920 32 H 0.407 0.593 33 H 0.186 0.814 34 H 0.204 0.796 35 H 0.170 0.830 36 H 0.170 0.830 37 H 0.158 0.842 38 H 0.390 0.610 39 H -0.295 1.295 40 H -0.279 1.279 41 H 0.071 0.929 42 H 0.060 0.940 43 H 0.105 0.895 44 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 20.694 26.277 27.357 43.210 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.020 5.020 2 H 0.281 0.719 3 H 0.281 0.719 4 H 0.274 0.726 5 C -0.057 4.057 6 H 0.166 0.834 7 C -0.172 4.172 8 C -0.167 4.167 9 C 0.036 3.964 10 H 0.115 0.885 11 N -0.337 5.337 12 C 0.182 3.818 13 C -0.304 4.304 14 C 0.009 3.991 15 N -0.285 5.285 16 C 0.151 3.849 17 C -0.043 4.043 18 C -0.159 4.159 19 C -0.209 4.209 20 C -0.087 4.087 21 C -0.148 4.148 22 O -0.341 6.341 23 Si 0.678 3.322 24 O -0.054 6.054 25 N -0.320 5.320 26 C -0.178 4.178 27 C -0.174 4.174 28 H 0.121 0.879 29 H 0.128 0.872 30 H 0.085 0.915 31 H 0.098 0.902 32 H 0.243 0.757 33 H 0.204 0.796 34 H 0.221 0.779 35 H 0.187 0.813 36 H 0.187 0.813 37 H 0.175 0.825 38 H 0.240 0.760 39 H -0.222 1.222 40 H -0.205 1.205 41 H 0.089 0.911 42 H 0.079 0.921 43 H 0.123 0.877 44 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 21.081 25.891 25.861 42.232 hybrid contribution 0.019 -1.249 0.553 1.366 sum 21.100 24.642 26.414 41.835 Atomic orbital electron populations 1.42237 1.22098 1.20939 1.16724 0.71861 0.71864 0.72556 1.22869 0.96801 0.95942 0.90081 0.83389 1.21949 1.03657 0.92591 0.99013 1.21721 0.92082 1.02464 1.00445 1.21546 0.95317 0.92676 0.86816 0.88506 1.44814 1.13074 1.57514 1.18251 1.18824 0.87633 0.86689 0.88610 1.22559 0.96960 1.10163 1.00685 1.23581 0.94121 0.86918 0.94525 1.68218 1.36333 1.23086 1.00870 1.19209 0.85478 0.90699 0.89472 1.19451 0.92961 1.06652 0.85209 1.22139 0.97059 0.98712 0.97964 1.21867 0.99149 1.05102 0.94737 1.23342 0.92219 0.99297 0.93855 1.24593 1.15613 0.85216 0.89356 1.86654 1.67134 1.16681 1.63607 0.93554 0.71572 0.90317 0.76777 1.83967 1.42423 1.58925 1.20101 1.67937 1.16447 1.17088 1.30495 1.21975 1.01604 0.94383 0.99808 1.21971 0.92142 1.04070 0.99253 0.87896 0.87217 0.91529 0.90151 0.75672 0.79646 0.77934 0.81280 0.81280 0.82476 0.75991 1.22192 1.20540 0.91056 0.92077 0.87675 0.87578 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.62 49.32 4.15 -168.69 -0.70 48.62 16 2 H 0.45 -37.27 8.96 -89.69 -0.80 -38.07 16 3 H 0.45 -37.22 8.96 -89.69 -0.80 -38.02 16 4 H 0.44 -36.53 8.90 -89.69 -0.80 -37.33 16 5 C 0.05 -3.31 3.03 44.92 0.14 -3.17 16 6 H 0.15 -9.95 8.14 -2.39 -0.02 -9.97 16 7 C -0.13 7.96 5.43 30.60 0.17 8.13 16 8 C -0.13 5.97 5.39 30.59 0.16 6.14 16 9 C 0.14 -5.81 2.15 44.99 0.10 -5.72 16 10 H 0.10 -4.15 6.51 -2.39 -0.02 -4.16 16 11 N -0.71 20.46 5.23 -324.09 -1.69 18.76 16 12 C 0.43 -8.46 7.68 133.24 1.02 -7.44 16 13 C -0.28 6.81 8.93 22.63 0.20 7.02 16 14 C 0.17 -3.26 11.28 84.62 0.95 -2.31 16 15 N -0.56 5.59 10.08 -189.80 -1.91 3.68 16 16 C 0.42 -2.86 7.58 137.16 1.04 -1.82 16 17 C 0.01 -0.04 7.15 24.23 0.17 0.13 16 18 C -0.14 0.92 10.56 22.38 0.24 1.16 16 19 C -0.19 1.50 10.77 22.11 0.24 1.73 16 20 C -0.04 0.28 6.22 24.91 0.15 0.44 16 21 C -0.04 0.44 2.98 71.24 0.21 0.65 16 22 O -0.53 4.73 12.87 -148.98 -1.92 2.81 16 23 Si 0.77 -9.03 32.10 68.60 2.20 -6.82 16 24 O -0.16 0.84 9.04 -5.68 -0.05 0.78 16 25 N -0.59 5.92 10.40 -187.12 -1.95 3.97 16 26 C -0.14 6.28 5.46 30.59 0.17 6.45 16 27 C -0.14 8.06 5.43 30.59 0.17 8.22 16 28 H 0.10 -6.25 8.14 -2.38 -0.02 -6.27 16 29 H 0.11 -6.69 8.14 -2.39 -0.02 -6.71 16 30 H 0.07 -2.67 8.14 -2.39 -0.02 -2.69 16 31 H 0.08 -3.64 8.14 -2.39 -0.02 -3.66 16 32 H 0.41 -11.18 8.73 -92.70 -0.81 -11.99 16 33 H 0.19 -6.49 6.28 -2.91 -0.02 -6.51 16 34 H 0.20 -5.43 8.06 -2.91 -0.02 -5.45 16 35 H 0.17 -1.52 8.06 -2.91 -0.02 -1.55 16 36 H 0.17 -1.82 8.06 -2.91 -0.02 -1.84 16 37 H 0.16 -2.38 7.96 -2.38 -0.02 -2.40 16 38 H 0.39 -5.43 8.70 -74.06 -0.64 -6.08 16 39 H -0.30 1.61 7.11 99.48 0.71 2.31 16 40 H -0.28 1.77 7.11 99.48 0.71 2.48 16 41 H 0.07 -3.05 8.14 -2.39 -0.02 -3.07 16 42 H 0.06 -2.37 7.75 -2.39 -0.02 -2.39 16 43 H 0.10 -6.43 8.14 -2.39 -0.02 -6.45 16 44 H 0.11 -6.40 8.14 -2.39 -0.02 -6.41 16 Total: 1.00 -101.17 360.19 -3.63 -104.80 By element: Atomic # 1 Polarization: -193.47 SS G_CDS: -2.74 Total: -196.21 kcal Atomic # 6 Polarization: 14.48 SS G_CDS: 5.13 Total: 19.61 kcal Atomic # 7 Polarization: 81.29 SS G_CDS: -6.25 Total: 75.04 kcal Atomic # 8 Polarization: 5.56 SS G_CDS: -1.97 Total: 3.59 kcal Atomic # 14 Polarization: -9.03 SS G_CDS: 2.20 Total: -6.82 kcal Total: -101.17 -3.63 -104.80 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081478_17085348.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 228.017 kcal (2) G-P(sol) polarization free energy of solvation -101.168 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 126.849 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.630 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -104.798 kcal (6) G-S(sol) free energy of system = (1) + (5) 123.219 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds