Wall clock time and date at job start Mon Mar 8 2021 08:29:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00901 * 1 3 3 H 1.00900 * 109.47445 * 1 2 4 4 H 1.00900 * 109.47359 * 239.99403 * 1 2 3 5 5 C 1.46902 * 109.46505 * 119.99207 * 1 2 3 6 6 H 1.09004 * 109.47543 * 299.99902 * 5 1 2 7 7 C 1.53001 * 109.47112 * 60.00355 * 5 1 2 8 8 C 1.53000 * 109.46913 * 179.97438 * 7 5 1 9 9 C 1.53001 * 109.47292 * 299.99852 * 8 7 5 10 10 H 1.09004 * 109.46826 * 300.00256 * 9 8 7 11 11 N 1.46502 * 109.47025 * 180.02562 * 9 8 7 12 12 C 1.34780 * 119.99680 * 155.00068 * 11 9 8 13 13 O 1.21545 * 120.00177 * 359.97438 * 12 11 9 14 14 C 1.47888 * 119.99705 * 179.97438 * 12 11 9 15 15 C 1.39993 * 120.06262 * 179.97438 * 14 12 11 16 16 C 1.38369 * 118.02434 * 180.02562 * 15 14 12 17 17 C 1.39857 * 118.00972 * 0.02562 * 16 15 14 18 18 C 1.47962 * 120.08276 * 179.97438 * 17 16 15 19 19 C 1.34657 * 122.87770 * 359.70991 * 18 17 16 20 20 S 1.70627 * 110.50020 * 179.85815 * 19 18 17 21 21 C 1.75728 * 91.71331 * 0.33901 * 20 19 18 22 22 C 1.33091 * 109.79601 * 359.80887 * 21 20 19 23 23 C 1.50700 * 123.12268 * 179.97438 * 22 21 20 24 24 O 1.42905 * 109.47054 * 255.03593 * 23 22 21 25 25 Si 1.86299 * 109.47304 * 15.03618 * 23 22 21 26 26 N 1.33164 * 119.84021 * 0.02562 * 17 16 15 27 27 N 1.28354 * 122.10911 * 359.97438 * 26 17 16 28 28 C 1.53001 * 109.47020 * 60.00214 * 9 8 7 29 29 C 1.53000 * 109.46913 * 300.00018 * 28 9 8 30 30 H 1.09000 * 109.46983 * 60.00070 * 7 5 1 31 31 H 1.08992 * 109.47225 * 299.99681 * 7 5 1 32 32 H 1.09005 * 109.46871 * 179.97438 * 8 7 5 33 33 H 1.08999 * 109.47490 * 60.00220 * 8 7 5 34 34 H 0.96992 * 120.00171 * 334.99544 * 11 9 8 35 35 H 1.08001 * 120.98627 * 0.04872 * 15 14 12 36 36 H 1.08002 * 120.99124 * 179.97438 * 16 15 14 37 37 H 1.08003 * 124.74734 * 0.02562 * 19 18 17 38 38 H 1.08007 * 125.09788 * 179.78279 * 21 20 19 39 39 H 1.09003 * 109.47391 * 135.04063 * 23 22 21 40 40 H 0.96701 * 113.99899 * 60.00381 * 24 23 22 41 41 H 1.48510 * 109.99971 * 180.02562 * 25 23 22 42 42 H 1.48506 * 109.99805 * 301.31805 * 25 23 22 43 43 H 1.08999 * 109.46863 * 60.00183 * 28 9 8 44 44 H 1.09005 * 109.46978 * 180.02562 * 28 9 8 45 45 H 1.09000 * 109.46990 * 299.99621 * 29 28 9 46 46 H 1.09005 * 109.46871 * 180.02562 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9513 0.0000 4 1 -0.3364 -0.4757 0.8238 5 6 -0.4895 -0.6924 -1.1996 6 1 -0.1262 -0.1784 -2.0895 7 6 0.0205 -2.1349 -1.1997 8 6 -0.4899 -2.8561 -2.4488 9 6 -2.0199 -2.8561 -2.4483 10 1 -2.3829 -3.3700 -1.5582 11 7 -2.5086 -3.5473 -3.6441 12 6 -3.7306 -4.1159 -3.6416 13 8 -4.4270 -4.0556 -2.6473 14 6 -4.2241 -4.8131 -4.8489 15 6 -5.4929 -5.4046 -4.8476 16 6 -5.9121 -6.0464 -5.9996 17 6 -5.0422 -6.0653 -7.0945 18 6 -5.4436 -6.7393 -8.3491 19 6 -6.6303 -7.3578 -8.4993 20 16 -6.7644 -8.0212 -10.0656 21 6 -5.1634 -7.4444 -10.5042 22 6 -4.6219 -6.7935 -9.4773 23 6 -3.2493 -6.1732 -9.5271 24 8 -2.3345 -6.9804 -8.7829 25 14 -2.6815 -6.0629 -11.2980 26 7 -3.8514 -5.4762 -7.0050 27 7 -3.4633 -4.8811 -5.9360 28 6 -2.5299 -1.4136 -2.4482 29 6 -2.0195 -0.6924 -1.1991 30 1 -0.3430 -2.6488 -0.3098 31 1 1.1104 -2.1349 -1.1996 32 1 -0.1262 -3.8837 -2.4491 33 1 -0.1268 -2.3424 -3.3389 34 1 -1.9528 -3.5957 -4.4375 35 1 -6.1259 -5.3610 -3.9737 36 1 -6.8817 -6.5193 -6.0513 37 1 -7.3917 -7.4224 -7.7360 38 1 -4.6899 -7.5959 -11.4630 39 1 -3.2865 -5.1734 -9.0945 40 1 -2.2506 -7.8856 -9.1126 41 1 -1.3287 -5.4533 -11.3606 42 1 -2.6569 -7.4164 -11.9087 43 1 -2.1669 -0.8999 -3.3383 44 1 -3.6200 -1.4137 -2.4474 45 1 -2.3827 -1.2062 -0.3091 46 1 -2.3833 0.3352 -1.1988 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081482_17088014.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:29:55 Heat of formation + Delta-G solvation = 143.954030 kcal Electronic energy + Delta-G solvation = -29756.849079 eV Core-core repulsion = 25666.137938 eV Total energy + Delta-G solvation = -4090.711141 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.133 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -43.54824 -43.05017 -41.63531 -40.45961 -39.21419 -37.73785 -36.08413 -35.11568 -34.58737 -33.95471 -31.93554 -31.17333 -28.61439 -27.09490 -26.34608 -26.11230 -25.54879 -24.26821 -23.44551 -22.92917 -21.44632 -21.18949 -21.06238 -20.40971 -19.99136 -19.76787 -19.27081 -18.51902 -18.04287 -17.72967 -17.49560 -17.40347 -17.17616 -16.75352 -16.67099 -16.45793 -16.18746 -16.06714 -15.68806 -15.54529 -15.34888 -15.24643 -14.89161 -14.76450 -14.62756 -14.60931 -14.48680 -14.16407 -14.04705 -13.80582 -13.48834 -13.23151 -13.00702 -12.52847 -12.28041 -12.23403 -12.14839 -12.08103 -11.59976 -11.39591 -10.94022 -10.60067 -9.97288 -5.48058 -1.73723 -1.18625 -1.06245 -0.69891 -0.15237 0.19160 0.39222 0.68039 0.70057 0.76734 0.77711 0.86695 0.99581 1.05080 1.45268 1.50100 1.60488 1.68825 1.88176 1.89576 2.00388 2.08920 2.23391 2.34202 2.40666 2.43384 2.53674 2.65519 2.71825 2.78094 2.87765 2.91905 2.94379 3.02397 3.12642 3.19363 3.23994 3.32900 3.34635 3.54316 3.63644 3.65490 3.76384 3.81786 4.03055 4.13221 4.17210 4.23455 4.50470 4.62257 5.22835 5.94254 5.97649 6.71503 Molecular weight = 362.13amu Principal moments of inertia in cm(-1) A = 0.016795 B = 0.002264 C = 0.002054 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1666.723828 B =12363.048185 C =13629.508084 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.437 0.563 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.137 4.137 8 C -0.128 4.128 9 C 0.140 3.860 10 H 0.097 0.903 11 N -0.712 5.712 12 C 0.588 3.412 13 O -0.524 6.524 14 C 0.000 4.000 15 C -0.057 4.057 16 C -0.116 4.116 17 C 0.161 3.839 18 C -0.064 4.064 19 C -0.226 4.226 20 S 0.233 5.767 21 C -0.237 4.237 22 C -0.096 4.096 23 C -0.040 4.040 24 O -0.511 6.511 25 Si 0.674 3.326 26 N -0.208 5.208 27 N -0.202 5.202 28 C -0.132 4.132 29 C -0.138 4.138 30 H 0.092 0.908 31 H 0.096 0.904 32 H 0.095 0.905 33 H 0.085 0.915 34 H 0.417 0.583 35 H 0.164 0.836 36 H 0.159 0.841 37 H 0.173 0.827 38 H 0.176 0.824 39 H 0.129 0.871 40 H 0.367 0.633 41 H -0.254 1.254 42 H -0.259 1.259 43 H 0.080 0.920 44 H 0.092 0.908 45 H 0.092 0.908 46 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 12.992 20.808 23.426 33.920 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.265 0.735 3 H 0.266 0.734 4 H 0.262 0.738 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.175 4.175 8 C -0.167 4.167 9 C 0.035 3.965 10 H 0.115 0.885 11 N -0.364 5.364 12 C 0.372 3.628 13 O -0.398 6.398 14 C -0.146 4.146 15 C -0.086 4.086 16 C -0.146 4.146 17 C 0.019 3.981 18 C -0.080 4.080 19 C -0.365 4.365 20 S 0.502 5.498 21 C -0.373 4.373 22 C -0.108 4.108 23 C -0.153 4.153 24 O -0.316 6.316 25 Si 0.575 3.425 26 N -0.053 5.053 27 N -0.050 5.050 28 C -0.171 4.171 29 C -0.177 4.177 30 H 0.111 0.889 31 H 0.114 0.886 32 H 0.114 0.886 33 H 0.104 0.896 34 H 0.254 0.746 35 H 0.182 0.818 36 H 0.177 0.823 37 H 0.191 0.809 38 H 0.193 0.807 39 H 0.147 0.853 40 H 0.214 0.786 41 H -0.179 1.179 42 H -0.184 1.184 43 H 0.099 0.901 44 H 0.110 0.890 45 H 0.110 0.890 46 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 13.344 20.580 22.176 33.067 hybrid contribution 0.278 -0.525 1.961 2.049 sum 13.622 20.055 24.138 34.211 Atomic orbital electron populations 1.42649 1.21162 1.20696 1.18850 0.73453 0.73410 0.73760 1.23601 0.99686 0.97471 0.87270 0.83792 1.22016 1.02759 0.90831 1.01938 1.21775 0.94386 1.03167 0.97332 1.21053 0.93101 0.92421 0.89944 0.88469 1.45762 1.17747 1.55760 1.17103 1.17528 0.81491 0.77777 0.85971 1.90841 1.56346 1.59434 1.33205 1.22582 0.94630 1.01550 0.95883 1.22318 0.94971 0.91973 0.99301 1.22402 1.01584 0.98386 0.92194 1.21161 0.91210 0.92707 0.93038 1.17052 0.94407 1.03696 0.92844 1.25342 1.01605 1.05128 1.04471 1.83494 1.13021 1.50509 1.02770 1.25767 1.00388 1.06999 1.04104 1.19360 0.98610 1.00589 0.92239 1.24736 0.85075 0.97757 1.07731 1.86705 1.62770 1.26255 1.55891 0.95303 0.85505 0.84963 0.76758 1.73681 1.11847 1.05043 1.14712 1.73230 1.27109 1.09120 0.95516 1.21948 1.03579 0.94983 0.96608 1.22044 0.89265 1.04060 1.02312 0.88930 0.88581 0.88635 0.89628 0.74624 0.81812 0.82341 0.80928 0.80672 0.85332 0.78625 1.17861 1.18392 0.90101 0.88966 0.88988 0.88838 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 23.75 4.15 -4.66 -0.02 23.73 16 2 H 0.44 -17.03 8.96 -39.29 -0.35 -17.38 16 3 H 0.44 -16.97 8.96 -39.29 -0.35 -17.32 16 4 H 0.43 -16.59 8.90 -39.29 -0.35 -16.94 16 5 C 0.02 -0.73 3.03 -67.71 -0.20 -0.94 16 6 H 0.14 -4.53 8.14 -51.93 -0.42 -4.95 16 7 C -0.14 3.77 5.43 -26.73 -0.15 3.63 16 8 C -0.13 2.83 5.39 -26.73 -0.14 2.68 16 9 C 0.14 -2.60 2.45 -67.93 -0.17 -2.77 16 10 H 0.10 -1.67 7.58 -51.93 -0.39 -2.06 16 11 N -0.71 10.09 5.07 -54.73 -0.28 9.81 16 12 C 0.59 -5.93 7.77 -12.31 -0.10 -6.02 16 13 O -0.52 4.11 16.04 5.33 0.09 4.20 16 14 C 0.00 0.00 6.83 -82.81 -0.57 -0.56 16 15 C -0.06 0.51 9.71 -38.88 -0.38 0.14 16 16 C -0.12 1.05 9.59 -38.93 -0.37 0.68 16 17 C 0.16 -1.12 6.82 -82.70 -0.56 -1.68 16 18 C -0.06 0.46 5.79 -106.64 -0.62 -0.16 16 19 C -0.23 2.00 10.25 29.46 0.30 2.31 16 20 S 0.23 -2.07 23.09 -107.50 -2.48 -4.55 16 21 C -0.24 1.94 9.67 28.94 0.28 2.22 16 22 C -0.10 0.69 5.20 -105.87 -0.55 0.14 16 23 C -0.04 0.27 1.82 36.01 0.07 0.34 16 24 O -0.51 2.87 12.12 -35.23 -0.43 2.44 16 25 Si 0.67 -5.05 30.53 -169.99 -5.19 -10.24 16 26 N -0.21 1.21 7.78 33.37 0.26 1.47 16 27 N -0.20 1.44 10.73 33.33 0.36 1.80 16 28 C -0.13 2.72 5.50 -26.73 -0.15 2.57 16 29 C -0.14 3.69 5.43 -26.73 -0.15 3.55 16 30 H 0.09 -2.54 8.14 -51.93 -0.42 -2.97 16 31 H 0.10 -2.73 8.14 -51.93 -0.42 -3.15 16 32 H 0.10 -1.90 8.14 -51.93 -0.42 -2.32 16 33 H 0.09 -1.90 8.14 -51.93 -0.42 -2.32 16 34 H 0.42 -6.02 7.95 -40.82 -0.32 -6.34 16 35 H 0.16 -1.71 7.71 -52.49 -0.40 -2.11 16 36 H 0.16 -1.88 6.68 -52.49 -0.35 -2.23 16 37 H 0.17 -1.95 6.81 -52.48 -0.36 -2.31 16 38 H 0.18 -1.63 5.75 -52.48 -0.30 -1.93 16 39 H 0.13 -0.82 6.43 -51.93 -0.33 -1.16 16 40 H 0.37 -2.99 8.70 45.56 0.40 -2.59 16 41 H -0.25 1.05 7.11 56.52 0.40 1.45 16 42 H -0.26 1.50 6.86 56.52 0.39 1.89 16 43 H 0.08 -1.66 8.14 -51.93 -0.42 -2.09 16 44 H 0.09 -1.55 8.14 -51.93 -0.42 -1.97 16 45 H 0.09 -2.44 8.14 -51.93 -0.42 -2.86 16 46 H 0.09 -2.56 8.14 -51.93 -0.42 -2.98 16 LS Contribution 381.86 15.07 5.75 5.75 Total: 1.00 -42.56 381.86 -11.53 -54.09 By element: Atomic # 1 Polarization: -88.50 SS G_CDS: -6.14 Total: -94.63 kcal Atomic # 6 Polarization: 9.57 SS G_CDS: -3.45 Total: 6.12 kcal Atomic # 7 Polarization: 36.50 SS G_CDS: 0.32 Total: 36.82 kcal Atomic # 8 Polarization: 6.98 SS G_CDS: -0.34 Total: 6.64 kcal Atomic # 14 Polarization: -5.05 SS G_CDS: -5.19 Total: -10.24 kcal Atomic # 16 Polarization: -2.07 SS G_CDS: -2.48 Total: -4.55 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -42.56 -11.53 -54.09 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081482_17088014.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 198.044 kcal (2) G-P(sol) polarization free energy of solvation -42.561 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 155.483 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.529 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -54.090 kcal (6) G-S(sol) free energy of system = (1) + (5) 143.954 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds