Wall clock time and date at job start Mon Mar 8 2021 08:47:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00898 * 1 3 3 H 1.00903 * 109.47051 * 1 2 4 4 H 1.00901 * 109.46776 * 240.00920 * 1 2 3 5 5 C 1.46898 * 109.47575 * 120.00687 * 1 2 3 6 6 H 1.09001 * 109.47062 * 179.97438 * 5 1 2 7 7 C 1.53006 * 109.47006 * 299.99671 * 5 1 2 8 8 C 1.52997 * 109.47127 * 179.97438 * 7 5 1 9 9 C 1.53000 * 109.47060 * 300.00449 * 8 7 5 10 10 H 1.09001 * 109.47194 * 299.99650 * 9 8 7 11 11 N 1.46499 * 109.46840 * 180.02562 * 9 8 7 12 12 C 1.34782 * 120.00074 * 155.00031 * 11 9 8 13 13 O 1.21585 * 119.99861 * 359.97438 * 12 11 9 14 14 C 1.47583 * 119.99949 * 180.02562 * 12 11 9 15 15 C 1.40270 * 120.44735 * 180.02562 * 14 12 11 16 16 C 1.36931 * 118.51659 * 179.97438 * 15 14 12 17 17 C 1.39620 * 119.34917 * 359.97438 * 16 15 14 18 18 C 1.47959 * 119.57648 * 180.02562 * 17 16 15 19 19 C 1.34649 * 122.87776 * 359.70347 * 18 17 16 20 20 S 1.70633 * 110.50224 * 179.91696 * 19 18 17 21 21 C 1.75726 * 91.71189 * 0.29613 * 20 19 18 22 22 C 1.33090 * 109.79771 * 359.83227 * 21 20 19 23 23 C 1.50701 * 123.12638 * 179.97438 * 22 21 20 24 24 O 1.42897 * 109.47356 * 255.02335 * 23 22 21 25 25 Si 1.86299 * 109.46924 * 15.02502 * 23 22 21 26 26 N 1.32923 * 120.85297 * 359.97438 * 17 16 15 27 27 C 1.31533 * 121.61357 * 359.76421 * 26 17 16 28 28 C 1.52996 * 109.47328 * 60.00126 * 9 8 7 29 29 C 1.52997 * 109.47123 * 59.99652 * 5 1 2 30 30 H 1.08998 * 109.46505 * 59.99663 * 7 5 1 31 31 H 1.08996 * 109.46884 * 300.00544 * 7 5 1 32 32 H 1.09002 * 109.47153 * 180.02562 * 8 7 5 33 33 H 1.09001 * 109.46832 * 60.00321 * 8 7 5 34 34 H 0.97002 * 120.00427 * 334.99530 * 11 9 8 35 35 H 1.07997 * 120.74052 * 359.94729 * 15 14 12 36 36 H 1.08001 * 120.32744 * 179.97438 * 16 15 14 37 37 H 1.08004 * 124.74934 * 0.04228 * 19 18 17 38 38 H 1.07999 * 125.09716 * 179.79138 * 21 20 19 39 39 H 1.09009 * 109.46905 * 135.02163 * 23 22 21 40 40 H 0.96701 * 113.99760 * 60.00048 * 24 23 22 41 41 H 1.48505 * 109.99784 * 179.97438 * 25 23 22 42 42 H 1.48491 * 110.00117 * 301.31561 * 25 23 22 43 43 H 1.08000 * 119.71943 * 180.24235 * 27 26 17 44 44 H 1.08992 * 109.47554 * 59.99639 * 28 9 8 45 45 H 1.09004 * 109.47108 * 179.97438 * 28 9 8 46 46 H 1.09002 * 109.47045 * 60.00157 * 29 5 1 47 47 H 1.09001 * 109.47375 * 300.00082 * 29 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3363 0.9513 0.0000 4 1 -0.3363 -0.4755 0.8239 5 6 -0.4898 -0.6926 -1.1993 6 1 -1.5798 -0.6930 -1.1990 7 6 0.0201 0.0286 -2.4487 8 6 -0.4894 -0.6931 -3.6978 9 6 0.0210 -2.1355 -3.6973 10 1 1.1110 -2.1352 -3.6972 11 7 -0.4664 -2.8263 -4.8937 12 6 0.2110 -3.8830 -5.3848 13 8 1.2269 -4.2626 -4.8351 14 6 -0.2798 -4.5786 -6.5903 15 6 0.4175 -5.6796 -7.1091 16 6 -0.0735 -6.2957 -8.2291 17 6 -1.2448 -5.8143 -8.8171 18 6 -1.7801 -6.4766 -10.0270 19 6 -1.1828 -7.5358 -10.6054 20 16 -2.0657 -8.0465 -11.9733 21 6 -3.2597 -6.7781 -11.7417 22 6 -2.9451 -6.0530 -10.6709 23 6 -3.7689 -4.8833 -10.1974 24 8 -3.1025 -3.6645 -10.5325 25 14 -5.4387 -4.9253 -11.0225 26 7 -1.8857 -4.7693 -8.3033 27 6 -1.4488 -4.1539 -7.2261 28 6 -0.4889 -2.8566 -2.4481 29 6 0.0202 -2.1351 -1.1992 30 1 1.1101 0.0286 -2.4487 31 1 -0.3431 1.0562 -2.4487 32 1 -0.1258 -0.1796 -4.5879 33 1 -1.5794 -0.6935 -3.6979 34 1 -1.2767 -2.5233 -5.3325 35 1 1.3217 -6.0332 -6.6360 36 1 0.4402 -7.1457 -8.6534 37 1 -0.2733 -7.9986 -10.2517 38 1 -4.1193 -6.6116 -12.3739 39 1 -3.8962 -4.9425 -9.1163 40 1 -2.9553 -3.5446 -11.4807 41 1 -6.2611 -3.7771 -10.5633 42 1 -5.2776 -4.8774 -12.4978 43 1 -1.9960 -3.3101 -6.8325 44 1 -1.5789 -2.8569 -2.4481 45 1 -0.1256 -3.8843 -2.4480 46 1 -0.3430 -2.6488 -0.3091 47 1 1.1102 -2.1351 -1.1993 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081482_17119696.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:47:22 Heat of formation + Delta-G solvation = 122.326455 kcal Electronic energy + Delta-G solvation = -29615.307201 eV Core-core repulsion = 25589.084128 eV Total energy + Delta-G solvation = -4026.223072 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.137 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -43.55710 -42.60952 -41.48399 -40.07473 -39.14444 -37.62327 -36.08205 -34.44209 -33.98661 -33.91219 -31.81000 -30.79840 -28.29357 -26.70590 -26.13555 -25.61612 -25.11591 -24.08383 -23.43981 -22.62639 -21.41155 -21.20340 -20.81077 -20.16686 -19.94420 -19.69406 -18.97940 -18.32928 -17.86941 -17.58791 -17.33174 -17.20895 -16.94927 -16.80090 -16.65920 -16.38435 -16.13971 -15.77523 -15.57149 -15.49914 -15.24909 -15.20942 -14.89950 -14.79036 -14.49786 -14.42212 -14.39259 -14.23169 -14.16381 -13.97405 -13.51173 -13.25637 -13.13785 -12.49566 -12.27966 -12.15613 -11.80255 -11.48419 -11.35687 -11.32753 -10.76104 -10.48073 -9.76469 -5.46842 -1.54477 -1.20928 -0.59845 -0.51610 -0.05245 0.29415 0.57615 0.67499 0.68881 0.76756 0.80404 0.86465 1.06119 1.14797 1.45406 1.48038 1.58170 1.66867 1.96018 2.05064 2.14581 2.22029 2.28538 2.36380 2.41031 2.53240 2.68930 2.76627 2.81423 2.84860 2.92154 2.94316 2.98750 3.13410 3.15010 3.28412 3.29286 3.42914 3.50811 3.54719 3.63848 3.67428 3.81194 3.95254 4.10919 4.17012 4.24350 4.30144 4.56678 4.64708 4.79790 5.23379 5.99751 6.02337 6.10172 Molecular weight = 361.14amu Principal moments of inertia in cm(-1) A = 0.016926 B = 0.002236 C = 0.002032 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1653.818981 B =12519.748078 C =13773.417986 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.434 0.566 3 H 0.437 0.563 4 H 0.437 0.563 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.137 4.137 8 C -0.128 4.128 9 C 0.141 3.859 10 H 0.097 0.903 11 N -0.728 5.728 12 C 0.574 3.426 13 O -0.530 6.530 14 C -0.210 4.210 15 C -0.008 4.008 16 C -0.171 4.171 17 C 0.228 3.772 18 C -0.065 4.065 19 C -0.228 4.228 20 S 0.221 5.779 21 C -0.240 4.240 22 C -0.095 4.095 23 C -0.033 4.033 24 O -0.513 6.513 25 Si 0.668 3.332 26 N -0.457 5.457 27 C 0.147 3.853 28 C -0.131 4.131 29 C -0.139 4.139 30 H 0.092 0.908 31 H 0.095 0.905 32 H 0.094 0.906 33 H 0.084 0.916 34 H 0.404 0.596 35 H 0.149 0.851 36 H 0.144 0.856 37 H 0.172 0.828 38 H 0.174 0.826 39 H 0.130 0.870 40 H 0.367 0.633 41 H -0.256 1.256 42 H -0.260 1.260 43 H 0.156 0.844 44 H 0.079 0.921 45 H 0.092 0.908 46 H 0.093 0.907 47 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.745 17.540 30.695 35.551 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.263 0.737 3 H 0.265 0.735 4 H 0.266 0.734 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.176 4.176 8 C -0.167 4.167 9 C 0.036 3.964 10 H 0.115 0.885 11 N -0.381 5.381 12 C 0.362 3.638 13 O -0.407 6.407 14 C -0.216 4.216 15 C -0.034 4.034 16 C -0.192 4.192 17 C 0.090 3.910 18 C -0.080 4.080 19 C -0.367 4.367 20 S 0.490 5.510 21 C -0.375 4.375 22 C -0.107 4.107 23 C -0.146 4.146 24 O -0.318 6.318 25 Si 0.569 3.431 26 N -0.165 5.165 27 C -0.014 4.014 28 C -0.171 4.171 29 C -0.177 4.177 30 H 0.111 0.889 31 H 0.114 0.886 32 H 0.113 0.887 33 H 0.102 0.898 34 H 0.240 0.760 35 H 0.166 0.834 36 H 0.162 0.838 37 H 0.190 0.810 38 H 0.191 0.809 39 H 0.147 0.853 40 H 0.213 0.787 41 H -0.180 1.180 42 H -0.185 1.185 43 H 0.173 0.827 44 H 0.098 0.902 45 H 0.110 0.890 46 H 0.111 0.889 47 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 3.217 16.719 29.459 34.026 hybrid contribution 1.234 1.746 0.930 2.332 sum 4.451 18.466 30.390 35.838 Atomic orbital electron populations 1.42648 1.21348 1.20672 1.18703 0.73741 0.73457 0.73397 1.23591 1.04467 0.95870 0.84061 0.83843 1.22015 1.03340 1.00172 0.92054 1.21779 1.02495 0.94577 0.97801 1.20995 1.00756 0.90233 0.84375 0.88539 1.45849 1.29850 1.32655 1.29720 1.18049 0.83021 0.79443 0.83286 1.90820 1.24304 1.65124 1.60414 1.20830 1.00101 1.01169 0.99456 1.21352 0.97964 0.91166 0.92882 1.21827 0.97451 1.02532 0.97343 1.19619 0.89906 0.89713 0.91736 1.17277 0.96800 0.97319 0.96614 1.25326 1.06320 1.02203 1.02834 1.83455 1.15051 1.29179 1.23318 1.25740 1.06019 1.02163 1.03589 1.19352 0.96588 0.99328 0.95432 1.24670 1.01612 0.81614 1.06700 1.86660 1.78867 1.37953 1.28290 0.95358 0.78476 0.89214 0.80044 1.67988 1.31694 1.06923 1.09906 1.22906 0.91528 0.96796 0.90150 1.21932 1.02108 1.01302 0.91729 1.22039 1.03300 0.90560 1.01833 0.88924 0.88616 0.88705 0.89784 0.75984 0.83355 0.83849 0.81035 0.80911 0.85286 0.78694 1.18042 1.18490 0.82694 0.90246 0.88954 0.88862 0.89003 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 23.89 4.15 -4.67 -0.02 23.88 16 2 H 0.43 -16.66 8.90 -39.29 -0.35 -17.01 16 3 H 0.44 -17.13 8.96 -39.29 -0.35 -17.48 16 4 H 0.44 -17.05 8.96 -39.29 -0.35 -17.41 16 5 C 0.02 -0.75 3.03 -67.71 -0.20 -0.96 16 6 H 0.14 -4.57 8.14 -51.93 -0.42 -5.00 16 7 C -0.14 3.84 5.43 -26.73 -0.15 3.69 16 8 C -0.13 2.93 5.39 -26.73 -0.14 2.79 16 9 C 0.14 -2.73 2.45 -67.93 -0.17 -2.90 16 10 H 0.10 -1.67 7.58 -51.93 -0.39 -2.06 16 11 N -0.73 11.44 5.03 -54.83 -0.28 11.17 16 12 C 0.57 -6.24 7.74 -12.45 -0.10 -6.33 16 13 O -0.53 3.98 16.07 5.29 0.09 4.07 16 14 C -0.21 2.02 5.89 -104.78 -0.62 1.40 16 15 C -0.01 0.07 9.65 -39.29 -0.38 -0.31 16 16 C -0.17 1.42 9.45 -39.54 -0.37 1.05 16 17 C 0.23 -1.56 6.74 -82.90 -0.56 -2.12 16 18 C -0.07 0.44 5.79 -106.64 -0.62 -0.18 16 19 C -0.23 1.82 10.22 29.46 0.30 2.12 16 20 S 0.22 -1.79 23.09 -107.50 -2.48 -4.27 16 21 C -0.24 1.81 9.67 28.94 0.28 2.09 16 22 C -0.10 0.65 5.20 -105.87 -0.55 0.10 16 23 C -0.03 0.23 1.82 36.01 0.07 0.30 16 24 O -0.51 3.09 12.10 -35.23 -0.43 2.66 16 25 Si 0.67 -4.96 30.53 -169.99 -5.19 -10.15 16 26 N -0.46 3.28 6.53 -9.46 -0.06 3.22 16 27 C 0.15 -1.45 10.71 -17.14 -0.18 -1.64 16 28 C -0.13 2.77 5.49 -26.76 -0.15 2.62 16 29 C -0.14 3.74 5.43 -26.76 -0.15 3.59 16 30 H 0.09 -2.57 8.14 -51.93 -0.42 -2.99 16 31 H 0.10 -2.76 8.14 -51.93 -0.42 -3.18 16 32 H 0.09 -1.97 8.14 -51.93 -0.42 -2.39 16 33 H 0.08 -1.95 8.14 -51.93 -0.42 -2.38 16 34 H 0.40 -7.05 6.65 -40.82 -0.27 -7.33 16 35 H 0.15 -1.35 7.72 -52.49 -0.41 -1.76 16 36 H 0.14 -1.46 6.56 -52.49 -0.34 -1.81 16 37 H 0.17 -1.73 6.74 -52.48 -0.35 -2.08 16 38 H 0.17 -1.50 5.75 -52.49 -0.30 -1.80 16 39 H 0.13 -0.90 6.41 -51.92 -0.33 -1.23 16 40 H 0.37 -2.99 8.70 45.56 0.40 -2.59 16 41 H -0.26 1.08 7.11 56.52 0.40 1.48 16 42 H -0.26 1.42 6.86 56.52 0.39 1.81 16 43 H 0.16 -2.11 6.41 -52.49 -0.34 -2.44 16 44 H 0.08 -1.69 8.14 -51.93 -0.42 -2.11 16 45 H 0.09 -1.56 8.14 -51.93 -0.42 -1.98 16 46 H 0.09 -2.56 8.14 -51.93 -0.42 -2.99 16 47 H 0.09 -2.44 8.14 -51.93 -0.42 -2.86 16 LS Contribution 384.19 15.07 5.79 5.79 Total: 1.00 -43.22 384.19 -12.68 -55.90 By element: Atomic # 1 Polarization: -91.17 SS G_CDS: -6.41 Total: -97.58 kcal Atomic # 6 Polarization: 8.99 SS G_CDS: -3.68 Total: 5.31 kcal Atomic # 7 Polarization: 38.62 SS G_CDS: -0.36 Total: 38.26 kcal Atomic # 8 Polarization: 7.08 SS G_CDS: -0.34 Total: 6.73 kcal Atomic # 14 Polarization: -4.96 SS G_CDS: -5.19 Total: -10.15 kcal Atomic # 16 Polarization: -1.79 SS G_CDS: -2.48 Total: -4.27 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -43.22 -12.68 -55.90 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081482_17119696.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 178.229 kcal (2) G-P(sol) polarization free energy of solvation -43.225 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 135.004 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.677 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -55.902 kcal (6) G-S(sol) free energy of system = (1) + (5) 122.326 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds