Wall clock time and date at job start Mon Mar 8 2021 07:55:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00902 * 1 3 3 H 1.00900 * 109.46817 * 1 2 4 4 H 1.00906 * 109.46761 * 240.00384 * 1 2 3 5 5 C 1.46894 * 109.47634 * 120.00075 * 1 2 3 6 6 H 1.08996 * 109.47080 * 299.99900 * 5 1 2 7 7 C 1.53005 * 109.46816 * 60.00202 * 5 1 2 8 8 C 1.53005 * 109.46819 * 179.97438 * 7 5 1 9 9 C 1.52997 * 109.47290 * 300.00210 * 8 7 5 10 10 H 1.09005 * 109.47000 * 299.99862 * 9 8 7 11 11 N 1.46499 * 109.47145 * 180.02562 * 9 8 7 12 12 C 1.38552 * 120.00014 * 154.99584 * 11 9 8 13 13 C 1.39702 * 120.47396 * 359.97438 * 12 11 9 14 14 C 1.38206 * 118.52210 * 180.02562 * 13 12 11 15 15 N 1.32393 * 119.31457 * 359.74855 * 14 13 12 16 16 C 1.32714 * 120.91655 * 0.51512 * 15 14 13 17 17 C 1.48045 * 119.20053 * 179.75682 * 16 15 14 18 18 C 1.34570 * 122.87185 * 179.97438 * 17 16 15 19 19 S 1.70626 * 110.51316 * 180.28366 * 18 17 16 20 20 C 1.75731 * 91.70358 * 359.72570 * 19 18 17 21 21 C 1.33110 * 109.77699 * 0.02562 * 20 19 18 22 22 C 1.50706 * 123.12689 * 179.97438 * 21 20 19 23 23 O 1.42906 * 109.46702 * 105.02463 * 22 21 20 24 24 Si 1.86301 * 109.47233 * 345.02752 * 22 21 20 25 25 N 1.32678 * 121.59886 * 359.46861 * 16 15 14 26 26 C 1.52996 * 109.47253 * 59.99944 * 9 8 7 27 27 C 1.53000 * 109.46965 * 299.99699 * 26 9 8 28 28 H 1.08996 * 109.47543 * 59.99981 * 7 5 1 29 29 H 1.09000 * 109.46822 * 299.99445 * 7 5 1 30 30 H 1.09003 * 109.47035 * 179.97438 * 8 7 5 31 31 H 1.09005 * 109.46986 * 60.00080 * 8 7 5 32 32 H 0.96996 * 119.99762 * 335.00249 * 11 9 8 33 33 H 1.07996 * 120.73619 * 0.02562 * 13 12 11 34 34 H 1.07999 * 120.34048 * 180.02562 * 14 13 12 35 35 H 1.08002 * 124.73987 * 359.97438 * 18 17 16 36 36 H 1.08003 * 125.11107 * 179.97438 * 20 19 18 37 37 H 1.09000 * 109.47318 * 225.02042 * 22 21 20 38 38 H 0.96698 * 113.99410 * 179.97438 * 23 22 21 39 39 H 1.48497 * 109.99842 * 59.99960 * 24 22 21 40 40 H 1.48502 * 109.99925 * 181.31722 * 24 22 21 41 41 H 1.08996 * 109.47451 * 60.00114 * 26 9 8 42 42 H 1.09005 * 109.47083 * 180.02562 * 26 9 8 43 43 H 1.08995 * 109.47896 * 300.00473 * 27 26 9 44 44 H 1.09003 * 109.46981 * 180.02562 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3363 0.9513 0.0000 4 1 -0.3363 -0.4756 0.8239 5 6 -0.4898 -0.6925 -1.1993 6 1 -0.1265 -0.1787 -2.0893 7 6 0.0202 -2.1350 -1.1993 8 6 -0.4905 -2.8565 -2.4482 9 6 -2.0205 -2.8563 -2.4475 10 1 -2.3834 -3.3700 -1.5572 11 7 -2.5094 -3.5477 -3.6430 12 6 -3.7656 -4.1321 -3.6402 13 6 -4.5740 -4.0686 -2.5026 14 6 -5.8197 -4.6659 -2.5441 15 7 -6.2111 -5.2725 -3.6539 16 6 -5.4207 -5.3224 -4.7188 17 6 -5.8946 -6.0154 -5.9382 18 6 -5.1552 -6.1098 -7.0586 19 16 -6.0063 -6.9632 -8.2664 20 6 -7.3873 -7.1936 -7.2043 21 6 -7.1456 -6.6303 -6.0227 22 6 -8.1327 -6.6493 -4.8840 23 8 -7.7054 -7.5924 -3.8991 24 14 -9.8117 -7.1390 -5.5257 25 7 -4.2183 -4.7614 -4.7191 26 6 -2.5304 -1.4138 -2.4475 27 6 -2.0198 -0.6925 -1.1986 28 1 -0.3431 -2.6488 -0.3093 29 1 1.1102 -2.1350 -1.1994 30 1 -0.1268 -3.8841 -2.4484 31 1 -0.1275 -2.3428 -3.3384 32 1 -1.9536 -3.5963 -4.4364 33 1 -4.2332 -3.5640 -1.6107 34 1 -6.4689 -4.6341 -1.6816 35 1 -4.1639 -5.6983 -7.1784 36 1 -8.2958 -7.7134 -7.4705 37 1 -8.1899 -5.6571 -4.4363 38 1 -8.2947 -7.6573 -3.1351 39 1 -9.7469 -8.4901 -6.1385 40 1 -10.8010 -7.1306 -4.4181 41 1 -2.1674 -0.9002 -3.3377 42 1 -3.6204 -1.4138 -2.4466 43 1 -2.3827 -1.2061 -0.3084 44 1 -2.3835 0.3351 -1.1984 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_273584_18081482_17085348.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:55:33 Heat of formation + Delta-G solvation = 146.198124 kcal Electronic energy + Delta-G solvation = -26438.289562 eV Core-core repulsion = 22794.584065 eV Total energy + Delta-G solvation = -3643.705497 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.133 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -42.08077 -41.08802 -39.71216 -38.20067 -37.13255 -35.53549 -33.99626 -32.18078 -31.92928 -31.00010 -28.97908 -27.64231 -25.70314 -24.68215 -24.02828 -23.51234 -22.63869 -21.42132 -20.11509 -19.23229 -18.70551 -18.42833 -18.38825 -18.32640 -17.99081 -17.44713 -16.66506 -16.40036 -16.28525 -16.13572 -15.47313 -15.36382 -15.18024 -14.79222 -14.55113 -14.33601 -14.20761 -14.11692 -13.84671 -13.73369 -13.53908 -13.40893 -12.83520 -12.68946 -12.59825 -12.32901 -12.24164 -12.10572 -11.79570 -11.68198 -11.54249 -11.40091 -11.10005 -10.47546 -9.93920 -9.86500 -9.44752 -9.02407 -4.93777 -0.50342 0.20185 0.44132 0.57293 0.88649 1.34202 1.53291 1.55698 1.57108 1.91757 1.94937 3.00671 3.04491 3.10754 3.24557 3.40848 3.60983 3.65256 3.66347 3.76768 3.86553 3.94518 3.95456 4.08198 4.10487 4.13239 4.29296 4.35468 4.39697 4.43471 4.48114 4.55823 4.61264 4.62806 4.66730 4.69284 4.82656 4.88670 4.99459 5.04502 5.08002 5.12164 5.19300 5.23498 5.31258 5.40122 5.82290 6.17717 6.55426 6.71518 7.27897 Molecular weight = 334.13amu Principal moments of inertia in cm(-1) A = 0.021360 B = 0.002819 C = 0.002581 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1310.543760 B = 9928.868032 C =10845.459695 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.618 5.618 2 H 0.450 0.550 3 H 0.450 0.550 4 H 0.444 0.556 5 C 0.050 3.950 6 H 0.149 0.851 7 C -0.134 4.134 8 C -0.127 4.127 9 C 0.142 3.858 10 H 0.091 0.909 11 N -0.708 5.708 12 C 0.425 3.575 13 C -0.289 4.289 14 C 0.159 3.841 15 N -0.552 5.552 16 C 0.406 3.594 17 C -0.076 4.076 18 C -0.207 4.207 19 S 0.239 5.761 20 C -0.248 4.248 21 C -0.064 4.064 22 C -0.037 4.037 23 O -0.542 6.542 24 Si 0.739 3.261 25 N -0.597 5.597 26 C -0.137 4.137 27 C -0.136 4.136 28 H 0.101 0.899 29 H 0.111 0.889 30 H 0.065 0.935 31 H 0.080 0.920 32 H 0.406 0.594 33 H 0.175 0.825 34 H 0.191 0.809 35 H 0.180 0.820 36 H 0.181 0.819 37 H 0.095 0.905 38 H 0.386 0.614 39 H -0.295 1.295 40 H -0.287 1.287 41 H 0.071 0.929 42 H 0.058 0.942 43 H 0.103 0.897 44 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 24.468 26.950 21.295 42.172 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.020 5.020 2 H 0.282 0.718 3 H 0.281 0.719 4 H 0.274 0.726 5 C -0.056 4.056 6 H 0.167 0.833 7 C -0.172 4.172 8 C -0.166 4.166 9 C 0.038 3.962 10 H 0.109 0.891 11 N -0.340 5.340 12 C 0.180 3.820 13 C -0.317 4.317 14 C -0.003 4.003 15 N -0.271 5.271 16 C 0.138 3.862 17 C -0.092 4.092 18 C -0.347 4.347 19 S 0.507 5.493 20 C -0.383 4.383 21 C -0.077 4.077 22 C -0.149 4.149 23 O -0.351 6.351 24 Si 0.644 3.356 25 N -0.322 5.322 26 C -0.176 4.176 27 C -0.174 4.174 28 H 0.119 0.881 29 H 0.129 0.871 30 H 0.084 0.916 31 H 0.099 0.901 32 H 0.242 0.758 33 H 0.192 0.808 34 H 0.207 0.793 35 H 0.198 0.802 36 H 0.198 0.802 37 H 0.113 0.887 38 H 0.235 0.765 39 H -0.223 1.223 40 H -0.214 1.214 41 H 0.089 0.911 42 H 0.076 0.924 43 H 0.121 0.879 44 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 24.305 25.426 18.597 39.788 hybrid contribution 0.191 -0.054 2.793 2.800 sum 24.496 25.372 21.390 41.247 Atomic orbital electron populations 1.42237 1.22107 1.20932 1.16705 0.71828 0.71857 0.72573 1.22861 0.96700 0.95944 0.90104 0.83307 1.21952 1.03690 0.92600 0.99003 1.21714 0.92077 1.02415 1.00412 1.21471 0.95250 0.92558 0.86902 0.89066 1.44717 1.13207 1.57986 1.18085 1.18767 0.87428 0.86944 0.88818 1.22411 0.97496 1.11086 1.00668 1.23521 0.93991 0.87434 0.95315 1.68551 1.36195 1.21461 1.00894 1.20443 0.84908 0.89547 0.91280 1.17111 0.94978 1.04546 0.92525 1.25409 1.05824 1.05503 0.97940 1.83157 1.04845 1.48293 1.12965 1.25791 1.05454 1.08780 0.98274 1.18401 0.95100 0.99192 0.94962 1.24475 1.03593 0.96929 0.89872 1.86523 1.52843 1.62051 1.33643 0.94729 0.73956 0.83254 0.83631 1.67782 1.16966 1.17415 1.30039 1.21959 1.01438 0.94501 0.99747 1.21969 0.92244 1.04024 0.99210 0.88061 0.87112 0.91588 0.90096 0.75802 0.80751 0.79266 0.80220 0.80166 0.88697 0.76494 1.22254 1.21361 0.91052 0.92360 0.87887 0.87569 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.62 48.87 4.15 -168.68 -0.70 48.17 16 2 H 0.45 -37.04 8.96 -89.69 -0.80 -37.84 16 3 H 0.45 -36.94 8.96 -89.69 -0.80 -37.75 16 4 H 0.44 -36.15 8.90 -89.69 -0.80 -36.95 16 5 C 0.05 -3.32 3.03 44.92 0.14 -3.18 16 6 H 0.15 -9.90 8.14 -2.39 -0.02 -9.92 16 7 C -0.13 7.85 5.43 30.60 0.17 8.02 16 8 C -0.13 5.80 5.39 30.60 0.16 5.97 16 9 C 0.14 -5.70 2.15 44.99 0.10 -5.60 16 10 H 0.09 -3.70 6.50 -2.38 -0.02 -3.71 16 11 N -0.71 19.87 5.23 -324.11 -1.69 18.18 16 12 C 0.43 -7.95 7.69 133.22 1.02 -6.93 16 13 C -0.29 6.46 8.93 22.62 0.20 6.66 16 14 C 0.16 -2.75 11.28 84.60 0.95 -1.79 16 15 N -0.55 5.12 6.55 -189.53 -1.24 3.88 16 16 C 0.41 -2.72 7.58 137.39 1.04 -1.68 16 17 C -0.08 0.44 5.80 -21.17 -0.12 0.31 16 18 C -0.21 1.85 10.42 66.98 0.70 2.55 16 19 S 0.24 -2.72 23.09 -56.49 -1.30 -4.02 16 20 C -0.25 2.16 9.67 66.67 0.64 2.81 16 21 C -0.06 0.41 5.23 -20.67 -0.11 0.30 16 22 C -0.04 0.31 1.80 71.24 0.13 0.43 16 23 O -0.54 3.35 12.09 -148.98 -1.80 1.54 16 24 Si 0.74 -7.48 30.49 68.60 2.09 -5.39 16 25 N -0.60 6.16 9.85 -186.85 -1.84 4.32 16 26 C -0.14 6.04 5.46 30.59 0.17 6.20 16 27 C -0.14 7.90 5.43 30.60 0.17 8.06 16 28 H 0.10 -6.02 8.14 -2.39 -0.02 -6.04 16 29 H 0.11 -6.68 8.14 -2.39 -0.02 -6.70 16 30 H 0.07 -2.58 8.14 -2.39 -0.02 -2.60 16 31 H 0.08 -3.61 8.14 -2.38 -0.02 -3.63 16 32 H 0.41 -10.98 8.73 -92.71 -0.81 -11.79 16 33 H 0.18 -5.54 6.29 -2.91 -0.02 -5.56 16 34 H 0.19 -4.53 8.06 -2.91 -0.02 -4.55 16 35 H 0.18 -2.01 7.90 -2.91 -0.02 -2.03 16 36 H 0.18 -2.02 5.79 -2.91 -0.02 -2.04 16 37 H 0.10 -0.90 6.37 -2.39 -0.02 -0.92 16 38 H 0.39 -5.21 8.74 -74.06 -0.65 -5.86 16 39 H -0.30 1.08 6.92 99.48 0.69 1.76 16 40 H -0.29 1.70 7.11 99.48 0.71 2.41 16 41 H 0.07 -2.97 8.14 -2.39 -0.02 -2.99 16 42 H 0.06 -2.15 7.75 -2.38 -0.02 -2.17 16 43 H 0.10 -6.14 8.14 -2.39 -0.02 -6.16 16 44 H 0.11 -6.29 8.14 -2.39 -0.02 -6.31 16 Total: 1.00 -98.66 358.86 -3.89 -102.55 By element: Atomic # 1 Polarization: -188.61 SS G_CDS: -2.75 Total: -191.36 kcal Atomic # 6 Polarization: 16.78 SS G_CDS: 5.36 Total: 22.14 kcal Atomic # 7 Polarization: 80.01 SS G_CDS: -5.48 Total: 74.54 kcal Atomic # 8 Polarization: 3.35 SS G_CDS: -1.80 Total: 1.54 kcal Atomic # 14 Polarization: -7.48 SS G_CDS: 2.09 Total: -5.39 kcal Atomic # 16 Polarization: -2.72 SS G_CDS: -1.30 Total: -4.02 kcal Total: -98.66 -3.89 -102.55 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081482_17085348.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 248.749 kcal (2) G-P(sol) polarization free energy of solvation -98.663 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 150.085 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.887 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -102.550 kcal (6) G-S(sol) free energy of system = (1) + (5) 146.198 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds