Wall clock time and date at job start Mon Mar 8 2021 08:43:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00896 * 1 3 3 H 1.00892 * 109.47531 * 1 2 4 4 H 1.00899 * 109.47296 * 239.99482 * 1 2 3 5 5 C 1.46907 * 109.46847 * 120.00129 * 1 2 3 6 6 H 1.08998 * 109.47036 * 300.00042 * 5 1 2 7 7 C 1.53000 * 109.47215 * 59.99798 * 5 1 2 8 8 C 1.52997 * 109.46969 * 179.97438 * 7 5 1 9 9 C 1.53001 * 109.47559 * 299.99964 * 8 7 5 10 10 H 1.09002 * 109.46940 * 300.00171 * 9 8 7 11 11 N 1.46496 * 109.47197 * 180.02562 * 9 8 7 12 12 C 1.34771 * 120.00368 * 155.00468 * 11 9 8 13 13 O 1.21587 * 119.99548 * 359.97438 * 12 11 9 14 14 C 1.47580 * 120.00607 * 179.97438 * 12 11 9 15 15 C 1.40145 * 120.85135 * 179.97438 * 14 12 11 16 16 N 1.31896 * 119.03810 * 179.97438 * 15 14 12 17 17 C 1.32884 * 120.87687 * 359.97438 * 16 15 14 18 18 C 1.47810 * 119.06791 * 179.97438 * 17 16 15 19 19 C 1.34755 * 122.89587 * 0.21036 * 18 17 16 20 20 S 1.70622 * 110.48716 * 180.21734 * 19 18 17 21 21 C 1.75719 * 91.72936 * 359.76672 * 20 19 18 22 22 C 1.33044 * 109.82416 * 359.97438 * 21 20 19 23 23 C 1.50695 * 123.12362 * 179.97438 * 22 21 20 24 24 O 1.42898 * 109.46955 * 105.02924 * 23 22 21 25 25 Si 1.86300 * 109.47389 * 345.02833 * 23 22 21 26 26 N 1.32883 * 121.87005 * 0.25537 * 17 16 15 27 27 C 1.31904 * 120.87795 * 359.48236 * 26 17 16 28 28 C 1.53000 * 109.46950 * 60.00025 * 9 8 7 29 29 C 1.52997 * 109.46969 * 300.00336 * 28 9 8 30 30 H 1.09002 * 109.47179 * 59.99741 * 7 5 1 31 31 H 1.09000 * 109.47037 * 300.00169 * 7 5 1 32 32 H 1.09004 * 109.46977 * 180.02562 * 8 7 5 33 33 H 1.08998 * 109.46911 * 60.00470 * 8 7 5 34 34 H 0.97004 * 119.99553 * 334.99960 * 11 9 8 35 35 H 1.08001 * 120.47981 * 359.97438 * 15 14 12 36 36 H 1.08002 * 124.75220 * 359.97438 * 19 18 17 37 37 H 1.08003 * 125.09294 * 179.97438 * 21 20 19 38 38 H 1.09001 * 109.47545 * 225.02467 * 23 22 21 39 39 H 0.96700 * 113.99995 * 299.99800 * 24 23 22 40 40 H 1.48501 * 109.99832 * 58.67561 * 25 23 22 41 41 H 1.48498 * 109.99998 * 179.97438 * 25 23 22 42 42 H 1.07991 * 120.48576 * 180.25625 * 27 26 17 43 43 H 1.08998 * 109.46920 * 59.99861 * 28 9 8 44 44 H 1.08995 * 109.47478 * 179.97438 * 28 9 8 45 45 H 1.08998 * 109.46911 * 299.99530 * 29 28 9 46 46 H 1.09004 * 109.46977 * 179.97438 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9512 0.0000 4 1 -0.3364 -0.4757 0.8238 5 6 -0.4896 -0.6926 -1.1995 6 1 -0.1263 -0.1787 -2.0894 7 6 0.0204 -2.1350 -1.1995 8 6 -0.4900 -2.8564 -2.4484 9 6 -2.0200 -2.8566 -2.4479 10 1 -2.3830 -3.3703 -1.5577 11 7 -2.5087 -3.5479 -3.6434 12 6 -3.7307 -4.1164 -3.6410 13 8 -4.4272 -4.0560 -2.6463 14 6 -4.2232 -4.8124 -4.8456 15 6 -5.4907 -5.4102 -4.8624 16 7 -5.8953 -6.0225 -5.9583 17 6 -5.1191 -6.0760 -7.0356 18 6 -5.6124 -6.7730 -8.2421 19 6 -6.8243 -7.3590 -8.3048 20 16 -7.0644 -8.0720 -9.8362 21 6 -5.4809 -7.5469 -10.3880 22 6 -4.8642 -6.8771 -9.4179 23 6 -3.4843 -6.2911 -9.5703 24 8 -3.5831 -4.8743 -9.7276 25 14 -2.6595 -7.0264 -11.0703 26 7 -3.9099 -5.5254 -7.0573 27 6 -3.4361 -4.8909 -6.0025 28 6 -2.5301 -1.4141 -2.4479 29 6 -2.0196 -0.6927 -1.1990 30 1 -0.3429 -2.6489 -0.3095 31 1 1.1104 -2.1350 -1.1994 32 1 -0.1270 -3.8843 -2.4482 33 1 -0.1270 -2.3427 -3.3386 34 1 -1.9528 -3.5963 -4.4369 35 1 -6.1269 -5.3702 -3.9905 36 1 -7.5412 -7.3783 -7.4973 37 1 -5.0697 -7.7391 -11.3680 38 1 -2.8932 -6.5178 -8.6830 39 1 -4.0968 -4.5991 -10.4993 40 1 -3.4721 -6.7516 -12.2826 41 1 -1.2980 -6.4561 -11.2321 42 1 -2.4541 -4.4422 -6.0284 43 1 -2.1671 -0.9004 -3.3380 44 1 -3.6201 -1.4141 -2.4480 45 1 -2.3827 -1.2064 -0.3088 46 1 -2.3826 0.3351 -1.1992 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081482_17119452.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:43:50 Heat of formation + Delta-G solvation = 138.867028 kcal Electronic energy + Delta-G solvation = -29758.094613 eV Core-core repulsion = 25667.162883 eV Total energy + Delta-G solvation = -4090.931730 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.133 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -43.61341 -43.09826 -41.66844 -40.32987 -39.23699 -37.66256 -36.31343 -35.54012 -34.31358 -34.01817 -32.02701 -31.07324 -28.60195 -26.97255 -26.42353 -26.18010 -25.44388 -24.26687 -23.52726 -22.90410 -21.45588 -21.22790 -21.04594 -20.19662 -20.09918 -19.81550 -19.54267 -18.49130 -18.06038 -17.75774 -17.70713 -17.30751 -17.16689 -16.83672 -16.74884 -16.53474 -16.20953 -16.09315 -15.63665 -15.46393 -15.39646 -15.30241 -15.03212 -14.83219 -14.57746 -14.54234 -14.42493 -14.23572 -14.03207 -13.75735 -13.55415 -13.29679 -13.05636 -12.77946 -12.51212 -12.22323 -12.00889 -11.85418 -11.48486 -11.24833 -10.79175 -10.51549 -9.95412 -5.48173 -1.74893 -1.23215 -0.76191 -0.62576 -0.08456 0.26402 0.49348 0.62806 0.64786 0.71889 0.77435 0.82074 1.02054 1.04602 1.43277 1.45136 1.55573 1.63795 1.90294 1.95835 2.01370 2.08548 2.17371 2.18842 2.31793 2.36872 2.42774 2.52676 2.63948 2.72425 2.81268 2.87231 2.94386 2.97722 3.10985 3.24450 3.26089 3.33506 3.43148 3.49754 3.59317 3.70924 3.82275 4.01531 4.04639 4.21161 4.36063 4.54154 4.66541 5.01915 5.13509 5.93230 5.95093 6.16369 Molecular weight = 362.13amu Principal moments of inertia in cm(-1) A = 0.017300 B = 0.002233 C = 0.002034 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1618.134883 B =12535.556092 C =13763.116783 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.437 0.563 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.138 4.138 8 C -0.128 4.128 9 C 0.142 3.858 10 H 0.098 0.902 11 N -0.727 5.727 12 C 0.581 3.419 13 O -0.525 6.525 14 C -0.271 4.271 15 C 0.222 3.778 16 N -0.516 5.516 17 C 0.416 3.584 18 C -0.069 4.069 19 C -0.190 4.190 20 S 0.230 5.770 21 C -0.243 4.243 22 C -0.091 4.091 23 C -0.035 4.035 24 O -0.515 6.515 25 Si 0.671 3.329 26 N -0.490 5.490 27 C 0.194 3.806 28 C -0.132 4.132 29 C -0.139 4.139 30 H 0.093 0.907 31 H 0.096 0.904 32 H 0.095 0.905 33 H 0.084 0.916 34 H 0.403 0.597 35 H 0.183 0.817 36 H 0.181 0.819 37 H 0.176 0.824 38 H 0.129 0.871 39 H 0.368 0.632 40 H -0.259 1.259 41 H -0.255 1.255 42 H 0.168 0.832 43 H 0.079 0.921 44 H 0.092 0.908 45 H 0.092 0.908 46 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 18.651 19.659 24.545 36.562 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.266 0.734 4 H 0.263 0.737 5 C -0.080 4.080 6 H 0.161 0.839 7 C -0.176 4.176 8 C -0.166 4.166 9 C 0.037 3.963 10 H 0.116 0.884 11 N -0.380 5.380 12 C 0.368 3.632 13 O -0.401 6.401 14 C -0.279 4.279 15 C 0.053 3.947 16 N -0.229 5.229 17 C 0.153 3.847 18 C -0.085 4.085 19 C -0.331 4.331 20 S 0.499 5.501 21 C -0.378 4.378 22 C -0.103 4.103 23 C -0.148 4.148 24 O -0.320 6.320 25 Si 0.572 3.428 26 N -0.203 5.203 27 C 0.024 3.976 28 C -0.171 4.171 29 C -0.177 4.177 30 H 0.111 0.889 31 H 0.114 0.886 32 H 0.113 0.887 33 H 0.102 0.898 34 H 0.239 0.761 35 H 0.200 0.800 36 H 0.198 0.802 37 H 0.193 0.807 38 H 0.147 0.853 39 H 0.214 0.786 40 H -0.184 1.184 41 H -0.180 1.180 42 H 0.185 0.815 43 H 0.098 0.902 44 H 0.111 0.889 45 H 0.111 0.889 46 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 17.222 18.384 23.271 34.295 hybrid contribution 1.188 2.504 1.187 3.015 sum 18.410 20.889 24.459 37.061 Atomic orbital electron populations 1.42645 1.21164 1.20723 1.18847 0.73448 0.73383 0.73724 1.23592 0.99696 0.97431 0.87288 0.83855 1.22014 1.02755 0.90866 1.01952 1.21778 0.94471 1.03065 0.97332 1.21016 0.92916 0.92386 0.90005 0.88384 1.45811 1.18067 1.57306 1.16777 1.17754 0.81026 0.77542 0.86896 1.90841 1.55992 1.59313 1.33993 1.21591 1.00120 1.08975 0.97246 1.23481 0.91245 0.84621 0.95312 1.68572 1.35606 1.18672 1.00074 1.21105 0.85279 0.87832 0.90521 1.16821 0.94805 1.04839 0.92029 1.25536 1.00866 1.02479 1.04192 1.83506 1.13750 1.50090 1.02789 1.25692 1.00052 1.07622 1.04476 1.19287 0.98745 1.00123 0.92154 1.24713 0.94776 0.84090 1.11243 1.86642 1.75672 1.19676 1.49980 0.95249 0.79970 0.91025 0.76530 1.68720 1.13925 1.09955 1.27690 1.23407 0.98207 0.89452 0.86494 1.21942 1.03660 0.94989 0.96527 1.22047 0.89239 1.04095 1.02356 0.88878 0.88584 0.88664 0.89783 0.76064 0.80011 0.80196 0.80698 0.85303 0.78575 1.18370 1.18003 0.81480 0.90250 0.88924 0.88943 0.88847 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.07 4.15 -4.66 -0.02 24.05 16 2 H 0.44 -17.25 8.96 -39.29 -0.35 -17.60 16 3 H 0.44 -17.15 8.96 -39.30 -0.35 -17.50 16 4 H 0.43 -16.79 8.90 -39.29 -0.35 -17.14 16 5 C 0.02 -0.76 3.03 -67.71 -0.20 -0.96 16 6 H 0.14 -4.61 8.14 -51.93 -0.42 -5.03 16 7 C -0.14 3.91 5.43 -26.73 -0.15 3.77 16 8 C -0.13 3.01 5.39 -26.73 -0.14 2.87 16 9 C 0.14 -2.83 2.45 -67.93 -0.17 -3.00 16 10 H 0.10 -1.78 7.58 -51.93 -0.39 -2.17 16 11 N -0.73 12.05 5.03 -54.84 -0.28 11.78 16 12 C 0.58 -6.82 7.74 -12.45 -0.10 -6.91 16 13 O -0.53 4.45 16.09 5.29 0.09 4.53 16 14 C -0.27 2.74 5.91 -104.65 -0.62 2.12 16 15 C 0.22 -1.75 10.87 -16.81 -0.18 -1.93 16 16 N -0.52 3.01 9.78 -10.86 -0.11 2.90 16 17 C 0.42 -2.35 7.57 -156.67 -1.19 -3.54 16 18 C -0.07 0.40 5.80 -106.65 -0.62 -0.22 16 19 C -0.19 1.27 10.43 29.50 0.31 1.57 16 20 S 0.23 -1.80 23.09 -107.50 -2.48 -4.28 16 21 C -0.24 1.85 9.67 28.93 0.28 2.13 16 22 C -0.09 0.61 5.20 -105.86 -0.55 0.06 16 23 C -0.04 0.25 1.81 36.00 0.07 0.32 16 24 O -0.51 3.32 12.11 -35.23 -0.43 2.89 16 25 Si 0.67 -5.17 30.53 -169.99 -5.19 -10.36 16 26 N -0.49 3.50 6.52 -10.86 -0.07 3.43 16 27 C 0.19 -2.03 10.80 -16.80 -0.18 -2.21 16 28 C -0.13 2.83 5.50 -26.73 -0.15 2.69 16 29 C -0.14 3.79 5.43 -26.73 -0.15 3.64 16 30 H 0.09 -2.63 8.14 -51.93 -0.42 -3.05 16 31 H 0.10 -2.81 8.14 -51.93 -0.42 -3.23 16 32 H 0.09 -2.06 8.14 -51.93 -0.42 -2.48 16 33 H 0.08 -2.01 8.14 -51.93 -0.42 -2.43 16 34 H 0.40 -7.44 6.72 -40.82 -0.27 -7.72 16 35 H 0.18 -1.65 7.73 -52.49 -0.41 -2.06 16 36 H 0.18 -1.31 7.89 -52.49 -0.41 -1.73 16 37 H 0.18 -1.57 5.75 -52.48 -0.30 -1.87 16 38 H 0.13 -0.93 6.36 -51.93 -0.33 -1.26 16 39 H 0.37 -3.16 8.70 45.56 0.40 -2.76 16 40 H -0.26 1.51 6.86 56.52 0.39 1.90 16 41 H -0.26 1.16 7.11 56.52 0.40 1.56 16 42 H 0.17 -2.47 6.52 -52.49 -0.34 -2.82 16 43 H 0.08 -1.71 8.14 -51.93 -0.42 -2.14 16 44 H 0.09 -1.61 8.14 -51.93 -0.42 -2.03 16 45 H 0.09 -2.49 8.14 -51.93 -0.42 -2.92 16 46 H 0.09 -2.59 8.14 -51.93 -0.42 -3.01 16 LS Contribution 381.67 15.07 5.75 5.75 Total: 1.00 -43.79 381.67 -12.60 -56.39 By element: Atomic # 1 Polarization: -91.35 SS G_CDS: -6.14 Total: -97.48 kcal Atomic # 6 Polarization: 4.13 SS G_CDS: -3.73 Total: 0.39 kcal Atomic # 7 Polarization: 42.64 SS G_CDS: -0.47 Total: 42.16 kcal Atomic # 8 Polarization: 7.77 SS G_CDS: -0.34 Total: 7.43 kcal Atomic # 14 Polarization: -5.17 SS G_CDS: -5.19 Total: -10.36 kcal Atomic # 16 Polarization: -1.80 SS G_CDS: -2.48 Total: -4.28 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -43.79 -12.60 -56.39 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081482_17119452.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 195.259 kcal (2) G-P(sol) polarization free energy of solvation -43.788 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 151.472 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.605 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -56.392 kcal (6) G-S(sol) free energy of system = (1) + (5) 138.867 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds