Wall clock time and date at job start Mon Mar 8 2021 07:55:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00902 * 1 3 3 H 1.00900 * 109.46817 * 1 2 4 4 H 1.00906 * 109.46761 * 240.00384 * 1 2 3 5 5 C 1.46894 * 109.47634 * 120.00075 * 1 2 3 6 6 H 1.08996 * 109.47080 * 299.99900 * 5 1 2 7 7 C 1.53005 * 109.46816 * 60.00202 * 5 1 2 8 8 C 1.53005 * 109.46819 * 179.97438 * 7 5 1 9 9 C 1.52997 * 109.47290 * 300.00210 * 8 7 5 10 10 H 1.09005 * 109.47000 * 299.99862 * 9 8 7 11 11 N 1.46499 * 109.47145 * 180.02562 * 9 8 7 12 12 C 1.38552 * 120.00014 * 154.99584 * 11 9 8 13 13 C 1.39702 * 120.47396 * 359.97438 * 12 11 9 14 14 C 1.38206 * 118.52210 * 180.02562 * 13 12 11 15 15 N 1.32393 * 119.31457 * 359.74855 * 14 13 12 16 16 C 1.32714 * 120.91655 * 0.51512 * 15 14 13 17 17 C 1.48045 * 119.20053 * 179.75682 * 16 15 14 18 18 C 1.34570 * 122.87185 * 179.97438 * 17 16 15 19 19 S 1.70626 * 110.51316 * 180.28366 * 18 17 16 20 20 C 1.75731 * 91.70358 * 359.72570 * 19 18 17 21 21 C 1.33110 * 109.77699 * 0.02562 * 20 19 18 22 22 C 1.50706 * 123.12689 * 179.97438 * 21 20 19 23 23 O 1.42906 * 109.46702 * 105.02463 * 22 21 20 24 24 Si 1.86301 * 109.47233 * 345.02752 * 22 21 20 25 25 N 1.32678 * 121.59886 * 359.46861 * 16 15 14 26 26 C 1.52996 * 109.47253 * 59.99944 * 9 8 7 27 27 C 1.53000 * 109.46965 * 299.99699 * 26 9 8 28 28 H 1.08996 * 109.47543 * 59.99981 * 7 5 1 29 29 H 1.09000 * 109.46822 * 299.99445 * 7 5 1 30 30 H 1.09003 * 109.47035 * 179.97438 * 8 7 5 31 31 H 1.09005 * 109.46986 * 60.00080 * 8 7 5 32 32 H 0.96996 * 119.99762 * 335.00249 * 11 9 8 33 33 H 1.07996 * 120.73619 * 0.02562 * 13 12 11 34 34 H 1.07999 * 120.34048 * 180.02562 * 14 13 12 35 35 H 1.08002 * 124.73987 * 359.97438 * 18 17 16 36 36 H 1.08003 * 125.11107 * 179.97438 * 20 19 18 37 37 H 1.09000 * 109.47318 * 225.02042 * 22 21 20 38 38 H 0.96698 * 113.99410 * 179.97438 * 23 22 21 39 39 H 1.48497 * 109.99842 * 59.99960 * 24 22 21 40 40 H 1.48502 * 109.99925 * 181.31722 * 24 22 21 41 41 H 1.08996 * 109.47451 * 60.00114 * 26 9 8 42 42 H 1.09005 * 109.47083 * 180.02562 * 26 9 8 43 43 H 1.08995 * 109.47896 * 300.00473 * 27 26 9 44 44 H 1.09003 * 109.46981 * 180.02562 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3363 0.9513 0.0000 4 1 -0.3363 -0.4756 0.8239 5 6 -0.4898 -0.6925 -1.1993 6 1 -0.1265 -0.1787 -2.0893 7 6 0.0202 -2.1350 -1.1993 8 6 -0.4905 -2.8565 -2.4482 9 6 -2.0205 -2.8563 -2.4475 10 1 -2.3834 -3.3700 -1.5572 11 7 -2.5094 -3.5477 -3.6430 12 6 -3.7656 -4.1321 -3.6402 13 6 -4.5740 -4.0686 -2.5026 14 6 -5.8197 -4.6659 -2.5441 15 7 -6.2111 -5.2725 -3.6539 16 6 -5.4207 -5.3224 -4.7188 17 6 -5.8946 -6.0154 -5.9382 18 6 -5.1552 -6.1098 -7.0586 19 16 -6.0063 -6.9632 -8.2664 20 6 -7.3873 -7.1936 -7.2043 21 6 -7.1456 -6.6303 -6.0227 22 6 -8.1327 -6.6493 -4.8840 23 8 -7.7054 -7.5924 -3.8991 24 14 -9.8117 -7.1390 -5.5257 25 7 -4.2183 -4.7614 -4.7191 26 6 -2.5304 -1.4138 -2.4475 27 6 -2.0198 -0.6925 -1.1986 28 1 -0.3431 -2.6488 -0.3093 29 1 1.1102 -2.1350 -1.1994 30 1 -0.1268 -3.8841 -2.4484 31 1 -0.1275 -2.3428 -3.3384 32 1 -1.9536 -3.5963 -4.4364 33 1 -4.2332 -3.5640 -1.6107 34 1 -6.4689 -4.6341 -1.6816 35 1 -4.1639 -5.6983 -7.1784 36 1 -8.2958 -7.7134 -7.4705 37 1 -8.1899 -5.6571 -4.4363 38 1 -8.2947 -7.6573 -3.1351 39 1 -9.7469 -8.4901 -6.1385 40 1 -10.8010 -7.1306 -4.4181 41 1 -2.1674 -0.9002 -3.3377 42 1 -3.6204 -1.4138 -2.4466 43 1 -2.3827 -1.2061 -0.3084 44 1 -2.3835 0.3351 -1.1984 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081482_17085348.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:55:33 Heat of formation + Delta-G solvation = 180.105933 kcal Electronic energy + Delta-G solvation = -26436.819209 eV Core-core repulsion = 22794.584065 eV Total energy + Delta-G solvation = -3642.235144 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.133 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -43.64319 -42.74657 -40.57206 -39.80444 -37.59348 -37.07267 -34.91858 -34.13340 -33.18076 -31.60590 -30.77327 -28.22107 -26.48518 -26.26072 -25.80715 -24.79425 -23.90174 -23.22864 -21.50121 -21.29611 -20.81889 -20.05795 -19.81620 -19.26757 -18.94342 -18.83694 -18.05619 -17.59494 -17.49268 -17.08305 -16.89130 -16.71066 -16.21594 -15.95464 -15.89237 -15.62333 -15.47018 -15.19158 -14.90815 -14.77693 -14.59666 -14.57348 -14.31799 -14.26658 -14.05814 -13.86141 -13.41262 -13.08520 -13.00355 -12.59048 -12.31510 -12.24354 -11.92631 -11.09580 -10.51205 -10.47135 -10.25929 -9.76129 -5.39121 -1.29442 -1.16120 -0.42035 -0.34356 0.03695 0.37602 0.57946 0.58373 0.65703 0.76944 0.88691 0.97329 1.15617 1.38622 1.48703 1.54353 1.57172 1.85435 1.92340 2.07280 2.21785 2.24131 2.28841 2.34493 2.45137 2.55874 2.59008 2.69353 2.75547 2.88356 3.04912 3.12109 3.16366 3.25572 3.35042 3.43157 3.50367 3.51523 3.69923 3.77630 3.91166 4.15037 4.21679 4.37932 4.61472 4.80539 4.89254 5.18922 5.56753 6.13440 6.51995 Molecular weight = 334.13amu Principal moments of inertia in cm(-1) A = 0.021360 B = 0.002819 C = 0.002581 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1310.543760 B = 9928.868032 C =10845.459695 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.438 0.562 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.137 4.137 8 C -0.127 4.127 9 C 0.151 3.849 10 H 0.090 0.910 11 N -0.715 5.715 12 C 0.440 3.560 13 C -0.307 4.307 14 C 0.183 3.817 15 N -0.527 5.527 16 C 0.436 3.564 17 C -0.058 4.058 18 C -0.199 4.199 19 S 0.215 5.785 20 C -0.236 4.236 21 C -0.046 4.046 22 C -0.034 4.034 23 O -0.523 6.523 24 Si 0.662 3.338 25 N -0.571 5.571 26 C -0.138 4.138 27 C -0.139 4.139 28 H 0.092 0.908 29 H 0.096 0.904 30 H 0.095 0.905 31 H 0.084 0.916 32 H 0.410 0.590 33 H 0.136 0.864 34 H 0.167 0.833 35 H 0.176 0.824 36 H 0.175 0.825 37 H 0.092 0.908 38 H 0.374 0.626 39 H -0.255 1.255 40 H -0.260 1.260 41 H 0.082 0.918 42 H 0.091 0.909 43 H 0.091 0.909 44 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 22.409 24.427 18.860 38.138 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.266 0.734 4 H 0.262 0.738 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.176 4.176 8 C -0.166 4.166 9 C 0.045 3.955 10 H 0.108 0.892 11 N -0.348 5.348 12 C 0.197 3.803 13 C -0.335 4.335 14 C 0.019 3.981 15 N -0.244 5.244 16 C 0.169 3.831 17 C -0.074 4.074 18 C -0.339 4.339 19 S 0.483 5.517 20 C -0.372 4.372 21 C -0.058 4.058 22 C -0.147 4.147 23 O -0.329 6.329 24 Si 0.564 3.436 25 N -0.294 5.294 26 C -0.177 4.177 27 C -0.178 4.178 28 H 0.111 0.889 29 H 0.115 0.885 30 H 0.114 0.886 31 H 0.103 0.897 32 H 0.247 0.753 33 H 0.154 0.846 34 H 0.184 0.816 35 H 0.193 0.807 36 H 0.192 0.808 37 H 0.109 0.891 38 H 0.221 0.779 39 H -0.180 1.180 40 H -0.185 1.185 41 H 0.101 0.899 42 H 0.109 0.891 43 H 0.110 0.890 44 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 22.190 22.834 16.097 35.678 hybrid contribution 0.709 0.702 3.485 3.625 sum 22.899 23.536 19.582 38.233 Atomic orbital electron populations 1.42644 1.21245 1.20722 1.18777 0.73381 0.73356 0.73756 1.23586 0.99609 0.97463 0.87368 0.83809 1.22021 1.02898 0.90806 1.01831 1.21747 0.94297 1.03167 0.97344 1.21015 0.93345 0.91908 0.89225 0.89185 1.44270 1.15031 1.59062 1.16474 1.18299 0.85794 0.87147 0.89107 1.22070 0.98756 1.12711 0.99933 1.23001 0.92525 0.87205 0.95418 1.68631 1.35560 1.20095 1.00127 1.20433 0.83792 0.87971 0.90898 1.16813 0.94692 1.04266 0.91597 1.25295 1.05537 1.05268 0.97837 1.83379 1.05720 1.48794 1.13763 1.25614 1.04722 1.08797 0.98047 1.18200 0.94600 0.98559 0.94426 1.24342 1.03426 0.96863 0.90090 1.86559 1.51827 1.61723 1.32822 0.95573 0.75970 0.86049 0.86036 1.67814 1.17160 1.16257 1.28200 1.22074 1.03434 0.95411 0.96803 1.22060 0.89405 1.04204 1.02125 0.88915 0.88532 0.88638 0.89703 0.75331 0.84627 0.81615 0.80699 0.80809 0.89051 0.77856 1.17986 1.18465 0.89940 0.89067 0.89047 0.88753 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.54 4.15 -4.67 -0.02 24.52 16 2 H 0.44 -17.50 8.96 -39.29 -0.35 -17.85 16 3 H 0.44 -17.47 8.96 -39.29 -0.35 -17.83 16 4 H 0.43 -17.17 8.90 -39.29 -0.35 -17.52 16 5 C 0.02 -0.77 3.03 -67.71 -0.20 -0.97 16 6 H 0.14 -4.69 8.14 -51.93 -0.42 -5.11 16 7 C -0.14 3.98 5.43 -26.73 -0.15 3.83 16 8 C -0.13 2.99 5.39 -26.73 -0.14 2.85 16 9 C 0.15 -3.17 2.15 -67.93 -0.15 -3.32 16 10 H 0.09 -1.87 6.50 -51.93 -0.34 -2.21 16 11 N -0.71 11.09 5.23 -53.79 -0.28 10.80 16 12 C 0.44 -4.79 7.69 -154.86 -1.19 -5.98 16 13 C -0.31 3.73 8.93 -39.05 -0.35 3.38 16 14 C 0.18 -1.79 11.28 -17.32 -0.20 -1.99 16 15 N -0.53 3.33 6.55 -11.26 -0.07 3.26 16 16 C 0.44 -2.31 7.58 -156.89 -1.19 -3.50 16 17 C -0.06 0.28 5.80 -106.64 -0.62 -0.34 16 18 C -0.20 1.24 10.42 29.43 0.31 1.54 16 19 S 0.22 -1.50 23.09 -107.50 -2.48 -3.98 16 20 C -0.24 1.38 9.67 28.95 0.28 1.66 16 21 C -0.05 0.22 5.23 -105.87 -0.55 -0.33 16 22 C -0.03 0.19 1.80 36.01 0.06 0.26 16 23 O -0.52 2.42 12.09 -35.23 -0.43 1.99 16 24 Si 0.66 -4.18 30.49 -169.99 -5.18 -9.36 16 25 N -0.57 4.05 9.85 -10.41 -0.10 3.95 16 26 C -0.14 3.14 5.46 -26.73 -0.15 2.99 16 27 C -0.14 4.00 5.43 -26.73 -0.15 3.86 16 28 H 0.09 -2.70 8.14 -51.93 -0.42 -3.13 16 29 H 0.10 -2.85 8.14 -51.93 -0.42 -3.27 16 30 H 0.10 -2.01 8.14 -51.93 -0.42 -2.43 16 31 H 0.08 -1.98 8.14 -51.93 -0.42 -2.40 16 32 H 0.41 -6.28 8.73 -40.82 -0.36 -6.63 16 33 H 0.14 -2.19 6.29 -52.49 -0.33 -2.52 16 34 H 0.17 -2.11 8.06 -52.49 -0.42 -2.53 16 35 H 0.18 -1.31 7.90 -52.49 -0.41 -1.72 16 36 H 0.17 -1.21 5.79 -52.48 -0.30 -1.52 16 37 H 0.09 -0.58 6.37 -51.93 -0.33 -0.91 16 38 H 0.37 -3.05 8.74 45.56 0.40 -2.65 16 39 H -0.26 0.86 6.92 56.52 0.39 1.25 16 40 H -0.26 1.07 7.11 56.52 0.40 1.48 16 41 H 0.08 -1.81 8.14 -51.93 -0.42 -2.23 16 42 H 0.09 -1.80 7.75 -51.93 -0.40 -2.20 16 43 H 0.09 -2.66 8.14 -51.93 -0.42 -3.08 16 44 H 0.09 -2.74 8.14 -51.93 -0.42 -3.16 16 LS Contribution 358.86 15.07 5.41 5.41 Total: 1.00 -43.99 358.86 -13.68 -57.67 By element: Atomic # 1 Polarization: -92.05 SS G_CDS: -6.14 Total: -98.19 kcal Atomic # 6 Polarization: 8.32 SS G_CDS: -4.37 Total: 3.94 kcal Atomic # 7 Polarization: 43.00 SS G_CDS: -0.48 Total: 42.53 kcal Atomic # 8 Polarization: 2.42 SS G_CDS: -0.43 Total: 1.99 kcal Atomic # 14 Polarization: -4.18 SS G_CDS: -5.18 Total: -9.36 kcal Atomic # 16 Polarization: -1.50 SS G_CDS: -2.48 Total: -3.98 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -43.99 -13.68 -57.67 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081482_17085348.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 237.772 kcal (2) G-P(sol) polarization free energy of solvation -43.987 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 193.785 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.679 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -57.666 kcal (6) G-S(sol) free energy of system = (1) + (5) 180.106 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds