Wall clock time and date at job start Mon Mar 8 2021 07:25:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00899 * 1 3 3 H 1.00903 * 109.47605 * 1 2 4 4 H 1.00898 * 109.46896 * 239.99764 * 1 2 3 5 5 C 1.46904 * 109.47529 * 119.99932 * 1 2 3 6 6 H 1.08998 * 109.47320 * 300.00465 * 5 1 2 7 7 C 1.53005 * 109.46813 * 60.00012 * 5 1 2 8 8 C 1.52997 * 109.47027 * 180.02562 * 7 5 1 9 9 C 1.53001 * 109.47196 * 299.99618 * 8 7 5 10 10 H 1.08998 * 109.47385 * 300.00663 * 9 8 7 11 11 N 1.46494 * 109.47199 * 179.97438 * 9 8 7 12 12 C 1.34778 * 119.99724 * 155.00322 * 11 9 8 13 13 O 1.21557 * 120.00424 * 359.97438 * 12 11 9 14 14 C 1.47861 * 119.99706 * 180.02562 * 12 11 9 15 15 C 1.40043 * 120.04254 * 179.97438 * 14 12 11 16 16 C 1.38315 * 118.04513 * 179.97438 * 15 14 12 17 17 C 1.40080 * 117.99703 * 0.02562 * 16 15 14 18 18 C 1.47390 * 120.09407 * 179.97438 * 17 16 15 19 19 C 1.36213 * 125.95351 * 180.02562 * 18 17 16 20 20 C 1.40691 * 106.73373 * 179.77613 * 19 18 17 21 21 C 1.34913 * 107.06079 * 0.37294 * 20 19 18 22 22 C 1.50699 * 125.64692 * 179.88523 * 21 20 19 23 23 O 1.42898 * 109.46964 * 299.71992 * 22 21 20 24 24 Si 1.86301 * 109.47146 * 179.71910 * 22 21 20 25 25 O 1.34171 * 108.70858 * 359.62725 * 21 20 19 26 26 N 1.33325 * 119.80541 * 0.27979 * 17 16 15 27 27 N 1.28361 * 122.08359 * 359.41140 * 26 17 16 28 28 C 1.53005 * 109.46821 * 60.00256 * 9 8 7 29 29 C 1.52992 * 109.47432 * 179.97438 * 5 1 2 30 30 H 1.08998 * 109.47408 * 59.99673 * 7 5 1 31 31 H 1.09005 * 109.46800 * 299.99891 * 7 5 1 32 32 H 1.09000 * 109.46857 * 179.97438 * 8 7 5 33 33 H 1.08999 * 109.47171 * 59.99780 * 8 7 5 34 34 H 0.96997 * 120.00679 * 335.00316 * 11 9 8 35 35 H 1.08001 * 120.97552 * 0.02562 * 15 14 12 36 36 H 1.07997 * 120.99845 * 180.02562 * 16 15 14 37 37 H 1.08003 * 126.63380 * 359.97219 * 19 18 17 38 38 H 1.08002 * 126.47341 * 180.24524 * 20 19 18 39 39 H 1.09002 * 109.46959 * 59.71963 * 22 21 20 40 40 H 0.96698 * 113.99898 * 299.99550 * 23 22 21 41 41 H 1.48504 * 110.00019 * 58.68329 * 24 22 21 42 42 H 1.48503 * 110.00152 * 180.02562 * 24 22 21 43 43 H 1.08999 * 109.47325 * 59.99973 * 28 9 8 44 44 H 1.08996 * 109.46908 * 180.02562 * 28 9 8 45 45 H 1.08999 * 109.47269 * 300.00125 * 29 5 1 46 46 H 1.09000 * 109.47054 * 60.00439 * 29 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9513 0.0000 4 1 -0.3363 -0.4757 0.8238 5 6 -0.4898 -0.6925 -1.1994 6 1 -0.1264 -0.1787 -2.0894 7 6 0.0202 -2.1350 -1.1994 8 6 -0.4893 -2.8561 -2.4489 9 6 -2.0193 -2.8562 -2.4495 10 1 -2.3830 -3.3700 -1.5597 11 7 -2.5072 -3.5460 -3.6462 12 6 -3.7292 -4.1146 -3.6451 13 8 -4.4263 -4.0553 -2.6510 14 6 -4.2214 -4.8114 -4.8528 15 6 -5.4908 -5.4029 -4.8525 16 6 -5.9099 -6.0435 -6.0045 17 6 -5.0384 -6.0617 -7.1010 18 6 -5.4379 -6.7318 -8.3515 19 6 -4.6883 -6.8219 -9.4853 20 6 -5.4521 -7.5453 -10.4194 21 6 -6.6220 -7.8521 -9.8215 22 6 -7.7541 -8.6229 -10.4502 23 8 -8.2220 -7.9244 -11.6057 24 14 -9.1451 -8.7949 -9.2229 25 8 -6.6084 -7.3621 -8.5725 26 7 -3.8441 -5.4764 -7.0081 27 7 -3.4596 -4.8776 -5.9398 28 6 -2.5293 -1.4136 -2.4495 29 6 -2.0197 -0.6930 -1.1991 30 1 -0.3430 -2.6489 -0.3094 31 1 1.1103 -2.1350 -1.1995 32 1 -0.1256 -3.8836 -2.4491 33 1 -0.1257 -2.3421 -3.3387 34 1 -1.9509 -3.5937 -4.4393 35 1 -6.1241 -5.3595 -3.9788 36 1 -6.8799 -6.5154 -6.0570 37 1 -3.6978 -6.4189 -9.6367 38 1 -5.1584 -7.8043 -11.4260 39 1 -7.4021 -9.6125 -10.7415 40 1 -8.5511 -7.0342 -11.4207 41 1 -9.6127 -7.4524 -8.7936 42 1 -10.2676 -9.5539 -9.8306 43 1 -2.1657 -0.8997 -3.3393 44 1 -3.6193 -1.4136 -2.4494 45 1 -2.3827 -1.2071 -0.3091 46 1 -2.3834 0.3345 -1.1989 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081478_17088014.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:25:05 Heat of formation + Delta-G solvation = 124.983198 kcal Electronic energy + Delta-G solvation = -29203.152249 eV Core-core repulsion = 24987.547792 eV Total energy + Delta-G solvation = -4215.604457 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.160 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -44.49403 -43.58909 -43.03656 -41.57932 -39.29233 -38.76702 -36.26126 -35.49704 -35.30183 -34.58206 -33.99304 -32.13352 -31.15973 -28.42520 -27.06062 -26.19963 -26.05440 -25.28261 -23.62442 -23.51645 -23.10632 -22.32940 -21.47986 -21.21295 -20.45334 -19.99758 -19.85014 -19.50603 -18.77512 -18.45023 -18.30587 -17.79393 -17.50268 -17.38908 -17.22677 -16.77880 -16.51460 -16.27658 -16.11346 -16.06728 -15.58600 -15.56707 -15.28266 -14.96670 -14.79828 -14.75616 -14.63783 -14.53423 -14.40903 -14.20830 -13.76042 -13.54702 -13.49986 -13.27978 -12.63836 -12.60725 -12.33183 -12.30948 -11.86958 -11.66635 -11.48270 -11.38303 -10.05434 -5.57945 -1.94034 -1.25603 -1.21312 -0.24469 0.43974 0.51779 0.57172 0.62450 0.67090 0.72985 0.83292 0.92804 1.04721 1.34922 1.46769 1.57269 1.64746 1.66920 1.82602 1.95785 2.04731 2.15381 2.19285 2.33426 2.38941 2.42055 2.53211 2.55974 2.66455 2.72406 2.77106 2.83838 2.88451 2.90905 3.14797 3.24835 3.27560 3.28141 3.47425 3.55535 3.60888 3.72049 3.76422 3.93721 4.05199 4.07088 4.12378 4.28158 4.68847 5.12138 5.18707 5.63299 5.83589 6.43892 Molecular weight = 346.16amu Principal moments of inertia in cm(-1) A = 0.031715 B = 0.001855 C = 0.001794 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 882.656643 B =15088.428142 C =15602.123482 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.437 0.563 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.137 4.137 8 C -0.128 4.128 9 C 0.139 3.861 10 H 0.098 0.902 11 N -0.711 5.711 12 C 0.588 3.412 13 O -0.520 6.520 14 C 0.005 3.995 15 C -0.052 4.052 16 C -0.108 4.108 17 C 0.179 3.821 18 C -0.002 4.002 19 C -0.122 4.122 20 C -0.182 4.182 21 C -0.019 4.019 22 C -0.038 4.038 23 O -0.516 6.516 24 Si 0.700 3.300 25 O -0.160 6.160 26 N -0.221 5.221 27 N -0.196 5.196 28 C -0.132 4.132 29 C -0.139 4.139 30 H 0.093 0.907 31 H 0.096 0.904 32 H 0.096 0.904 33 H 0.085 0.915 34 H 0.417 0.583 35 H 0.170 0.830 36 H 0.168 0.832 37 H 0.165 0.835 38 H 0.162 0.838 39 H 0.143 0.857 40 H 0.382 0.618 41 H -0.255 1.255 42 H -0.245 1.245 43 H 0.080 0.920 44 H 0.092 0.908 45 H 0.092 0.908 46 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 20.471 21.254 25.926 39.280 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.266 0.734 4 H 0.262 0.738 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.176 4.176 8 C -0.166 4.166 9 C 0.035 3.965 10 H 0.116 0.884 11 N -0.363 5.363 12 C 0.372 3.628 13 O -0.394 6.394 14 C -0.140 4.140 15 C -0.081 4.081 16 C -0.136 4.136 17 C 0.039 3.961 18 C -0.052 4.052 19 C -0.143 4.143 20 C -0.201 4.201 21 C -0.070 4.070 22 C -0.148 4.148 23 O -0.323 6.323 24 Si 0.598 3.402 25 O -0.056 6.056 26 N -0.067 5.067 27 N -0.044 5.044 28 C -0.172 4.172 29 C -0.177 4.177 30 H 0.111 0.889 31 H 0.115 0.885 32 H 0.114 0.886 33 H 0.104 0.896 34 H 0.254 0.746 35 H 0.187 0.813 36 H 0.185 0.815 37 H 0.183 0.817 38 H 0.180 0.820 39 H 0.160 0.840 40 H 0.230 0.770 41 H -0.179 1.179 42 H -0.169 1.169 43 H 0.099 0.901 44 H 0.110 0.890 45 H 0.111 0.889 46 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 20.389 21.155 25.827 39.119 hybrid contribution -0.792 0.803 -0.328 1.175 sum 19.597 21.959 25.499 38.941 Atomic orbital electron populations 1.42646 1.21177 1.20709 1.18835 0.73432 0.73392 0.73754 1.23595 0.99663 0.97466 0.87296 0.83808 1.22020 1.02805 0.90836 1.01915 1.21773 0.94299 1.03201 0.97371 1.21074 0.93186 0.92453 0.89828 0.88353 1.45762 1.17648 1.55761 1.17153 1.17453 0.81608 0.77909 0.85866 1.90861 1.56210 1.59225 1.33077 1.22647 0.94609 1.01122 0.95663 1.22385 0.94753 0.91502 0.99442 1.22544 1.01761 0.97574 0.91735 1.20073 0.91948 0.93175 0.90901 1.19177 0.86903 1.04537 0.94629 1.22132 1.01318 0.99492 0.91364 1.21733 0.93471 1.02830 1.02031 1.23174 0.99541 1.01523 0.82787 1.24459 0.99459 0.96454 0.94404 1.86706 1.82291 1.32990 1.30281 0.94573 0.77802 0.84676 0.83128 1.83901 1.34766 1.56042 1.30897 1.73413 1.11896 1.05713 1.15714 1.73234 1.26883 1.08971 0.95277 1.21960 1.03597 0.94955 0.96644 1.22052 0.89291 1.04092 1.02273 0.88891 0.88541 0.88586 0.89621 0.74631 0.81255 0.81469 0.81706 0.82030 0.83988 0.76993 1.17925 1.16861 0.90085 0.88959 0.88944 0.88824 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.04 4.15 -4.67 -0.02 24.02 16 2 H 0.44 -17.23 8.96 -39.29 -0.35 -17.58 16 3 H 0.44 -17.15 8.96 -39.29 -0.35 -17.50 16 4 H 0.43 -16.78 8.90 -39.29 -0.35 -17.13 16 5 C 0.02 -0.75 3.02 -67.71 -0.20 -0.95 16 6 H 0.14 -4.60 8.14 -51.93 -0.42 -5.02 16 7 C -0.14 3.87 5.43 -26.73 -0.15 3.73 16 8 C -0.13 2.93 5.39 -26.73 -0.14 2.79 16 9 C 0.14 -2.72 2.45 -67.93 -0.17 -2.88 16 10 H 0.10 -1.78 7.58 -51.93 -0.39 -2.17 16 11 N -0.71 10.84 5.07 -54.74 -0.28 10.56 16 12 C 0.59 -6.56 7.77 -12.32 -0.10 -6.66 16 13 O -0.52 4.60 16.04 5.32 0.09 4.68 16 14 C 0.01 -0.05 6.83 -82.79 -0.57 -0.62 16 15 C -0.05 0.52 9.71 -38.88 -0.38 0.14 16 16 C -0.11 1.01 9.85 -38.86 -0.38 0.63 16 17 C 0.18 -1.31 6.83 -82.80 -0.57 -1.87 16 18 C 0.00 0.01 7.04 -36.59 -0.26 -0.25 16 19 C -0.12 0.82 10.60 -39.38 -0.42 0.40 16 20 C -0.18 1.21 10.77 -39.84 -0.43 0.78 16 21 C -0.02 0.13 6.22 -35.49 -0.22 -0.09 16 22 C -0.04 0.29 2.98 36.01 0.11 0.40 16 23 O -0.52 3.21 12.87 -35.23 -0.45 2.75 16 24 Si 0.70 -5.52 32.10 -169.99 -5.46 -10.98 16 25 O -0.16 1.09 8.83 4.78 0.04 1.13 16 26 N -0.22 1.49 11.23 33.30 0.37 1.86 16 27 N -0.20 1.64 10.73 33.34 0.36 2.00 16 28 C -0.13 2.81 5.50 -26.70 -0.15 2.67 16 29 C -0.14 3.78 5.43 -26.71 -0.15 3.63 16 30 H 0.09 -2.61 8.14 -51.93 -0.42 -3.04 16 31 H 0.10 -2.80 8.14 -51.93 -0.42 -3.22 16 32 H 0.10 -2.00 8.14 -51.93 -0.42 -2.42 16 33 H 0.09 -1.97 8.14 -51.93 -0.42 -2.39 16 34 H 0.42 -6.55 7.94 -40.82 -0.32 -6.87 16 35 H 0.17 -1.95 7.71 -52.49 -0.40 -2.35 16 36 H 0.17 -1.90 7.96 -52.49 -0.42 -2.32 16 37 H 0.17 -1.28 8.06 -52.48 -0.42 -1.70 16 38 H 0.16 -1.23 8.06 -52.49 -0.42 -1.65 16 39 H 0.14 -1.28 7.96 -51.93 -0.41 -1.70 16 40 H 0.38 -3.45 8.70 45.56 0.40 -3.05 16 41 H -0.26 1.43 7.11 56.52 0.40 1.84 16 42 H -0.24 1.15 7.11 56.52 0.40 1.56 16 43 H 0.08 -1.72 8.14 -51.93 -0.42 -2.14 16 44 H 0.09 -1.61 8.14 -51.93 -0.42 -2.03 16 45 H 0.09 -2.50 8.14 -51.93 -0.42 -2.92 16 46 H 0.09 -2.60 8.14 -51.93 -0.42 -3.02 16 LS Contribution 385.12 15.07 5.80 5.80 Total: 1.00 -43.02 385.12 -10.16 -53.18 By element: Atomic # 1 Polarization: -90.40 SS G_CDS: -6.46 Total: -96.86 kcal Atomic # 6 Polarization: 6.00 SS G_CDS: -4.16 Total: 1.84 kcal Atomic # 7 Polarization: 38.00 SS G_CDS: 0.43 Total: 38.44 kcal Atomic # 8 Polarization: 8.90 SS G_CDS: -0.33 Total: 8.57 kcal Atomic # 14 Polarization: -5.52 SS G_CDS: -5.46 Total: -10.98 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -43.02 -10.16 -53.18 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081478_17088014.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 178.166 kcal (2) G-P(sol) polarization free energy of solvation -43.023 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 135.143 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.160 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -53.182 kcal (6) G-S(sol) free energy of system = (1) + (5) 124.983 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds