Wall clock time and date at job start Mon Mar 8 2021 08:04:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00902 * 1 3 3 H 1.00900 * 109.46225 * 1 2 4 4 H 1.00901 * 109.47319 * 240.00672 * 1 2 3 5 5 C 1.46894 * 109.47058 * 120.00288 * 1 2 3 6 6 H 1.09002 * 109.47104 * 300.00187 * 5 1 2 7 7 C 1.52997 * 109.47515 * 60.00455 * 5 1 2 8 8 C 1.53000 * 109.47060 * 180.02562 * 7 5 1 9 9 C 1.53002 * 109.47233 * 299.99657 * 8 7 5 10 10 H 1.09002 * 109.47075 * 300.00932 * 9 8 7 11 11 N 1.46492 * 109.47204 * 180.02562 * 9 8 7 12 12 C 1.38419 * 119.99895 * 155.00052 * 11 9 8 13 13 N 1.32360 * 119.15287 * 179.72796 * 12 11 9 14 14 C 1.33211 * 120.58541 * 179.76512 * 13 12 11 15 15 C 1.48059 * 120.51960 * 180.25535 * 14 13 12 16 16 C 1.34574 * 122.86916 * 179.97438 * 15 14 13 17 17 S 1.70630 * 110.50739 * 179.89202 * 16 15 14 18 18 C 1.75725 * 91.70573 * 0.31243 * 17 16 15 19 19 C 1.33110 * 109.77858 * 359.82449 * 18 17 16 20 20 C 1.50705 * 123.12843 * 179.97438 * 19 18 17 21 21 O 1.42896 * 109.47093 * 105.02039 * 20 19 18 22 22 Si 1.86297 * 109.47277 * 345.02086 * 20 19 18 23 23 C 1.39889 * 118.96590 * 0.49921 * 14 13 12 24 24 C 1.38215 * 118.44280 * 359.75572 * 23 14 13 25 25 N 1.32431 * 119.31231 * 359.97438 * 24 23 14 26 26 C 1.52997 * 109.46817 * 60.00194 * 9 8 7 27 27 C 1.52999 * 109.46927 * 180.02562 * 5 1 2 28 28 H 1.09002 * 109.47153 * 59.99762 * 7 5 1 29 29 H 1.09001 * 109.46832 * 299.99953 * 7 5 1 30 30 H 1.08992 * 109.47399 * 59.99823 * 8 7 5 31 31 H 1.09004 * 109.46724 * 180.02562 * 8 7 5 32 32 H 0.96998 * 120.00353 * 335.00390 * 11 9 8 33 33 H 1.07998 * 124.74566 * 0.02562 * 16 15 14 34 34 H 1.08006 * 125.11027 * 179.80198 * 18 17 16 35 35 H 1.09004 * 109.47058 * 225.01839 * 20 19 18 36 36 H 0.96703 * 114.00102 * 300.00081 * 21 20 19 37 37 H 1.48491 * 110.00053 * 180.02562 * 22 20 19 38 38 H 1.48508 * 109.99627 * 301.32002 * 22 20 19 39 39 H 1.08004 * 120.77665 * 179.77366 * 23 14 13 40 40 H 1.08011 * 120.34347 * 179.97438 * 24 23 14 41 41 H 1.09002 * 109.47153 * 60.00231 * 26 9 8 42 42 H 1.09001 * 109.47289 * 180.02562 * 26 9 8 43 43 H 1.09000 * 109.47486 * 59.99528 * 27 5 1 44 44 H 1.09002 * 109.46716 * 299.99610 * 27 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3362 0.9514 0.0000 4 1 -0.3364 -0.4755 0.8239 5 6 -0.4896 -0.6925 -1.1994 6 1 -0.1263 -0.1787 -2.0894 7 6 0.0202 -2.1350 -1.1993 8 6 -0.4893 -2.8561 -2.4489 9 6 -2.0193 -2.8560 -2.4495 10 1 -2.3830 -3.3698 -1.5597 11 7 -2.5071 -3.5469 -3.6456 12 6 -3.7622 -4.1308 -3.6442 13 7 -4.1884 -4.7460 -4.7358 14 6 -5.3894 -5.3217 -4.7643 15 6 -5.8624 -6.0144 -5.9843 16 6 -7.0656 -6.6117 -6.0650 17 16 -7.2858 -7.3064 -7.6079 18 6 -5.6969 -6.7709 -8.1337 19 6 -5.0957 -6.1088 -7.1478 20 6 -3.7157 -5.5167 -7.2750 21 8 -3.8173 -4.0986 -7.4190 22 14 -2.8677 -6.2336 -8.7708 23 6 -6.1988 -5.2570 -3.6252 24 6 -5.7146 -4.5996 -2.5100 25 7 -4.5082 -4.0550 -2.5513 26 6 -2.5292 -1.4135 -2.4496 27 6 -2.0196 -0.6920 -1.1996 28 1 -0.3431 -2.6488 -0.3093 29 1 1.1102 -2.1351 -1.1993 30 1 -0.1256 -2.3422 -3.3386 31 1 -0.1264 -3.8839 -2.4486 32 1 -1.9507 -3.5953 -4.4387 33 1 -7.7912 -6.6448 -5.2658 34 1 -5.2719 -6.9521 -9.1099 35 1 -3.1362 -5.7506 -6.3818 36 1 -4.3212 -3.8172 -8.1949 37 1 -1.5056 -5.6582 -8.9071 38 1 -2.7843 -7.7113 -8.6478 39 1 -7.1791 -5.7104 -3.6174 40 1 -6.3139 -4.5309 -1.6140 41 1 -2.1654 -0.8996 -3.3394 42 1 -3.6192 -1.4134 -2.4496 43 1 -2.3826 0.3358 -1.1998 44 1 -2.3832 -1.2056 -0.3096 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081482_17085550.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:04:47 Heat of formation + Delta-G solvation = 177.873747 kcal Electronic energy + Delta-G solvation = -26826.519087 eV Core-core repulsion = 23184.187148 eV Total energy + Delta-G solvation = -3642.331939 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.133 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -43.45317 -42.72900 -40.63887 -39.72294 -37.65704 -36.52964 -35.28128 -33.90470 -33.38580 -31.59370 -30.33491 -28.35774 -26.53377 -26.11888 -25.60470 -25.01402 -23.61084 -23.15705 -21.35178 -21.16859 -20.90562 -20.15696 -19.88545 -19.69108 -18.63938 -17.91243 -17.86891 -17.48756 -17.36198 -17.05643 -16.80739 -16.66342 -16.45980 -16.06922 -15.83568 -15.55912 -15.28364 -15.23734 -14.86966 -14.73544 -14.63467 -14.46282 -14.40575 -14.23031 -14.10651 -13.56627 -13.26267 -13.11686 -12.77460 -12.62262 -12.53685 -12.38243 -12.21155 -11.06665 -10.66729 -10.56221 -10.21999 -9.81014 -5.63088 -1.20898 -1.16656 -0.51484 -0.41531 -0.11220 0.22366 0.70332 0.72784 0.74355 0.81069 0.89322 0.92884 1.07094 1.38594 1.53271 1.62871 1.72322 2.06071 2.11488 2.24046 2.33455 2.34467 2.43799 2.51850 2.56797 2.72140 2.79546 2.92662 2.98520 3.01894 3.02999 3.24972 3.26309 3.36201 3.39909 3.46901 3.49920 3.64429 3.72401 3.80994 3.85056 4.04852 4.17662 4.38830 4.52100 4.61334 5.00132 5.21372 5.58240 6.07195 6.54247 Molecular weight = 334.13amu Principal moments of inertia in cm(-1) A = 0.017713 B = 0.003334 C = 0.002919 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1580.340201 B = 8395.727504 C = 9588.514249 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.436 0.564 3 H 0.437 0.563 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.143 0.857 7 C -0.135 4.135 8 C -0.129 4.129 9 C 0.162 3.838 10 H 0.096 0.904 11 N -0.700 5.700 12 C 0.565 3.435 13 N -0.538 5.538 14 C 0.287 3.713 15 C -0.067 4.067 16 C -0.222 4.222 17 S 0.224 5.776 18 C -0.236 4.236 19 C -0.099 4.099 20 C -0.022 4.022 21 O -0.526 6.526 22 Si 0.664 3.336 23 C -0.275 4.275 24 C 0.192 3.808 25 N -0.578 5.578 26 C -0.130 4.130 27 C -0.137 4.137 28 H 0.092 0.908 29 H 0.094 0.906 30 H 0.082 0.918 31 H 0.092 0.908 32 H 0.416 0.584 33 H 0.173 0.827 34 H 0.176 0.824 35 H 0.125 0.875 36 H 0.370 0.630 37 H -0.255 1.255 38 H -0.257 1.257 39 H 0.144 0.856 40 H 0.169 0.831 41 H 0.075 0.925 42 H 0.090 0.910 43 H 0.091 0.909 44 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 14.174 18.594 18.885 30.055 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.033 5.033 2 H 0.265 0.735 3 H 0.266 0.734 4 H 0.262 0.738 5 C -0.080 4.080 6 H 0.161 0.839 7 C -0.174 4.174 8 C -0.168 4.168 9 C 0.055 3.945 10 H 0.114 0.886 11 N -0.338 5.338 12 C 0.208 3.792 13 N -0.260 5.260 14 C 0.138 3.862 15 C -0.082 4.082 16 C -0.361 4.361 17 S 0.493 5.507 18 C -0.372 4.372 19 C -0.111 4.111 20 C -0.136 4.136 21 O -0.329 6.329 22 Si 0.566 3.434 23 C -0.301 4.301 24 C 0.026 3.974 25 N -0.302 5.302 26 C -0.169 4.169 27 C -0.176 4.176 28 H 0.110 0.890 29 H 0.112 0.888 30 H 0.100 0.900 31 H 0.111 0.889 32 H 0.254 0.746 33 H 0.191 0.809 34 H 0.193 0.807 35 H 0.142 0.858 36 H 0.216 0.784 37 H -0.180 1.180 38 H -0.181 1.181 39 H 0.162 0.838 40 H 0.186 0.814 41 H 0.094 0.906 42 H 0.109 0.891 43 H 0.109 0.891 44 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 14.887 17.649 18.343 29.488 hybrid contribution 0.372 0.492 1.306 1.444 sum 15.259 18.141 19.648 30.789 Atomic orbital electron populations 1.42656 1.21116 1.20684 1.18886 0.73515 0.73442 0.73783 1.23604 0.99836 0.97407 0.87169 0.83916 1.21996 1.02590 0.90853 1.01939 1.21782 0.95059 1.02824 0.97112 1.20864 0.92090 0.91943 0.89575 0.88556 1.43872 1.14017 1.59190 1.16679 1.19173 0.87093 0.87903 0.85029 1.68029 1.16562 1.14869 1.26516 1.19354 0.87567 0.88070 0.91164 1.17210 0.94299 1.03350 0.93358 1.25311 1.01309 1.04979 1.04501 1.83479 1.13618 1.50939 1.02704 1.25643 0.99965 1.07576 1.03975 1.19401 0.98819 1.00331 0.92503 1.24689 0.94880 0.85232 1.08813 1.86536 1.76885 1.19020 1.50503 0.95330 0.83058 0.80443 0.84535 1.22514 1.03699 1.08352 0.95547 1.22787 0.89654 0.87599 0.97340 1.67817 1.08050 1.26635 1.27684 1.21977 1.03507 0.95425 0.96033 1.22057 0.89094 1.03926 1.02512 0.88965 0.88772 0.89950 0.88942 0.74632 0.80946 0.80733 0.85828 0.78421 1.17957 1.18121 0.83805 0.81387 0.90609 0.89121 0.89086 0.89033 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 23.55 4.15 -4.67 -0.02 23.53 16 2 H 0.44 -16.87 8.96 -39.29 -0.35 -17.22 16 3 H 0.44 -16.82 8.96 -39.29 -0.35 -17.17 16 4 H 0.43 -16.48 8.90 -39.29 -0.35 -16.83 16 5 C 0.02 -0.72 3.02 -67.72 -0.20 -0.93 16 6 H 0.14 -4.40 8.14 -51.93 -0.42 -4.82 16 7 C -0.14 3.66 5.43 -26.73 -0.15 3.52 16 8 C -0.13 2.77 5.39 -26.73 -0.14 2.62 16 9 C 0.16 -2.92 2.45 -67.94 -0.17 -3.09 16 10 H 0.10 -1.61 7.50 -51.93 -0.39 -2.00 16 11 N -0.70 9.20 5.22 -55.82 -0.29 8.91 16 12 C 0.57 -5.18 8.40 -322.91 -2.71 -7.89 16 13 N -0.54 3.86 6.78 -10.48 -0.07 3.79 16 14 C 0.29 -2.01 6.77 -82.62 -0.56 -2.57 16 15 C -0.07 0.48 5.80 -106.64 -0.62 -0.14 16 16 C -0.22 1.88 10.26 29.44 0.30 2.18 16 17 S 0.22 -1.98 23.09 -107.50 -2.48 -4.46 16 18 C -0.24 2.04 9.67 28.95 0.28 2.32 16 19 C -0.10 0.74 5.20 -105.88 -0.55 0.19 16 20 C -0.02 0.17 1.82 36.01 0.07 0.24 16 21 O -0.53 4.26 12.13 -35.23 -0.43 3.83 16 22 Si 0.66 -5.46 30.37 -169.99 -5.16 -10.62 16 23 C -0.28 2.43 9.58 -38.97 -0.37 2.06 16 24 C 0.19 -1.89 11.28 -17.30 -0.20 -2.09 16 25 N -0.58 5.60 9.19 -14.01 -0.13 5.47 16 26 C -0.13 2.58 5.51 -26.70 -0.15 2.43 16 27 C -0.14 3.61 5.44 -26.70 -0.15 3.46 16 28 H 0.09 -2.50 8.14 -51.93 -0.42 -2.92 16 29 H 0.09 -2.63 8.14 -51.93 -0.42 -3.05 16 30 H 0.08 -1.75 8.14 -51.93 -0.42 -2.18 16 31 H 0.09 -1.77 8.14 -51.93 -0.42 -2.19 16 32 H 0.42 -5.43 8.72 -40.82 -0.36 -5.78 16 33 H 0.17 -1.82 6.84 -52.49 -0.36 -2.18 16 34 H 0.18 -1.87 5.91 -52.48 -0.31 -2.18 16 35 H 0.12 -0.81 6.45 -51.93 -0.34 -1.15 16 36 H 0.37 -4.11 8.70 45.56 0.40 -3.71 16 37 H -0.25 1.33 7.11 56.52 0.40 1.74 16 38 H -0.26 1.33 7.11 56.52 0.40 1.73 16 39 H 0.14 -1.55 6.71 -52.48 -0.35 -1.90 16 40 H 0.17 -2.16 8.06 -52.48 -0.42 -2.58 16 41 H 0.08 -1.46 8.14 -51.93 -0.42 -1.88 16 42 H 0.09 -1.44 8.14 -51.93 -0.42 -1.86 16 43 H 0.09 -2.44 8.14 -51.93 -0.42 -2.86 16 44 H 0.09 -2.40 8.14 -51.93 -0.42 -2.82 16 LS Contribution 360.16 15.07 5.43 5.43 Total: 1.00 -40.98 360.16 -14.65 -55.63 By element: Atomic # 1 Polarization: -87.64 SS G_CDS: -6.18 Total: -93.83 kcal Atomic # 6 Polarization: 7.63 SS G_CDS: -5.31 Total: 2.32 kcal Atomic # 7 Polarization: 42.20 SS G_CDS: -0.51 Total: 41.69 kcal Atomic # 8 Polarization: 4.26 SS G_CDS: -0.43 Total: 3.83 kcal Atomic # 14 Polarization: -5.46 SS G_CDS: -5.16 Total: -10.62 kcal Atomic # 16 Polarization: -1.98 SS G_CDS: -2.48 Total: -4.46 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -40.98 -14.65 -55.63 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081482_17085550.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 233.506 kcal (2) G-P(sol) polarization free energy of solvation -40.978 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 192.528 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.654 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -55.632 kcal (6) G-S(sol) free energy of system = (1) + (5) 177.874 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds