Wall clock time and date at job start Mon Mar 8 2021 07:39:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00897 * 1 3 3 H 1.00906 * 109.46647 * 1 2 4 4 H 1.00900 * 109.47079 * 240.00531 * 1 2 3 5 5 C 1.46898 * 109.47623 * 120.00205 * 1 2 3 6 6 H 1.09002 * 109.46682 * 299.99852 * 5 1 2 7 7 C 1.52995 * 109.47124 * 59.99858 * 5 1 2 8 8 C 1.52998 * 109.46911 * 180.02562 * 7 5 1 9 9 C 1.53005 * 109.47442 * 300.00019 * 8 7 5 10 10 H 1.09000 * 109.46593 * 300.00316 * 9 8 7 11 11 N 1.46495 * 109.47381 * 180.02562 * 9 8 7 12 12 C 1.34774 * 120.00088 * 155.00116 * 11 9 8 13 13 O 1.21584 * 119.99926 * 359.97438 * 12 11 9 14 14 C 1.47555 * 119.99925 * 179.97438 * 12 11 9 15 15 C 1.40202 * 120.83214 * 179.97438 * 14 12 11 16 16 N 1.31852 * 119.04458 * 179.97438 * 15 14 12 17 17 C 1.33043 * 120.86934 * 0.02562 * 16 15 14 18 18 C 1.47269 * 119.07935 * 179.97438 * 17 16 15 19 19 C 1.36283 * 125.95836 * 179.97438 * 18 17 16 20 20 C 1.40612 * 106.72463 * 179.97438 * 19 18 17 21 21 C 1.34965 * 107.07388 * 0.02562 * 20 19 18 22 22 C 1.50699 * 125.64047 * 179.97438 * 21 20 19 23 23 O 1.42903 * 109.47152 * 65.00253 * 22 21 20 24 24 Si 1.86305 * 109.47184 * 184.99725 * 22 21 20 25 25 O 1.34106 * 108.72317 * 0.25910 * 21 20 19 26 26 N 1.33048 * 121.83889 * 0.25354 * 17 16 15 27 27 C 1.31850 * 120.86239 * 359.48284 * 26 17 16 28 28 C 1.52998 * 109.46753 * 59.99941 * 9 8 7 29 29 C 1.52998 * 109.47312 * 180.02562 * 5 1 2 30 30 H 1.09002 * 109.47346 * 60.00401 * 7 5 1 31 31 H 1.09002 * 109.47394 * 299.99894 * 7 5 1 32 32 H 1.09003 * 109.47135 * 180.02562 * 8 7 5 33 33 H 1.08999 * 109.47610 * 60.00325 * 8 7 5 34 34 H 0.97005 * 119.99971 * 335.00082 * 11 9 8 35 35 H 1.07994 * 120.47676 * 359.95722 * 15 14 12 36 36 H 1.08000 * 126.63726 * 359.94552 * 19 18 17 37 37 H 1.07995 * 126.46284 * 179.97438 * 20 19 18 38 38 H 1.08997 * 109.47198 * 304.99931 * 22 21 20 39 39 H 0.96700 * 114.00311 * 180.02562 * 23 22 21 40 40 H 1.48497 * 110.00233 * 300.00062 * 24 22 21 41 41 H 1.48492 * 109.99800 * 61.32455 * 24 22 21 42 42 H 1.08001 * 120.47248 * 180.25975 * 27 26 17 43 43 H 1.09001 * 109.46892 * 60.00106 * 28 9 8 44 44 H 1.08999 * 109.47195 * 180.02562 * 28 9 8 45 45 H 1.09001 * 109.47345 * 299.99867 * 29 5 1 46 46 H 1.09000 * 109.47358 * 59.99950 * 29 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3363 0.9514 0.0000 4 1 -0.3363 -0.4756 0.8239 5 6 -0.4898 -0.6925 -1.1994 6 1 -0.1265 -0.1786 -2.0894 7 6 0.0202 -2.1350 -1.1994 8 6 -0.4895 -2.8560 -2.4489 9 6 -2.0195 -2.8560 -2.4494 10 1 -2.3831 -3.3699 -1.5596 11 7 -2.5074 -3.5469 -3.6455 12 6 -3.7294 -4.1154 -3.6440 13 8 -4.4266 -4.0552 -2.6498 14 6 -4.2211 -4.8108 -4.8489 15 6 -5.4891 -5.4087 -4.8664 16 7 -5.8933 -6.0205 -5.9622 17 6 -5.1154 -6.0749 -7.0402 18 6 -5.6061 -6.7690 -8.2427 19 6 -4.9305 -6.9082 -9.4181 20 6 -5.7684 -7.6343 -10.2829 21 6 -6.9036 -7.9011 -9.6034 22 6 -8.0894 -8.6614 -10.1388 23 8 -7.7090 -10.0136 -10.4018 24 14 -9.4629 -8.6364 -8.8803 25 8 -6.8044 -7.3722 -8.3750 26 7 -3.9042 -5.5245 -7.0602 27 6 -3.4318 -4.8907 -6.0049 28 6 -2.5294 -1.4135 -2.4494 29 6 -2.0198 -0.6919 -1.1996 30 1 -0.3431 -2.6488 -0.3094 31 1 1.1102 -2.1350 -1.1995 32 1 -0.1265 -3.8838 -2.4487 33 1 -0.1258 -2.3422 -3.3387 34 1 -1.9510 -3.5952 -4.4386 35 1 -6.1255 -5.3690 -3.9948 36 1 -3.9429 -6.5329 -9.6421 37 1 -5.5459 -7.9233 -11.2994 38 1 -8.4337 -8.1947 -11.0617 39 1 -8.4247 -10.5629 -10.7500 40 1 -9.0062 -9.2700 -7.6173 41 1 -9.8894 -7.2378 -8.6217 42 1 -2.4495 -4.4426 -6.0295 43 1 -2.1657 -0.8995 -3.3392 44 1 -3.6194 -1.4133 -2.4493 45 1 -2.3835 -1.2054 -0.3096 46 1 -2.3827 0.3359 -1.1998 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081478_17119452.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:39:10 Heat of formation + Delta-G solvation = 122.128689 kcal Electronic energy + Delta-G solvation = -29232.451484 eV Core-core repulsion = 25016.723246 eV Total energy + Delta-G solvation = -4215.728238 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.160 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -44.41938 -43.65346 -43.08849 -41.62072 -39.32232 -38.47020 -36.45548 -35.83378 -35.11648 -34.51287 -34.05771 -32.29167 -31.16843 -28.49945 -26.75141 -26.26757 -26.06052 -25.31054 -23.64923 -23.41586 -23.14332 -22.17340 -21.49495 -21.25419 -20.34521 -20.04093 -19.94135 -19.63405 -19.25956 -18.46191 -17.95261 -17.70697 -17.64497 -17.34503 -17.12989 -16.71991 -16.51593 -16.27249 -16.22751 -16.15232 -15.69669 -15.59674 -15.35169 -15.01344 -14.88288 -14.64278 -14.63037 -14.59059 -14.46223 -14.27981 -13.74691 -13.60233 -13.34522 -13.23805 -13.02447 -12.54064 -12.19606 -12.18854 -11.60341 -11.52189 -11.33958 -11.04610 -10.03087 -5.56652 -1.98722 -1.25845 -0.97224 -0.18971 0.54133 0.54713 0.60184 0.61769 0.67250 0.67978 0.78649 0.94509 1.19379 1.41802 1.52651 1.55710 1.60304 1.81107 1.83478 1.87173 1.98331 2.04457 2.13140 2.24908 2.30184 2.32433 2.39210 2.56439 2.63793 2.75135 2.77518 2.81059 2.85345 3.06330 3.06356 3.19988 3.21288 3.31727 3.43937 3.51457 3.53935 3.67673 3.92605 3.98992 4.09365 4.16718 4.30106 4.71477 4.79356 5.01583 5.27232 5.82507 5.91351 5.94133 Molecular weight = 346.16amu Principal moments of inertia in cm(-1) A = 0.032200 B = 0.001863 C = 0.001798 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 869.354051 B =15028.741366 C =15572.052756 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.438 0.562 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.138 4.138 8 C -0.128 4.128 9 C 0.141 3.859 10 H 0.099 0.901 11 N -0.726 5.726 12 C 0.581 3.419 13 O -0.521 6.521 14 C -0.266 4.266 15 C 0.226 3.774 16 N -0.507 5.507 17 C 0.431 3.569 18 C 0.006 3.994 19 C -0.112 4.112 20 C -0.181 4.181 21 C 0.027 3.973 22 C -0.040 4.040 23 O -0.541 6.541 24 Si 0.709 3.291 25 O -0.151 6.151 26 N -0.503 5.503 27 C 0.200 3.800 28 C -0.132 4.132 29 C -0.139 4.139 30 H 0.093 0.907 31 H 0.096 0.904 32 H 0.095 0.905 33 H 0.084 0.916 34 H 0.403 0.597 35 H 0.188 0.812 36 H 0.169 0.831 37 H 0.165 0.835 38 H 0.101 0.899 39 H 0.394 0.606 40 H -0.247 1.247 41 H -0.251 1.251 42 H 0.177 0.823 43 H 0.079 0.921 44 H 0.092 0.908 45 H 0.092 0.908 46 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 21.572 23.401 21.341 38.320 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.266 0.734 4 H 0.263 0.737 5 C -0.080 4.080 6 H 0.161 0.839 7 C -0.176 4.176 8 C -0.166 4.166 9 C 0.036 3.964 10 H 0.117 0.883 11 N -0.379 5.379 12 C 0.368 3.632 13 O -0.397 6.397 14 C -0.274 4.274 15 C 0.058 3.942 16 N -0.220 5.220 17 C 0.170 3.830 18 C -0.045 4.045 19 C -0.134 4.134 20 C -0.200 4.200 21 C -0.025 4.025 22 C -0.150 4.150 23 O -0.350 6.350 24 Si 0.608 3.392 25 O -0.046 6.046 26 N -0.217 5.217 27 C 0.031 3.969 28 C -0.171 4.171 29 C -0.178 4.178 30 H 0.111 0.889 31 H 0.115 0.885 32 H 0.113 0.887 33 H 0.103 0.897 34 H 0.239 0.761 35 H 0.205 0.795 36 H 0.186 0.814 37 H 0.183 0.817 38 H 0.119 0.881 39 H 0.244 0.756 40 H -0.171 1.171 41 H -0.176 1.176 42 H 0.194 0.806 43 H 0.098 0.902 44 H 0.111 0.889 45 H 0.111 0.889 46 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 20.708 23.307 22.273 38.316 hybrid contribution 1.409 0.870 0.285 1.680 sum 22.117 24.178 22.558 39.782 Atomic orbital electron populations 1.42642 1.21182 1.20735 1.18829 0.73426 0.73358 0.73717 1.23580 0.99669 0.97411 0.87317 0.83853 1.22016 1.02804 0.90885 1.01919 1.21779 0.94378 1.03105 0.97380 1.21040 0.93009 0.92432 0.89890 0.88315 1.45801 1.17932 1.57282 1.16874 1.17657 0.81162 0.77658 0.86764 1.90856 1.55896 1.59049 1.33860 1.21672 0.99868 1.08481 0.97343 1.23612 0.91291 0.84062 0.95232 1.68783 1.35267 1.17996 0.99949 1.19848 0.85661 0.88473 0.88974 1.18915 0.86038 1.05676 0.93916 1.22083 1.01280 0.99060 0.91009 1.21682 0.93093 1.02783 1.02460 1.21757 0.98366 0.99610 0.82806 1.23858 0.98782 0.85011 1.07314 1.86449 1.41498 1.18886 1.88118 0.95126 0.81575 0.83968 0.78547 1.84048 1.33191 1.55683 1.31708 1.68239 1.13133 1.10844 1.29513 1.23350 0.98265 0.89120 0.86129 1.21951 1.03674 0.94908 0.96583 1.22057 0.89266 1.04131 1.02320 0.88857 0.88537 0.88650 0.89749 0.76058 0.79471 0.81392 0.81737 0.88093 0.75626 1.17101 1.17553 0.80594 0.90200 0.88910 0.88929 0.88790 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.22 4.15 -4.67 -0.02 24.20 16 2 H 0.44 -17.36 8.96 -39.29 -0.35 -17.71 16 3 H 0.44 -17.27 8.96 -39.29 -0.35 -17.62 16 4 H 0.43 -16.88 8.90 -39.29 -0.35 -17.23 16 5 C 0.02 -0.78 3.02 -67.72 -0.20 -0.98 16 6 H 0.14 -4.67 8.14 -51.93 -0.42 -5.09 16 7 C -0.14 3.96 5.43 -26.73 -0.15 3.82 16 8 C -0.13 3.06 5.39 -26.73 -0.14 2.92 16 9 C 0.14 -2.88 2.45 -67.93 -0.17 -3.05 16 10 H 0.10 -1.82 7.58 -51.93 -0.39 -2.22 16 11 N -0.73 12.44 5.03 -54.84 -0.28 12.16 16 12 C 0.58 -7.03 7.74 -12.46 -0.10 -7.13 16 13 O -0.52 4.54 16.09 5.29 0.09 4.63 16 14 C -0.27 2.72 5.91 -104.63 -0.62 2.10 16 15 C 0.23 -1.64 10.87 -16.81 -0.18 -1.82 16 16 N -0.51 1.98 10.34 -10.95 -0.11 1.87 16 17 C 0.43 -1.77 7.57 -156.63 -1.19 -2.95 16 18 C 0.01 -0.02 7.15 -36.62 -0.26 -0.28 16 19 C -0.11 0.52 10.55 -39.39 -0.42 0.10 16 20 C -0.18 0.80 10.78 -39.85 -0.43 0.37 16 21 C 0.03 -0.09 6.24 -35.47 -0.22 -0.31 16 22 C -0.04 0.25 2.98 36.01 0.11 0.36 16 23 O -0.54 3.33 12.86 -35.23 -0.45 2.88 16 24 Si 0.71 -4.39 32.11 -169.99 -5.46 -9.85 16 25 O -0.15 0.22 9.05 4.86 0.04 0.26 16 26 N -0.50 3.48 10.06 -10.95 -0.11 3.37 16 27 C 0.20 -2.21 10.80 -16.81 -0.18 -2.39 16 28 C -0.13 2.89 5.50 -26.71 -0.15 2.74 16 29 C -0.14 3.84 5.43 -26.71 -0.15 3.70 16 30 H 0.09 -2.66 8.14 -51.93 -0.42 -3.08 16 31 H 0.10 -2.85 8.14 -51.93 -0.42 -3.27 16 32 H 0.09 -2.09 8.14 -51.93 -0.42 -2.51 16 33 H 0.08 -2.06 8.14 -51.93 -0.42 -2.48 16 34 H 0.40 -7.79 6.72 -40.82 -0.27 -8.06 16 35 H 0.19 -1.62 7.73 -52.49 -0.41 -2.02 16 36 H 0.17 -1.16 8.06 -52.49 -0.42 -1.59 16 37 H 0.17 -1.06 8.06 -52.49 -0.42 -1.48 16 38 H 0.10 -0.90 7.96 -51.93 -0.41 -1.31 16 39 H 0.39 -4.50 8.74 45.56 0.40 -4.11 16 40 H -0.25 0.51 7.11 56.52 0.40 0.92 16 41 H -0.25 0.81 7.11 56.52 0.40 1.21 16 42 H 0.18 -2.86 6.52 -52.49 -0.34 -3.20 16 43 H 0.08 -1.77 8.14 -51.93 -0.42 -2.19 16 44 H 0.09 -1.65 8.14 -51.93 -0.42 -2.07 16 45 H 0.09 -2.52 8.14 -51.93 -0.42 -2.94 16 46 H 0.09 -2.64 8.14 -51.93 -0.42 -3.06 16 LS Contribution 383.19 15.07 5.77 5.77 Total: 1.00 -47.32 383.19 -11.30 -58.61 By element: Atomic # 1 Polarization: -94.79 SS G_CDS: -6.33 Total: -101.12 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -4.44 Total: -2.79 kcal Atomic # 7 Polarization: 42.12 SS G_CDS: -0.52 Total: 41.60 kcal Atomic # 8 Polarization: 8.09 SS G_CDS: -0.32 Total: 7.76 kcal Atomic # 14 Polarization: -4.39 SS G_CDS: -5.46 Total: -9.85 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -47.32 -11.30 -58.61 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081478_17119452.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 180.743 kcal (2) G-P(sol) polarization free energy of solvation -47.317 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 133.427 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.298 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -58.615 kcal (6) G-S(sol) free energy of system = (1) + (5) 122.129 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds