Wall clock time and date at job start Mon Mar 8 2021 07:01:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00902 * 1 3 3 H 1.00900 * 109.46950 * 1 2 4 4 H 1.00901 * 109.47353 * 239.99483 * 1 2 3 5 5 C 1.46903 * 109.46492 * 119.99218 * 1 2 3 6 6 H 1.08999 * 109.46372 * 180.02562 * 5 1 2 7 7 C 1.52993 * 109.47405 * 300.00536 * 5 1 2 8 8 C 1.53007 * 109.47160 * 180.02562 * 7 5 1 9 9 C 1.53003 * 109.46425 * 299.99686 * 8 7 5 10 10 H 1.08998 * 109.47179 * 299.99914 * 9 8 7 11 11 N 1.46505 * 109.46759 * 179.97438 * 9 8 7 12 12 C 1.38017 * 119.99701 * 85.00177 * 11 9 8 13 13 N 1.33124 * 120.02720 * 359.97438 * 12 11 9 14 14 C 1.32191 * 120.17110 * 179.72480 * 13 12 11 15 15 N 1.32062 * 120.22437 * 0.02665 * 14 13 12 16 16 C 1.33474 * 120.04447 * 359.97220 * 15 14 13 17 17 C 1.47403 * 120.08504 * 180.02562 * 16 15 14 18 18 C 1.36172 * 125.95325 * 359.72063 * 17 16 15 19 19 C 1.40657 * 106.72702 * 179.85089 * 18 17 16 20 20 C 1.34933 * 107.06617 * 0.41087 * 19 18 17 21 21 C 1.50697 * 125.64630 * 179.76962 * 20 19 18 22 22 O 1.42901 * 109.47265 * 64.99565 * 21 20 19 23 23 Si 1.86295 * 109.47077 * 184.99511 * 21 20 19 24 24 O 1.34100 * 108.70542 * 359.74088 * 20 19 18 25 25 N 1.32808 * 120.02577 * 179.72729 * 12 11 9 26 26 C 1.52997 * 109.47516 * 60.00203 * 9 8 7 27 27 C 1.53002 * 109.47245 * 299.99883 * 26 9 8 28 28 H 1.09004 * 109.46882 * 299.99881 * 7 5 1 29 29 H 1.08998 * 109.47401 * 59.99963 * 7 5 1 30 30 H 1.08999 * 109.46959 * 179.97438 * 8 7 5 31 31 H 1.08999 * 109.46873 * 59.99316 * 8 7 5 32 32 H 0.97000 * 120.00465 * 264.99850 * 11 9 8 33 33 H 1.08006 * 119.89073 * 180.02562 * 14 13 12 34 34 H 1.07994 * 126.63525 * 359.97438 * 18 17 16 35 35 H 1.08003 * 126.46627 * 180.15063 * 19 18 17 36 36 H 1.08997 * 109.47254 * 304.99563 * 21 20 19 37 37 H 0.96703 * 114.00075 * 60.00357 * 22 21 20 38 38 H 1.48501 * 109.99950 * 58.68149 * 23 21 20 39 39 H 1.48499 * 110.00216 * 179.97438 * 23 21 20 40 40 H 1.09004 * 109.46812 * 59.99362 * 26 9 8 41 41 H 1.08997 * 109.47429 * 179.97438 * 26 9 8 42 42 H 1.08993 * 109.47486 * 179.97438 * 27 26 9 43 43 H 1.08998 * 109.46893 * 299.99947 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3363 0.9513 0.0000 4 1 -0.3364 -0.4757 0.8238 5 6 -0.4895 -0.6924 -1.1996 6 1 -1.5795 -0.6920 -1.1998 7 6 0.0206 0.0289 -2.4487 8 6 -0.4898 -0.6919 -3.6981 9 6 0.0198 -2.1346 -3.6983 10 1 1.1098 -2.1349 -3.6984 11 7 -0.4694 -2.8250 -4.8943 12 6 0.2231 -2.7199 -6.0835 13 7 1.3354 -1.9909 -6.1445 14 6 2.0039 -1.8928 -7.2807 15 7 1.5725 -2.5165 -8.3619 16 6 0.4584 -3.2497 -8.3106 17 6 -0.0236 -3.9467 -9.5167 18 6 0.5666 -3.9225 -10.7437 19 6 -0.2236 -4.7223 -11.5888 20 6 -1.2527 -5.1844 -10.8484 21 6 -2.3581 -6.0809 -11.3438 22 8 -1.8130 -7.3487 -11.7149 23 14 -3.6178 -6.3183 -9.9920 24 8 -1.1285 -4.7144 -9.5987 25 7 -0.2168 -3.3500 -7.1667 26 6 -0.4903 -2.8559 -2.4492 27 6 0.0200 -2.1351 -1.1998 28 1 -0.3428 1.0566 -2.4486 29 1 1.1106 0.0289 -2.4486 30 1 -0.1267 -0.1777 -4.5880 31 1 -1.5798 -0.6916 -3.6979 32 1 -1.2800 -3.3560 -4.8504 33 1 2.9060 -1.3005 -7.3250 34 1 1.4682 -3.3934 -11.0148 35 1 -0.0433 -4.9246 -12.6343 36 1 -2.8363 -5.6235 -12.2099 37 1 -1.3711 -7.8138 -10.9914 38 1 -4.1691 -5.0040 -9.5750 39 1 -4.7137 -7.2001 -10.4682 40 1 -1.5803 -2.8555 -2.4491 41 1 -0.1276 -3.8838 -2.4496 42 1 -0.3437 -2.6487 -0.3100 43 1 1.1100 -2.1354 -1.2000 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081478_17087578.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:01:16 Heat of formation + Delta-G solvation = 177.686730 kcal Electronic energy + Delta-G solvation = -26349.284142 eV Core-core repulsion = 22517.447503 eV Total energy + Delta-G solvation = -3831.836639 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.156 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -44.47277 -43.66318 -43.26478 -40.22369 -38.64127 -37.42503 -36.08751 -34.97914 -34.29160 -34.02146 -32.24373 -31.05013 -28.54647 -26.73647 -26.06303 -26.01277 -24.86596 -23.55690 -23.48694 -22.33967 -21.51225 -21.24893 -20.65781 -20.46663 -19.92658 -19.27105 -18.39297 -18.32181 -18.16623 -17.67850 -17.25024 -17.21487 -16.98014 -16.46468 -16.33891 -16.16726 -16.02469 -15.78439 -15.41271 -14.90965 -14.89296 -14.68387 -14.63354 -14.59141 -14.47341 -14.27157 -14.08299 -13.48903 -13.33761 -13.23428 -13.14138 -12.68308 -11.65755 -11.64460 -11.59124 -11.26312 -10.86754 -10.20130 -5.63914 -1.54025 -1.24904 -0.85635 0.04832 0.33911 0.49099 0.58027 0.63223 0.68458 0.78856 0.85872 1.10152 1.33507 1.42779 1.53610 1.60993 1.71473 1.92177 1.93343 2.03488 2.12163 2.14266 2.18830 2.34145 2.37111 2.58860 2.64382 2.69615 2.80010 2.85978 2.98070 3.10391 3.24063 3.27296 3.31012 3.43495 3.58026 3.66537 3.83917 3.96115 4.04712 4.23093 4.36254 4.50486 4.69557 4.90854 5.14099 5.32001 5.78636 6.32844 Molecular weight = 319.16amu Principal moments of inertia in cm(-1) A = 0.020307 B = 0.002893 C = 0.002614 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1378.535616 B = 9677.481630 C =10710.584455 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.434 0.566 3 H 0.437 0.563 4 H 0.437 0.563 5 C 0.023 3.977 6 H 0.144 0.856 7 C -0.138 4.138 8 C -0.131 4.131 9 C 0.156 3.844 10 H 0.102 0.898 11 N -0.684 5.684 12 C 0.604 3.396 13 N -0.612 5.612 14 C 0.394 3.606 15 N -0.575 5.575 16 C 0.490 3.510 17 C 0.006 3.994 18 C -0.108 4.108 19 C -0.186 4.186 20 C -0.017 4.017 21 C -0.032 4.032 22 O -0.526 6.526 23 Si 0.703 3.297 24 O -0.145 6.145 25 N -0.591 5.591 26 C -0.129 4.129 27 C -0.136 4.136 28 H 0.092 0.908 29 H 0.093 0.907 30 H 0.091 0.909 31 H 0.077 0.923 32 H 0.420 0.580 33 H 0.217 0.783 34 H 0.168 0.832 35 H 0.163 0.837 36 H 0.139 0.861 37 H 0.385 0.615 38 H -0.254 1.254 39 H -0.243 1.243 40 H 0.084 0.916 41 H 0.095 0.905 42 H 0.096 0.904 43 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.038 14.386 33.589 36.666 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.263 0.737 3 H 0.266 0.734 4 H 0.266 0.734 5 C -0.081 4.081 6 H 0.161 0.839 7 C -0.176 4.176 8 C -0.171 4.171 9 C 0.050 3.950 10 H 0.120 0.880 11 N -0.322 5.322 12 C 0.239 3.761 13 N -0.342 5.342 14 C 0.096 3.904 15 N -0.301 5.301 16 C 0.218 3.782 17 C -0.045 4.045 18 C -0.131 4.131 19 C -0.205 4.205 20 C -0.071 4.071 21 C -0.142 4.142 22 O -0.331 6.331 23 Si 0.603 3.397 24 O -0.041 6.041 25 N -0.319 5.319 26 C -0.168 4.168 27 C -0.174 4.174 28 H 0.111 0.889 29 H 0.112 0.888 30 H 0.110 0.890 31 H 0.096 0.904 32 H 0.259 0.741 33 H 0.233 0.767 34 H 0.186 0.814 35 H 0.181 0.819 36 H 0.156 0.844 37 H 0.233 0.767 38 H -0.178 1.178 39 H -0.167 1.167 40 H 0.102 0.898 41 H 0.114 0.886 42 H 0.114 0.886 43 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 1.700 14.560 33.495 36.562 hybrid contribution 0.230 0.471 -0.307 0.607 sum 1.930 15.031 33.188 36.484 Atomic orbital electron populations 1.42641 1.21344 1.20746 1.18630 0.73730 0.73383 0.73431 1.23597 1.04508 0.95765 0.84203 0.83876 1.22036 1.03329 1.00174 0.92055 1.21964 1.02048 0.95676 0.97378 1.21040 1.00824 0.90365 0.82772 0.88012 1.44022 1.28852 1.54202 1.05137 1.19216 0.85627 0.84914 0.86358 1.68574 1.09893 1.25005 1.30714 1.25240 0.95637 0.88467 0.81034 1.68955 1.14948 1.13509 1.32650 1.19533 0.85128 0.86192 0.87375 1.18827 0.90712 1.02283 0.92720 1.22103 1.01100 0.99241 0.90629 1.21743 0.95640 1.01035 1.02086 1.23314 1.00635 1.00970 0.82140 1.24536 0.97638 0.83758 1.08305 1.86603 1.77112 1.28767 1.40646 0.94269 0.78696 0.83991 0.82791 1.83991 1.38564 1.51142 1.30359 1.68698 1.35932 1.27699 0.99601 1.21779 1.02624 1.00933 0.91425 1.21999 1.03352 0.90731 1.01333 0.88908 0.88844 0.89032 0.90430 0.74093 0.76719 0.81441 0.81921 0.84443 0.76705 1.17780 1.16745 0.89757 0.88636 0.88556 0.88826 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.29 4.15 -4.67 -0.02 24.28 16 2 H 0.43 -17.00 8.90 -39.29 -0.35 -17.35 16 3 H 0.44 -17.30 8.96 -39.29 -0.35 -17.65 16 4 H 0.44 -17.38 8.96 -39.29 -0.35 -17.73 16 5 C 0.02 -0.74 3.02 -67.71 -0.20 -0.95 16 6 H 0.14 -4.62 8.14 -51.93 -0.42 -5.04 16 7 C -0.14 3.82 5.43 -26.73 -0.15 3.68 16 8 C -0.13 2.85 5.51 -26.73 -0.15 2.70 16 9 C 0.16 -3.13 2.46 -67.93 -0.17 -3.30 16 10 H 0.10 -1.93 7.54 -51.93 -0.39 -2.32 16 11 N -0.68 10.40 5.21 -55.67 -0.29 10.11 16 12 C 0.60 -6.35 8.45 -322.15 -2.72 -9.08 16 13 N -0.61 6.86 9.34 -15.39 -0.14 6.71 16 14 C 0.39 -4.10 12.39 -91.58 -1.14 -5.23 16 15 N -0.58 4.25 10.21 -12.65 -0.13 4.12 16 16 C 0.49 -3.02 7.63 -156.05 -1.19 -4.21 16 17 C 0.01 -0.03 7.17 -36.60 -0.26 -0.30 16 18 C -0.11 0.69 10.60 -39.41 -0.42 0.27 16 19 C -0.19 1.20 10.78 -39.84 -0.43 0.77 16 20 C -0.02 0.11 6.21 -35.48 -0.22 -0.11 16 21 C -0.03 0.24 2.98 36.00 0.11 0.35 16 22 O -0.53 3.77 12.88 -35.23 -0.45 3.31 16 23 Si 0.70 -5.51 32.11 -169.99 -5.46 -10.97 16 24 O -0.15 0.82 9.06 4.91 0.04 0.86 16 25 N -0.59 4.30 10.50 -12.03 -0.13 4.18 16 26 C -0.13 3.02 5.39 -26.73 -0.14 2.87 16 27 C -0.14 3.89 5.43 -26.73 -0.15 3.75 16 28 H 0.09 -2.62 8.14 -51.93 -0.42 -3.04 16 29 H 0.09 -2.60 8.14 -51.93 -0.42 -3.03 16 30 H 0.09 -1.64 8.14 -51.93 -0.42 -2.06 16 31 H 0.08 -1.65 8.14 -51.93 -0.42 -2.07 16 32 H 0.42 -6.59 8.72 -40.82 -0.36 -6.95 16 33 H 0.22 -3.07 8.06 -52.48 -0.42 -3.50 16 34 H 0.17 -1.29 8.06 -52.49 -0.42 -1.72 16 35 H 0.16 -1.24 8.06 -52.48 -0.42 -1.66 16 36 H 0.14 -1.10 7.96 -51.93 -0.41 -1.51 16 37 H 0.38 -4.22 8.70 45.56 0.40 -3.83 16 38 H -0.25 1.28 7.11 56.52 0.40 1.68 16 39 H -0.24 1.24 7.11 56.52 0.40 1.64 16 40 H 0.08 -1.97 8.14 -51.93 -0.42 -2.39 16 41 H 0.10 -2.02 8.14 -51.93 -0.42 -2.45 16 42 H 0.10 -2.83 8.14 -51.93 -0.42 -3.26 16 43 H 0.09 -2.69 8.14 -51.93 -0.42 -3.11 16 LS Contribution 358.33 15.07 5.40 5.40 Total: 1.00 -43.63 358.33 -14.49 -58.12 By element: Atomic # 1 Polarization: -91.25 SS G_CDS: -6.09 Total: -97.34 kcal Atomic # 6 Polarization: -1.56 SS G_CDS: -7.22 Total: -8.78 kcal Atomic # 7 Polarization: 50.10 SS G_CDS: -0.71 Total: 49.39 kcal Atomic # 8 Polarization: 4.59 SS G_CDS: -0.41 Total: 4.18 kcal Atomic # 14 Polarization: -5.51 SS G_CDS: -5.46 Total: -10.97 kcal Total LS contribution 5.40 Total: 5.40 kcal Total: -43.63 -14.49 -58.12 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081478_17087578.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 235.810 kcal (2) G-P(sol) polarization free energy of solvation -43.635 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 192.176 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.489 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -58.124 kcal (6) G-S(sol) free energy of system = (1) + (5) 177.687 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds