Wall clock time and date at job start Mon Mar 8 2021 06:59:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00893 * 1 3 3 H 1.00900 * 109.46635 * 1 2 4 4 H 1.00894 * 109.47394 * 240.00310 * 1 2 3 5 5 C 1.46897 * 109.47679 * 119.99323 * 1 2 3 6 6 H 1.08999 * 109.47488 * 180.02562 * 5 1 2 7 7 C 1.53006 * 109.47317 * 300.00706 * 5 1 2 8 8 C 1.52995 * 109.47151 * 179.97438 * 7 5 1 9 9 C 1.53001 * 109.47339 * 300.00058 * 8 7 5 10 10 H 1.08999 * 109.46886 * 300.00055 * 9 8 7 11 11 N 1.46507 * 109.47359 * 179.97438 * 9 8 7 12 12 C 1.38416 * 119.99633 * 85.00035 * 11 9 8 13 13 N 1.32525 * 119.14249 * 359.97438 * 12 11 9 14 14 C 1.32476 * 121.04082 * 180.02562 * 13 12 11 15 15 C 1.38164 * 119.32457 * 359.74118 * 14 13 12 16 16 C 1.40106 * 118.42118 * 0.52221 * 15 14 13 17 17 C 1.47539 * 120.53140 * 179.75269 * 16 15 14 18 18 C 1.36106 * 125.94193 * 179.70309 * 17 16 15 19 19 C 1.40746 * 106.73132 * 179.82196 * 18 17 16 20 20 C 1.34871 * 107.05454 * 0.34976 * 19 18 17 21 21 C 1.50699 * 125.65351 * 179.90749 * 20 19 18 22 22 O 1.42901 * 109.46830 * 299.71881 * 21 20 19 23 23 Si 1.86298 * 109.46950 * 179.72318 * 21 20 19 24 24 O 1.34167 * 108.69241 * 359.64632 * 20 19 18 25 25 N 1.32345 * 119.13540 * 180.02562 * 12 11 9 26 26 C 1.52998 * 109.47241 * 60.00020 * 9 8 7 27 27 C 1.53003 * 109.46619 * 60.00290 * 5 1 2 28 28 H 1.08998 * 109.46858 * 299.99497 * 7 5 1 29 29 H 1.08999 * 109.46793 * 59.99850 * 7 5 1 30 30 H 1.09002 * 109.47364 * 179.97438 * 8 7 5 31 31 H 1.08999 * 109.47177 * 59.99935 * 8 7 5 32 32 H 0.96992 * 119.99722 * 265.00188 * 11 9 8 33 33 H 1.08004 * 120.33410 * 179.97438 * 14 13 12 34 34 H 1.07993 * 120.78817 * 180.27935 * 15 14 13 35 35 H 1.07998 * 126.63504 * 0.02562 * 18 17 16 36 36 H 1.08005 * 126.47541 * 180.24665 * 19 18 17 37 37 H 1.08991 * 109.47351 * 59.72028 * 21 20 19 38 38 H 0.96708 * 114.00246 * 299.99864 * 22 21 20 39 39 H 1.48506 * 109.99834 * 180.02562 * 23 21 20 40 40 H 1.48502 * 110.00011 * 301.31529 * 23 21 20 41 41 H 1.08999 * 109.47152 * 60.00198 * 26 9 8 42 42 H 1.08998 * 109.47052 * 180.02562 * 26 9 8 43 43 H 1.08996 * 109.47179 * 60.00538 * 27 5 1 44 44 H 1.08999 * 109.47239 * 300.00212 * 27 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0089 0.0000 0.0000 3 1 -0.3363 0.9513 0.0000 4 1 -0.3364 -0.4756 0.8238 5 6 -0.4898 -0.6923 -1.1995 6 1 -1.5798 -0.6919 -1.1997 7 6 0.0203 0.0289 -2.4487 8 6 -0.4893 -0.6925 -3.6979 9 6 0.0209 -2.1349 -3.6978 10 1 1.1109 -2.1347 -3.6976 11 7 -0.4676 -2.8260 -4.8937 12 6 0.2273 -2.7205 -6.0862 13 7 1.3320 -1.9897 -6.1270 14 6 2.0260 -1.8626 -7.2482 15 6 1.5912 -2.5078 -8.3900 16 6 0.4171 -3.2691 -8.3196 17 6 -0.0924 -3.9730 -9.5119 18 6 -1.2128 -4.7438 -9.5666 19 6 -1.3191 -5.2109 -10.8901 20 6 -0.2656 -4.7147 -11.5704 21 6 0.0315 -4.9563 -13.0280 22 8 0.2067 -6.3567 -13.2525 23 14 1.5894 -4.0516 -13.5024 24 8 0.4710 -3.9655 -10.7359 25 7 -0.2296 -3.3515 -7.1561 26 6 -0.4891 -2.8562 -2.4486 27 6 0.0202 -2.1349 -1.1995 28 1 -0.3430 1.0566 -2.4487 29 1 1.1103 0.0288 -2.4487 30 1 -0.1264 -0.1784 -4.5880 31 1 -1.5793 -0.6928 -3.6981 32 1 -1.2778 -3.3573 -4.8498 33 1 2.9245 -1.2637 -7.2687 34 1 2.1411 -2.4241 -9.3156 35 1 -1.8911 -4.9535 -8.7528 36 1 -2.0964 -5.8479 -11.2857 37 1 -0.7986 -4.5924 -13.6332 38 1 0.9304 -6.7489 -12.7449 39 1 1.8930 -4.2814 -14.9378 40 1 1.4314 -2.5979 -13.2437 41 1 -1.5791 -2.8564 -2.4488 42 1 -0.1252 -3.8836 -2.4483 43 1 -0.3432 -2.6487 -0.3096 44 1 1.1101 -2.1349 -1.1995 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081478_17085550.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:59:51 Heat of formation + Delta-G solvation = 159.720127 kcal Electronic energy + Delta-G solvation = -26094.562961 eV Core-core repulsion = 22327.373143 eV Total energy + Delta-G solvation = -3767.189818 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.160 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -44.43152 -43.50907 -42.68240 -39.94913 -38.63324 -36.81874 -35.96737 -34.66127 -33.97180 -33.45519 -31.77660 -30.56580 -28.15971 -26.24211 -25.81155 -25.74906 -24.46258 -23.55372 -23.28260 -22.18572 -21.39522 -21.20364 -20.31852 -19.94787 -19.67577 -18.99515 -18.25823 -18.06828 -17.90607 -17.45776 -17.34916 -17.06025 -16.87982 -16.67844 -16.31063 -16.04424 -15.82490 -15.61181 -15.30305 -14.88234 -14.74318 -14.67810 -14.56718 -14.51065 -14.32990 -14.17532 -13.68849 -13.46601 -13.21413 -12.93885 -12.89683 -12.65753 -12.56287 -11.62651 -11.24999 -11.12538 -10.41165 -9.89993 -5.62591 -1.34647 -1.20512 -0.69712 0.14158 0.35983 0.55352 0.68352 0.72167 0.81095 0.88986 0.93235 1.14956 1.37432 1.48681 1.58548 1.67281 1.98792 1.99490 2.10783 2.20474 2.24892 2.34713 2.42222 2.46696 2.57890 2.66381 2.71758 2.86544 2.87520 2.94830 3.11678 3.18752 3.31190 3.33113 3.34268 3.41782 3.59034 3.64721 3.70726 3.72052 4.04289 4.14876 4.24068 4.31858 4.68799 4.77076 5.03753 5.19751 5.41606 5.80291 6.31256 Molecular weight = 318.16amu Principal moments of inertia in cm(-1) A = 0.034946 B = 0.002473 C = 0.002369 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 801.055335 B =11320.167685 C =11818.121373 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.434 0.566 3 H 0.437 0.563 4 H 0.437 0.563 5 C 0.023 3.977 6 H 0.143 0.857 7 C -0.138 4.138 8 C -0.131 4.131 9 C 0.161 3.839 10 H 0.099 0.901 11 N -0.699 5.699 12 C 0.573 3.427 13 N -0.573 5.573 14 C 0.198 3.802 15 C -0.265 4.265 16 C 0.304 3.696 17 C 0.001 3.999 18 C -0.128 4.128 19 C -0.184 4.184 20 C -0.024 4.024 21 C -0.031 4.031 22 O -0.526 6.526 23 Si 0.702 3.298 24 O -0.157 6.157 25 N -0.557 5.557 26 C -0.129 4.129 27 C -0.136 4.136 28 H 0.091 0.909 29 H 0.092 0.908 30 H 0.091 0.909 31 H 0.075 0.925 32 H 0.416 0.584 33 H 0.176 0.824 34 H 0.153 0.847 35 H 0.161 0.839 36 H 0.160 0.840 37 H 0.137 0.863 38 H 0.385 0.615 39 H -0.244 1.244 40 H -0.252 1.252 41 H 0.082 0.918 42 H 0.094 0.906 43 H 0.095 0.905 44 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.804 12.947 34.395 36.760 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.262 0.738 3 H 0.266 0.734 4 H 0.265 0.735 5 C -0.080 4.080 6 H 0.161 0.839 7 C -0.176 4.176 8 C -0.171 4.171 9 C 0.055 3.945 10 H 0.117 0.883 11 N -0.337 5.337 12 C 0.215 3.785 13 N -0.296 5.296 14 C 0.033 3.967 15 C -0.290 4.290 16 C 0.159 3.841 17 C -0.050 4.050 18 C -0.149 4.149 19 C -0.203 4.203 20 C -0.076 4.076 21 C -0.142 4.142 22 O -0.332 6.332 23 Si 0.601 3.399 24 O -0.053 6.053 25 N -0.280 5.280 26 C -0.168 4.168 27 C -0.174 4.174 28 H 0.110 0.890 29 H 0.111 0.889 30 H 0.109 0.891 31 H 0.094 0.906 32 H 0.254 0.746 33 H 0.193 0.807 34 H 0.171 0.829 35 H 0.178 0.822 36 H 0.177 0.823 37 H 0.154 0.846 38 H 0.233 0.767 39 H -0.168 1.168 40 H -0.176 1.176 41 H 0.101 0.899 42 H 0.112 0.888 43 H 0.113 0.887 44 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 0.422 13.703 34.175 36.822 hybrid contribution -0.686 -0.089 -0.327 0.765 sum -0.264 13.614 33.848 36.484 Atomic orbital electron populations 1.42647 1.21321 1.20728 1.18661 0.73759 0.73422 0.73474 1.23601 1.04459 0.95789 0.84182 0.83922 1.22043 1.03268 1.00115 0.92184 1.21973 1.01920 0.96011 0.97162 1.20915 1.00575 0.90125 0.82914 0.88326 1.43897 1.29221 1.55387 1.05213 1.18940 0.86459 0.87111 0.85969 1.67868 1.08590 1.22971 1.30152 1.22898 0.96160 0.91618 0.86070 1.22663 0.99852 1.03908 1.02595 1.18120 0.89083 0.89246 0.87700 1.19429 0.96636 1.05367 0.83531 1.22033 0.97235 0.97607 0.98000 1.21714 1.00422 1.04634 0.93552 1.23192 0.93328 0.97010 0.94053 1.24502 1.12423 0.89344 0.87909 1.86599 1.58059 1.19633 1.68903 0.94354 0.82004 0.80029 0.83486 1.83901 1.46871 1.56879 1.17693 1.67539 1.35375 1.26589 0.98539 1.21774 1.02504 1.00889 0.91591 1.21996 1.03305 0.90732 1.01398 0.89033 0.88946 0.89073 0.90589 0.74588 0.80741 0.82892 0.82180 0.82275 0.84614 0.76698 1.16761 1.17588 0.89916 0.88780 0.88679 0.88899 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.00 4.15 -4.66 -0.02 23.99 16 2 H 0.43 -16.79 8.90 -39.30 -0.35 -17.14 16 3 H 0.44 -17.11 8.96 -39.29 -0.35 -17.46 16 4 H 0.44 -17.18 8.96 -39.30 -0.35 -17.53 16 5 C 0.02 -0.74 3.03 -67.71 -0.20 -0.95 16 6 H 0.14 -4.53 8.14 -51.93 -0.42 -4.95 16 7 C -0.14 3.74 5.43 -26.73 -0.15 3.60 16 8 C -0.13 2.76 5.51 -26.73 -0.15 2.61 16 9 C 0.16 -3.11 2.45 -67.93 -0.17 -3.28 16 10 H 0.10 -1.78 7.50 -51.93 -0.39 -2.17 16 11 N -0.70 10.23 5.22 -55.82 -0.29 9.94 16 12 C 0.57 -5.93 8.40 -322.94 -2.71 -8.64 16 13 N -0.57 6.23 9.19 -14.02 -0.13 6.10 16 14 C 0.20 -2.17 11.28 -17.30 -0.20 -2.36 16 15 C -0.27 2.45 9.84 -38.91 -0.38 2.07 16 16 C 0.30 -2.21 6.78 -82.71 -0.56 -2.77 16 17 C 0.00 0.00 7.05 -36.56 -0.26 -0.26 16 18 C -0.13 0.83 10.62 -39.40 -0.42 0.41 16 19 C -0.18 1.18 10.77 -39.83 -0.43 0.75 16 20 C -0.02 0.16 6.22 -35.50 -0.22 -0.06 16 21 C -0.03 0.23 2.98 36.01 0.11 0.34 16 22 O -0.53 3.72 12.87 -35.23 -0.45 3.27 16 23 Si 0.70 -5.49 32.10 -169.99 -5.46 -10.95 16 24 O -0.16 1.01 8.86 4.84 0.04 1.05 16 25 N -0.56 4.40 10.20 -10.55 -0.11 4.29 16 26 C -0.13 2.92 5.39 -26.75 -0.14 2.78 16 27 C -0.14 3.81 5.43 -26.75 -0.15 3.67 16 28 H 0.09 -2.53 8.14 -51.93 -0.42 -2.95 16 29 H 0.09 -2.51 8.14 -51.93 -0.42 -2.94 16 30 H 0.09 -1.57 8.14 -51.93 -0.42 -1.99 16 31 H 0.08 -1.56 8.14 -51.93 -0.42 -1.99 16 32 H 0.42 -6.28 8.71 -40.82 -0.36 -6.63 16 33 H 0.18 -2.46 8.06 -52.48 -0.42 -2.89 16 34 H 0.15 -1.59 7.98 -52.49 -0.42 -2.01 16 35 H 0.16 -1.23 8.06 -52.49 -0.42 -1.65 16 36 H 0.16 -1.17 8.06 -52.48 -0.42 -1.59 16 37 H 0.14 -1.06 7.96 -51.93 -0.41 -1.47 16 38 H 0.38 -4.20 8.70 45.56 0.40 -3.81 16 39 H -0.24 1.16 7.11 56.52 0.40 1.56 16 40 H -0.25 1.31 7.11 56.52 0.40 1.71 16 41 H 0.08 -1.87 8.14 -51.93 -0.42 -2.29 16 42 H 0.09 -1.92 8.14 -51.93 -0.42 -2.34 16 43 H 0.09 -2.74 8.14 -51.93 -0.42 -3.16 16 44 H 0.09 -2.61 8.14 -51.93 -0.42 -3.03 16 LS Contribution 363.12 15.07 5.47 5.47 Total: 1.00 -42.18 363.12 -13.47 -55.65 By element: Atomic # 1 Polarization: -90.21 SS G_CDS: -6.51 Total: -96.71 kcal Atomic # 6 Polarization: 3.93 SS G_CDS: -6.02 Total: -2.10 kcal Atomic # 7 Polarization: 44.86 SS G_CDS: -0.55 Total: 44.32 kcal Atomic # 8 Polarization: 4.73 SS G_CDS: -0.41 Total: 4.32 kcal Atomic # 14 Polarization: -5.49 SS G_CDS: -5.46 Total: -10.95 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -42.18 -13.47 -55.65 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081478_17085550.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 215.372 kcal (2) G-P(sol) polarization free energy of solvation -42.180 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 173.192 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.472 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -55.652 kcal (6) G-S(sol) free energy of system = (1) + (5) 159.720 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds