Wall clock time and date at job start Mon Mar 8 2021 06:58:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00899 * 1 3 3 H 1.00904 * 109.47509 * 1 2 4 4 H 1.00898 * 109.47030 * 240.00048 * 1 2 3 5 5 C 1.46902 * 109.46987 * 120.00237 * 1 2 3 6 6 H 1.09003 * 109.47269 * 299.99649 * 5 1 2 7 7 C 1.52994 * 109.47375 * 59.99894 * 5 1 2 8 8 C 1.53002 * 109.47294 * 179.97438 * 7 5 1 9 9 C 1.52998 * 109.46871 * 300.00098 * 8 7 5 10 10 H 1.08995 * 109.47033 * 299.99485 * 9 8 7 11 11 N 1.46507 * 109.46602 * 179.97438 * 9 8 7 12 12 C 1.38996 * 119.99648 * 155.00179 * 11 9 8 13 13 C 1.39331 * 120.01460 * 359.97438 * 12 11 9 14 14 N 1.32073 * 120.17851 * 180.02562 * 13 12 11 15 15 C 1.32005 * 120.21782 * 0.02562 * 14 13 12 16 16 C 1.39636 * 120.02206 * 359.97438 * 15 14 13 17 17 C 1.47634 * 120.08743 * 179.97438 * 16 15 14 18 18 C 1.36040 * 125.94340 * 5.02419 * 17 16 15 19 19 C 1.40825 * 106.73499 * 179.78081 * 18 17 16 20 20 C 1.34800 * 107.04771 * 0.35560 * 19 18 17 21 21 C 1.50699 * 125.65780 * 179.90486 * 20 19 18 22 22 O 1.42903 * 109.47152 * 64.71890 * 21 20 19 23 23 Si 1.86305 * 109.47184 * 184.71362 * 21 20 19 24 24 O 1.34230 * 108.68676 * 359.63997 * 20 19 18 25 25 N 1.32575 * 120.01267 * 180.28167 * 12 11 9 26 26 C 1.52994 * 109.47242 * 59.99870 * 9 8 7 27 27 C 1.52988 * 109.47181 * 299.99787 * 26 9 8 28 28 H 1.09003 * 109.47122 * 59.99665 * 7 5 1 29 29 H 1.09002 * 109.46922 * 300.00135 * 7 5 1 30 30 H 1.09000 * 109.47051 * 179.97438 * 8 7 5 31 31 H 1.09003 * 109.47191 * 59.99852 * 8 7 5 32 32 H 0.96993 * 120.00554 * 334.99921 * 11 9 8 33 33 H 1.07995 * 119.91133 * 0.02562 * 13 12 11 34 34 H 1.08000 * 119.99279 * 180.02562 * 15 14 13 35 35 H 1.08003 * 126.63040 * 0.02562 * 18 17 16 36 36 H 1.08001 * 126.47447 * 180.24480 * 19 18 17 37 37 H 1.08997 * 109.47198 * 304.71568 * 21 20 19 38 38 H 0.96700 * 114.00311 * 180.02562 * 22 21 20 39 39 H 1.48499 * 109.99670 * 178.68093 * 23 21 20 40 40 H 1.48497 * 110.00233 * 300.00062 * 23 21 20 41 41 H 1.09003 * 109.47122 * 60.00060 * 26 9 8 42 42 H 1.09002 * 109.46922 * 179.97438 * 26 9 8 43 43 H 1.08999 * 109.47278 * 299.99630 * 27 26 9 44 44 H 1.09005 * 109.47160 * 179.97438 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9513 0.0000 4 1 -0.3363 -0.4756 0.8238 5 6 -0.4896 -0.6926 -1.1994 6 1 -0.1264 -0.1787 -2.0895 7 6 0.0203 -2.1350 -1.1994 8 6 -0.4902 -2.8565 -2.4484 9 6 -2.0201 -2.8565 -2.4477 10 1 -2.3831 -3.3702 -1.5575 11 7 -2.5089 -3.5468 -3.6439 12 6 -3.7692 -4.1331 -3.6417 13 6 -4.5676 -4.0650 -2.5019 14 7 -5.7653 -4.6214 -2.4960 15 6 -6.2131 -5.2458 -3.5694 16 6 -5.4203 -5.3193 -4.7165 17 6 -5.9194 -6.0177 -5.9177 18 6 -7.1627 -6.5469 -6.0748 19 6 -7.2045 -7.1078 -7.3659 20 6 -5.9952 -6.9030 -7.9250 21 6 -5.5812 -7.3384 -9.3071 22 8 -6.3609 -6.6401 -10.2800 23 14 -3.7767 -6.9535 -9.5651 24 8 -5.2227 -6.2417 -7.0488 25 7 -4.2095 -4.7627 -4.7221 26 6 -2.5301 -1.4140 -2.4477 27 6 -2.0197 -0.6926 -1.1988 28 1 -0.3429 -2.6488 -0.3094 29 1 1.1104 -2.1350 -1.1994 30 1 -0.1264 -3.8840 -2.4485 31 1 -0.1272 -2.3428 -3.3386 32 1 -1.9532 -3.5947 -4.4374 33 1 -4.2060 -3.5558 -1.6208 34 1 -7.1933 -5.6991 -3.5608 35 1 -7.9642 -6.5353 -5.3510 36 1 -8.0459 -7.6090 -7.8212 37 1 -5.7428 -8.4110 -9.4137 38 1 -6.1481 -6.8716 -11.1945 39 1 -3.3484 -7.4071 -10.9127 40 1 -3.5432 -5.4940 -9.4223 41 1 -2.1672 -0.9003 -3.3379 42 1 -3.6202 -1.4141 -2.4476 43 1 -2.3827 -1.2063 -0.3086 44 1 -2.3827 0.3352 -1.1991 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081478_17085452.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:58:36 Heat of formation + Delta-G solvation = 159.454626 kcal Electronic energy + Delta-G solvation = -26205.757285 eV Core-core repulsion = 22438.555953 eV Total energy + Delta-G solvation = -3767.201331 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.160 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -44.34118 -43.64011 -42.78488 -40.16477 -38.64217 -37.14957 -36.04841 -34.85694 -34.11265 -33.46135 -31.57425 -30.45066 -28.09015 -26.37352 -26.03597 -25.64141 -24.75410 -23.51007 -23.25302 -22.03214 -21.46631 -21.26867 -20.06601 -19.91503 -19.78336 -19.38624 -18.71269 -18.41126 -17.99982 -17.78215 -17.48717 -17.10145 -16.92143 -16.61301 -16.39915 -16.18553 -15.79043 -15.45981 -15.35406 -14.94066 -14.90511 -14.61799 -14.57451 -14.52843 -14.30324 -14.16273 -13.91120 -13.44580 -13.42273 -13.36791 -13.25577 -12.63074 -12.56830 -11.56243 -11.25404 -11.10970 -10.40001 -9.68504 -5.56000 -1.45181 -1.27382 -0.65465 0.12731 0.53895 0.54505 0.59976 0.66134 0.76056 0.77726 0.93374 1.10987 1.37661 1.40319 1.50357 1.58754 1.85861 1.88082 1.99208 2.09232 2.13778 2.22110 2.28355 2.32432 2.45977 2.54493 2.61729 2.69078 2.74549 2.77228 2.99574 3.06133 3.16543 3.18509 3.26812 3.30061 3.34570 3.42901 3.50649 3.65301 4.05292 4.11568 4.17869 4.35179 4.56692 4.75843 5.14931 5.37171 5.54240 5.71887 5.95864 Molecular weight = 318.16amu Principal moments of inertia in cm(-1) A = 0.019851 B = 0.002886 C = 0.002606 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1410.188727 B = 9700.557594 C =10741.749466 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.438 0.562 4 H 0.434 0.566 5 C 0.023 3.977 6 H 0.144 0.856 7 C -0.137 4.137 8 C -0.126 4.126 9 C 0.150 3.850 10 H 0.091 0.909 11 N -0.715 5.715 12 C 0.363 3.637 13 C -0.015 4.015 14 N -0.390 5.390 15 C 0.016 3.984 16 C 0.215 3.785 17 C 0.021 3.979 18 C -0.154 4.154 19 C -0.175 4.175 20 C 0.016 3.984 21 C -0.041 4.041 22 O -0.532 6.532 23 Si 0.697 3.303 24 O -0.148 6.148 25 N -0.489 5.489 26 C -0.140 4.140 27 C -0.140 4.140 28 H 0.093 0.907 29 H 0.096 0.904 30 H 0.096 0.904 31 H 0.085 0.915 32 H 0.411 0.589 33 H 0.163 0.837 34 H 0.177 0.823 35 H 0.162 0.838 36 H 0.160 0.840 37 H 0.101 0.899 38 H 0.390 0.610 39 H -0.250 1.250 40 H -0.252 1.252 41 H 0.083 0.917 42 H 0.091 0.909 43 H 0.092 0.908 44 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 19.834 18.286 22.407 35.069 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.266 0.734 4 H 0.263 0.737 5 C -0.081 4.081 6 H 0.162 0.838 7 C -0.176 4.176 8 C -0.165 4.165 9 C 0.044 3.956 10 H 0.109 0.891 11 N -0.349 5.349 12 C 0.124 3.876 13 C -0.183 4.183 14 N -0.102 5.102 15 C -0.145 4.145 16 C 0.076 3.924 17 C -0.031 4.031 18 C -0.175 4.175 19 C -0.194 4.194 20 C -0.036 4.036 21 C -0.150 4.150 22 O -0.341 6.341 23 Si 0.595 3.405 24 O -0.044 6.044 25 N -0.212 5.212 26 C -0.179 4.179 27 C -0.178 4.178 28 H 0.112 0.888 29 H 0.115 0.885 30 H 0.115 0.885 31 H 0.103 0.897 32 H 0.248 0.752 33 H 0.180 0.820 34 H 0.194 0.806 35 H 0.180 0.820 36 H 0.178 0.822 37 H 0.119 0.881 38 H 0.240 0.760 39 H -0.174 1.174 40 H -0.176 1.176 41 H 0.102 0.898 42 H 0.109 0.891 43 H 0.111 0.889 44 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 20.419 19.020 22.355 35.755 hybrid contribution -0.531 0.254 -1.094 1.242 sum 19.888 19.274 21.261 34.915 Atomic orbital electron populations 1.42642 1.21232 1.20733 1.18784 0.73391 0.73353 0.73735 1.23588 0.99608 0.97487 0.87372 0.83818 1.22024 1.02920 0.90794 1.01837 1.21740 0.94099 1.03263 0.97389 1.21059 0.93625 0.91934 0.89005 0.89072 1.44304 1.14741 1.59282 1.16597 1.19191 0.87448 0.90561 0.90443 1.23105 0.92110 1.05013 0.98035 1.68297 1.11997 1.03575 1.26297 1.23298 1.01863 1.01248 0.88079 1.19261 0.89429 0.92847 0.90878 1.19699 0.91301 1.05679 0.86415 1.21943 0.96344 1.00808 0.98388 1.21589 0.98011 1.05085 0.94721 1.21511 0.91076 0.99156 0.91832 1.23841 1.08680 0.98494 0.83937 1.86556 1.61258 1.67808 1.18516 0.94523 0.75885 0.84272 0.85776 1.84020 1.40265 1.58343 1.21731 1.68016 1.14562 1.11905 1.26684 1.22099 1.03440 0.95443 0.96961 1.22062 0.89413 1.04260 1.02103 0.88831 0.88511 0.88505 0.89662 0.75166 0.81982 0.80621 0.81998 0.82240 0.88108 0.75984 1.17434 1.17607 0.89825 0.89077 0.88915 0.88720 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.52 4.15 -4.67 -0.02 24.50 16 2 H 0.44 -17.49 8.96 -39.29 -0.35 -17.84 16 3 H 0.44 -17.43 8.96 -39.29 -0.35 -17.79 16 4 H 0.43 -17.17 8.90 -39.29 -0.35 -17.52 16 5 C 0.02 -0.76 3.03 -67.71 -0.20 -0.97 16 6 H 0.14 -4.68 8.14 -51.93 -0.42 -5.11 16 7 C -0.14 4.01 5.43 -26.73 -0.15 3.86 16 8 C -0.13 3.01 5.39 -26.73 -0.14 2.87 16 9 C 0.15 -3.17 2.14 -67.93 -0.15 -3.32 16 10 H 0.09 -1.95 6.46 -51.93 -0.34 -2.29 16 11 N -0.72 11.19 5.24 -53.84 -0.28 10.91 16 12 C 0.36 -3.99 7.64 -154.80 -1.18 -5.18 16 13 C -0.02 0.18 10.00 -17.04 -0.17 0.01 16 14 N -0.39 3.27 10.47 -12.54 -0.13 3.14 16 15 C 0.02 -0.13 10.73 -16.96 -0.18 -0.31 16 16 C 0.22 -1.43 6.75 -82.89 -0.56 -1.99 16 17 C 0.02 -0.11 7.15 -36.54 -0.26 -0.37 16 18 C -0.15 1.04 10.26 -39.39 -0.40 0.63 16 19 C -0.17 1.00 10.78 -39.82 -0.43 0.57 16 20 C 0.02 -0.08 6.24 -35.53 -0.22 -0.30 16 21 C -0.04 0.28 2.97 36.01 0.11 0.38 16 22 O -0.53 3.05 12.86 -35.23 -0.45 2.59 16 23 Si 0.70 -4.98 32.11 -169.99 -5.46 -10.44 16 24 O -0.15 0.63 9.07 4.73 0.04 0.67 16 25 N -0.49 3.49 10.50 -8.87 -0.09 3.40 16 26 C -0.14 3.19 5.42 -26.74 -0.15 3.04 16 27 C -0.14 4.01 5.43 -26.74 -0.15 3.86 16 28 H 0.09 -2.75 8.14 -51.93 -0.42 -3.18 16 29 H 0.10 -2.87 8.14 -51.93 -0.42 -3.30 16 30 H 0.10 -2.08 8.14 -51.93 -0.42 -2.51 16 31 H 0.08 -2.00 8.14 -51.93 -0.42 -2.42 16 32 H 0.41 -6.29 8.73 -40.82 -0.36 -6.65 16 33 H 0.16 -2.55 6.07 -52.49 -0.32 -2.87 16 34 H 0.18 -1.80 7.00 -52.49 -0.37 -2.17 16 35 H 0.16 -1.57 7.28 -52.48 -0.38 -1.95 16 36 H 0.16 -1.12 8.06 -52.49 -0.42 -1.55 16 37 H 0.10 -0.94 7.96 -51.93 -0.41 -1.35 16 38 H 0.39 -3.89 8.74 45.56 0.40 -3.49 16 39 H -0.25 1.45 7.11 56.52 0.40 1.85 16 40 H -0.25 0.85 7.11 56.52 0.40 1.25 16 41 H 0.08 -1.83 8.14 -51.93 -0.42 -2.25 16 42 H 0.09 -1.79 7.68 -51.93 -0.40 -2.19 16 43 H 0.09 -2.70 8.14 -51.93 -0.42 -3.12 16 44 H 0.09 -2.73 8.14 -51.93 -0.42 -3.16 16 LS Contribution 357.94 15.07 5.39 5.39 Total: 1.00 -45.16 357.94 -11.46 -56.63 By element: Atomic # 1 Polarization: -93.36 SS G_CDS: -6.23 Total: -99.59 kcal Atomic # 6 Polarization: 7.03 SS G_CDS: -4.23 Total: 2.79 kcal Atomic # 7 Polarization: 42.47 SS G_CDS: -0.53 Total: 41.95 kcal Atomic # 8 Polarization: 3.68 SS G_CDS: -0.41 Total: 3.27 kcal Atomic # 14 Polarization: -4.98 SS G_CDS: -5.46 Total: -10.44 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -45.16 -11.46 -56.63 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081478_17085452.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 216.084 kcal (2) G-P(sol) polarization free energy of solvation -45.165 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 170.919 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.465 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -56.630 kcal (6) G-S(sol) free energy of system = (1) + (5) 159.455 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds