Wall clock time and date at job start Mon Mar 8 2021 07:42:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00902 * 1 3 3 H 1.00896 * 109.46876 * 1 2 4 4 H 1.00902 * 109.46370 * 239.99783 * 1 2 3 5 5 C 1.46898 * 109.46824 * 120.00199 * 1 2 3 6 6 H 1.08996 * 109.47161 * 300.00331 * 5 1 2 7 7 C 1.53006 * 109.47037 * 59.99717 * 5 1 2 8 8 C 1.53002 * 109.46671 * 179.97438 * 7 5 1 9 9 C 1.52998 * 109.47293 * 300.00027 * 8 7 5 10 10 H 1.08992 * 109.47100 * 300.00097 * 9 8 7 11 11 N 1.46509 * 109.46586 * 180.02562 * 9 8 7 12 12 C 1.34772 * 119.99427 * 155.00169 * 11 9 8 13 13 O 1.21593 * 120.00307 * 359.97438 * 12 11 9 14 14 C 1.47567 * 120.00043 * 179.97438 * 12 11 9 15 15 C 1.40299 * 120.43335 * 180.02562 * 14 12 11 16 16 C 1.36906 * 118.52724 * 179.72507 * 15 14 12 17 17 C 1.39813 * 119.33096 * 0.52239 * 16 15 14 18 18 C 1.47405 * 119.59287 * 179.74357 * 17 16 15 19 19 C 1.36202 * 125.95347 * 179.72297 * 18 17 16 20 20 C 1.40704 * 106.72590 * 179.74906 * 19 18 17 21 21 C 1.34906 * 107.06086 * 0.37745 * 20 19 18 22 22 C 1.50696 * 125.64163 * 179.88727 * 21 20 19 23 23 O 1.42903 * 109.47131 * 299.70979 * 22 21 20 24 24 Si 1.86305 * 109.47185 * 179.71520 * 22 21 20 25 25 O 1.34160 * 108.71222 * 359.61857 * 21 20 19 26 26 N 1.33103 * 120.81935 * 359.46683 * 17 16 15 27 27 C 1.31475 * 121.59151 * 0.25315 * 26 17 16 28 28 C 1.52997 * 109.46919 * 60.00494 * 9 8 7 29 29 C 1.52998 * 109.46897 * 179.97438 * 5 1 2 30 30 H 1.08998 * 109.47157 * 60.00348 * 7 5 1 31 31 H 1.09001 * 109.47296 * 299.99799 * 7 5 1 32 32 H 1.09001 * 109.46672 * 179.97438 * 8 7 5 33 33 H 1.08996 * 109.47133 * 60.00857 * 8 7 5 34 34 H 0.96999 * 120.00365 * 334.99930 * 11 9 8 35 35 H 1.07995 * 120.73389 * 359.96268 * 15 14 12 36 36 H 1.07995 * 120.33143 * 180.26456 * 16 15 14 37 37 H 1.08000 * 126.63580 * 359.97438 * 19 18 17 38 38 H 1.08002 * 126.46475 * 180.23681 * 20 19 18 39 39 H 1.08999 * 109.47358 * 59.71339 * 22 21 20 40 40 H 0.96700 * 114.00311 * 300.00591 * 23 22 21 41 41 H 1.48497 * 110.00233 * 179.97438 * 24 22 21 42 42 H 1.48492 * 109.99800 * 301.31995 * 24 22 21 43 43 H 1.08001 * 119.70381 * 180.02562 * 27 26 17 44 44 H 1.08992 * 109.47559 * 59.99884 * 28 9 8 45 45 H 1.09001 * 109.46931 * 179.97438 * 28 9 8 46 46 H 1.08998 * 109.47494 * 299.99772 * 29 5 1 47 47 H 1.08991 * 109.47003 * 60.00202 * 29 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3363 0.9513 0.0000 4 1 -0.3362 -0.4757 0.8239 5 6 -0.4896 -0.6925 -1.1994 6 1 -0.1262 -0.1788 -2.0894 7 6 0.0205 -2.1351 -1.1994 8 6 -0.4900 -2.8565 -2.4483 9 6 -2.0199 -2.8565 -2.4477 10 1 -2.3829 -3.3702 -1.5576 11 7 -2.5086 -3.5479 -3.6434 12 6 -3.7305 -4.1165 -3.6408 13 8 -4.4271 -4.0561 -2.6460 14 6 -4.2231 -4.8124 -4.8453 15 6 -5.4938 -5.4070 -4.8527 16 6 -5.9139 -6.0376 -5.9930 17 6 -5.0665 -6.0797 -7.1042 18 6 -5.5107 -6.7621 -8.3330 19 6 -4.7966 -6.8761 -9.4872 20 6 -5.5960 -7.6037 -10.3878 21 6 -6.7506 -7.8889 -9.7509 22 6 -7.9093 -8.6555 -10.3346 23 8 -8.4042 -7.9678 -11.4853 24 14 -9.2647 -8.7951 -9.0640 25 8 -6.6941 -7.3821 -8.5100 26 7 -3.8657 -5.5067 -7.0682 27 6 -3.4300 -4.8874 -5.9934 28 6 -2.5299 -1.4141 -2.4478 29 6 -2.0196 -0.6931 -1.1991 30 1 -0.3428 -2.6489 -0.3094 31 1 1.1105 -2.1350 -1.1994 32 1 -0.1262 -3.8840 -2.4485 33 1 -0.1269 -2.3428 -3.3385 34 1 -1.9528 -3.5964 -4.4369 35 1 -6.1280 -5.3648 -3.9796 36 1 -6.8885 -6.5014 -6.0323 37 1 -3.8066 -6.4867 -9.6736 38 1 -5.3354 -7.8797 -11.3989 39 1 -7.5769 -9.6529 -10.6224 40 1 -8.7178 -7.0714 -11.3032 41 1 -10.4135 -9.5486 -9.6275 42 1 -8.7538 -9.4802 -7.8497 43 1 -2.4505 -4.4325 -5.9978 44 1 -2.1670 -0.9004 -3.3379 45 1 -3.6200 -1.4141 -2.4479 46 1 -2.3826 -1.2072 -0.3092 47 1 -2.3832 0.3343 -1.1990 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081478_17119696.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:42:39 Heat of formation + Delta-G solvation = 102.227404 kcal Electronic energy + Delta-G solvation = -29077.516626 eV Core-core repulsion = 24926.351314 eV Total energy + Delta-G solvation = -4151.165311 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.165 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -44.36826 -43.59629 -42.56494 -41.21522 -39.24715 -38.57929 -36.18744 -35.15590 -34.36036 -34.24676 -34.02387 -31.98908 -30.90024 -28.06682 -26.22154 -25.98645 -25.79049 -25.02029 -23.54006 -23.23327 -22.97755 -22.10111 -21.45116 -21.22997 -20.29185 -19.94250 -19.67696 -19.13949 -18.66645 -18.16121 -17.88102 -17.65208 -17.38184 -17.31464 -17.01982 -16.73925 -16.39789 -16.20259 -16.03379 -15.77327 -15.51016 -15.32903 -15.27175 -14.92611 -14.81670 -14.76302 -14.61257 -14.54554 -14.45570 -14.23925 -14.07539 -13.56268 -13.41105 -13.29743 -12.62444 -12.36167 -12.03754 -11.81402 -11.52554 -11.48704 -11.41722 -11.17089 -9.82403 -5.59365 -1.73572 -1.23496 -0.71478 -0.08768 0.56085 0.63476 0.64084 0.69723 0.70386 0.71952 0.82110 1.05565 1.17030 1.40741 1.44823 1.55260 1.63468 1.91500 1.91870 2.02514 2.16484 2.21943 2.31808 2.36432 2.45372 2.54225 2.63437 2.70671 2.70927 2.79912 2.81004 2.87294 2.97666 3.10555 3.12131 3.24359 3.37767 3.41683 3.48946 3.58797 3.63160 3.72741 3.85848 4.00957 4.07452 4.12991 4.27123 4.35906 4.52040 4.79223 5.13682 5.27745 5.78995 5.84803 5.95525 Molecular weight = 345.16amu Principal moments of inertia in cm(-1) A = 0.031406 B = 0.001850 C = 0.001788 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 891.324297 B =15134.906445 C =15655.141206 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.438 0.562 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.138 4.138 8 C -0.128 4.128 9 C 0.141 3.859 10 H 0.097 0.903 11 N -0.727 5.727 12 C 0.574 3.426 13 O -0.526 6.526 14 C -0.204 4.204 15 C -0.004 4.004 16 C -0.161 4.161 17 C 0.241 3.759 18 C 0.000 4.000 19 C -0.131 4.131 20 C -0.182 4.182 21 C -0.027 4.027 22 C -0.031 4.031 23 O -0.527 6.527 24 Si 0.701 3.299 25 O -0.160 6.160 26 N -0.472 5.472 27 C 0.151 3.849 28 C -0.132 4.132 29 C -0.139 4.139 30 H 0.092 0.908 31 H 0.096 0.904 32 H 0.095 0.905 33 H 0.084 0.916 34 H 0.404 0.596 35 H 0.154 0.846 36 H 0.153 0.847 37 H 0.162 0.838 38 H 0.159 0.841 39 H 0.137 0.863 40 H 0.384 0.616 41 H -0.244 1.244 42 H -0.252 1.252 43 H 0.163 0.837 44 H 0.079 0.921 45 H 0.092 0.908 46 H 0.092 0.908 47 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 21.696 24.816 24.786 41.242 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.266 0.734 4 H 0.263 0.737 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.176 4.176 8 C -0.166 4.166 9 C 0.036 3.964 10 H 0.115 0.885 11 N -0.380 5.380 12 C 0.361 3.639 13 O -0.402 6.402 14 C -0.209 4.209 15 C -0.030 4.030 16 C -0.181 4.181 17 C 0.107 3.893 18 C -0.050 4.050 19 C -0.151 4.151 20 C -0.202 4.202 21 C -0.079 4.079 22 C -0.141 4.141 23 O -0.332 6.332 24 Si 0.600 3.400 25 O -0.056 6.056 26 N -0.182 5.182 27 C -0.009 4.009 28 C -0.171 4.171 29 C -0.178 4.178 30 H 0.111 0.889 31 H 0.114 0.886 32 H 0.113 0.887 33 H 0.102 0.898 34 H 0.240 0.760 35 H 0.172 0.828 36 H 0.170 0.830 37 H 0.180 0.820 38 H 0.177 0.823 39 H 0.154 0.846 40 H 0.233 0.767 41 H -0.168 1.168 42 H -0.176 1.176 43 H 0.180 0.820 44 H 0.098 0.902 45 H 0.111 0.889 46 H 0.110 0.890 47 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 21.042 23.548 24.951 40.247 hybrid contribution 0.710 0.045 0.175 0.732 sum 21.752 23.593 25.126 40.756 Atomic orbital electron populations 1.42645 1.21171 1.20724 1.18842 0.73442 0.73375 0.73733 1.23585 0.99686 0.97413 0.87288 0.83846 1.22020 1.02761 0.90884 1.01958 1.21777 0.94482 1.03063 0.97325 1.21015 0.92911 0.92405 0.90055 0.88452 1.45842 1.18107 1.57305 1.16767 1.17973 0.81004 0.77661 0.87227 1.90838 1.56017 1.59255 1.34118 1.20895 0.97968 1.06086 0.95988 1.21434 0.93572 0.89812 0.98195 1.21957 1.02070 1.01211 0.92819 1.18469 0.89537 0.91694 0.89624 1.19553 0.86240 1.03926 0.95248 1.22062 1.01370 1.00073 0.91641 1.21709 0.93423 1.03020 1.02002 1.23169 0.99762 1.01910 0.83013 1.24489 0.97912 0.96035 0.95687 1.86596 1.82454 1.32714 1.31455 0.94381 0.78745 0.89895 0.76964 1.83898 1.34294 1.55987 1.31448 1.67522 1.13648 1.09166 1.27838 1.22811 0.98440 0.92905 0.86763 1.21933 1.03653 0.94976 0.96532 1.22039 0.89250 1.04106 1.02363 0.88899 0.88579 0.88683 0.89772 0.75988 0.82794 0.82970 0.82034 0.82298 0.84631 0.76731 1.16760 1.17597 0.81998 0.90215 0.88926 0.88973 0.88830 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.19 4.15 -4.67 -0.02 24.17 16 2 H 0.44 -17.33 8.96 -39.29 -0.35 -17.68 16 3 H 0.44 -17.25 8.96 -39.29 -0.35 -17.60 16 4 H 0.43 -16.85 8.90 -39.29 -0.35 -17.20 16 5 C 0.02 -0.77 3.03 -67.71 -0.20 -0.98 16 6 H 0.14 -4.65 8.14 -51.93 -0.42 -5.07 16 7 C -0.14 3.94 5.43 -26.73 -0.15 3.79 16 8 C -0.13 3.03 5.39 -26.73 -0.14 2.89 16 9 C 0.14 -2.84 2.45 -67.93 -0.17 -3.01 16 10 H 0.10 -1.77 7.57 -51.93 -0.39 -2.16 16 11 N -0.73 12.22 5.03 -54.84 -0.28 11.95 16 12 C 0.57 -6.85 7.73 -12.46 -0.10 -6.95 16 13 O -0.53 4.47 16.07 5.28 0.08 4.55 16 14 C -0.20 2.19 5.89 -104.76 -0.62 1.57 16 15 C 0.00 0.04 9.65 -39.29 -0.38 -0.34 16 16 C -0.16 1.37 9.69 -39.48 -0.38 0.98 16 17 C 0.24 -1.69 6.74 -83.00 -0.56 -2.25 16 18 C 0.00 0.00 7.03 -36.58 -0.26 -0.26 16 19 C -0.13 0.77 10.58 -39.38 -0.42 0.36 16 20 C -0.18 1.06 10.77 -39.83 -0.43 0.63 16 21 C -0.03 0.16 6.22 -35.49 -0.22 -0.06 16 22 C -0.03 0.21 2.98 36.00 0.11 0.32 16 23 O -0.53 3.46 12.87 -35.23 -0.45 3.01 16 24 Si 0.70 -5.09 32.10 -169.99 -5.46 -10.55 16 25 O -0.16 0.94 8.75 4.80 0.04 0.98 16 26 N -0.47 3.73 10.03 -9.54 -0.10 3.63 16 27 C 0.15 -1.69 10.71 -17.14 -0.18 -1.88 16 28 C -0.13 2.86 5.50 -26.76 -0.15 2.72 16 29 C -0.14 3.82 5.43 -26.75 -0.15 3.68 16 30 H 0.09 -2.63 8.14 -51.93 -0.42 -3.05 16 31 H 0.10 -2.83 8.14 -51.93 -0.42 -3.25 16 32 H 0.09 -2.06 8.14 -51.93 -0.42 -2.48 16 33 H 0.08 -2.03 8.14 -51.93 -0.42 -2.45 16 34 H 0.40 -7.59 6.65 -40.82 -0.27 -7.87 16 35 H 0.15 -1.56 7.72 -52.49 -0.41 -1.96 16 36 H 0.15 -1.47 7.88 -52.49 -0.41 -1.88 16 37 H 0.16 -1.14 8.06 -52.49 -0.42 -1.57 16 38 H 0.16 -1.07 8.06 -52.49 -0.42 -1.49 16 39 H 0.14 -0.97 7.96 -51.93 -0.41 -1.39 16 40 H 0.38 -4.02 8.70 45.56 0.40 -3.62 16 41 H -0.24 1.04 7.11 56.52 0.40 1.44 16 42 H -0.25 1.15 7.11 56.52 0.40 1.55 16 43 H 0.16 -2.51 6.41 -52.49 -0.34 -2.85 16 44 H 0.08 -1.75 8.14 -51.93 -0.42 -2.18 16 45 H 0.09 -1.63 8.14 -51.93 -0.42 -2.06 16 46 H 0.09 -2.50 8.14 -51.93 -0.42 -2.92 16 47 H 0.09 -2.62 8.14 -51.93 -0.42 -3.04 16 LS Contribution 387.54 15.07 5.84 5.84 Total: 1.00 -44.51 387.54 -11.46 -55.97 By element: Atomic # 1 Polarization: -94.04 SS G_CDS: -6.74 Total: -100.78 kcal Atomic # 6 Polarization: 5.62 SS G_CDS: -4.39 Total: 1.23 kcal Atomic # 7 Polarization: 40.14 SS G_CDS: -0.39 Total: 39.75 kcal Atomic # 8 Polarization: 8.86 SS G_CDS: -0.33 Total: 8.54 kcal Atomic # 14 Polarization: -5.09 SS G_CDS: -5.46 Total: -10.55 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -44.51 -11.46 -55.97 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081478_17119696.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 158.195 kcal (2) G-P(sol) polarization free energy of solvation -44.507 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 113.688 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.460 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -55.968 kcal (6) G-S(sol) free energy of system = (1) + (5) 102.227 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds