Wall clock time and date at job start Mon Mar 8 2021 09:00:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00895 * 1 3 3 H 1.00905 * 109.47207 * 1 2 4 4 H 1.00898 * 109.47218 * 239.99483 * 1 2 3 5 5 C 1.46906 * 109.46832 * 119.99801 * 1 2 3 6 6 H 1.09004 * 109.47040 * 180.02562 * 5 1 2 7 7 C 1.53002 * 109.47248 * 299.99910 * 5 1 2 8 8 C 1.52996 * 109.46969 * 180.02562 * 7 5 1 9 9 C 1.52997 * 109.47131 * 299.99938 * 8 7 5 10 10 H 1.09004 * 109.47261 * 300.00306 * 9 8 7 11 11 N 1.46506 * 109.47289 * 180.02562 * 9 8 7 12 12 C 1.38548 * 119.99728 * 84.99643 * 11 9 8 13 13 C 1.39691 * 120.47810 * 359.73198 * 12 11 9 14 14 C 1.38210 * 118.52636 * 179.72930 * 13 12 11 15 15 N 1.32396 * 119.31075 * 0.53595 * 14 13 12 16 16 C 1.32713 * 120.91527 * 359.72774 * 15 14 13 17 17 C 1.48049 * 119.19687 * 180.02562 * 16 15 14 18 18 C 1.34565 * 122.86615 * 179.68502 * 17 16 15 19 19 S 1.70632 * 110.50928 * 179.91737 * 18 17 16 20 20 C 1.75735 * 91.70505 * 0.28749 * 19 18 17 21 21 C 1.50700 * 125.11014 * 179.79673 * 20 19 18 22 22 O 1.42903 * 109.47182 * 245.04471 * 21 20 19 23 23 Si 1.86297 * 109.47341 * 5.04547 * 21 20 19 24 24 C 1.33109 * 109.77745 * 359.83908 * 20 19 18 25 25 N 1.32669 * 121.60336 * 359.97438 * 16 15 14 26 26 C 1.53002 * 109.47143 * 60.00169 * 9 8 7 27 27 C 1.52996 * 109.46969 * 299.99930 * 26 9 8 28 28 H 1.09004 * 109.47059 * 300.00539 * 7 5 1 29 29 H 1.09004 * 109.46930 * 60.00141 * 7 5 1 30 30 H 1.09001 * 109.46997 * 180.02562 * 8 7 5 31 31 H 1.08996 * 109.47452 * 59.99938 * 8 7 5 32 32 H 0.97000 * 120.00117 * 265.00154 * 11 9 8 33 33 H 1.08005 * 120.73907 * 359.97438 * 13 12 11 34 34 H 1.08000 * 120.34248 * 180.25966 * 14 13 12 35 35 H 1.07999 * 124.74518 * 0.02995 * 18 17 16 36 36 H 1.08997 * 109.47096 * 125.05008 * 21 20 19 37 37 H 0.96703 * 113.99956 * 60.00004 * 22 21 20 38 38 H 1.48496 * 110.00151 * 179.97438 * 23 21 20 39 39 H 1.48506 * 110.00111 * 301.31952 * 23 21 20 40 40 H 1.07995 * 123.13066 * 180.02562 * 24 20 19 41 41 H 1.09004 * 109.46930 * 59.99935 * 26 9 8 42 42 H 1.09004 * 109.47059 * 179.97438 * 26 9 8 43 43 H 1.09001 * 109.46997 * 179.97438 * 27 26 9 44 44 H 1.08992 * 109.47534 * 299.99582 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0089 0.0000 0.0000 3 1 -0.3364 0.9513 0.0000 4 1 -0.3363 -0.4757 0.8238 5 6 -0.4896 -0.6925 -1.1995 6 1 -1.5797 -0.6921 -1.1998 7 6 0.0204 0.0288 -2.4488 8 6 -0.4901 -0.6921 -3.6980 9 6 0.0194 -2.1347 -3.6983 10 1 1.1095 -2.1351 -3.6985 11 7 -0.4688 -2.8249 -4.8948 12 6 0.2272 -2.7190 -6.0881 13 6 1.3926 -1.9524 -6.1630 14 6 2.0580 -1.8793 -7.3721 15 7 1.5701 -2.5243 -8.4204 16 6 0.4576 -3.2412 -8.3227 17 6 -0.0538 -3.9476 -9.5191 18 6 -1.1699 -4.6991 -9.5020 19 16 -1.4678 -5.3622 -11.0457 20 6 -0.0313 -4.5976 -11.7092 21 6 0.4342 -4.7193 -13.1373 22 8 1.6871 -5.4057 -13.1731 23 14 -0.8258 -5.6751 -14.1220 24 6 0.5842 -3.8956 -10.7605 25 7 -0.2069 -3.3412 -7.1788 26 6 -0.4906 -2.8560 -2.4491 27 6 0.0199 -2.1351 -1.1999 28 1 -0.3429 1.0565 -2.4487 29 1 1.1104 0.0288 -2.4487 30 1 -0.1264 -0.1785 -4.5879 31 1 -1.5800 -0.6917 -3.6978 32 1 -1.2795 -3.3558 -4.8516 33 1 1.7675 -1.4316 -5.2942 34 1 2.9640 -1.2985 -7.4620 35 1 -1.7913 -4.8586 -8.6332 36 1 0.5525 -3.7245 -13.5669 37 1 1.6564 -6.2997 -12.8058 38 1 -0.3787 -5.8015 -15.5324 39 1 -1.0197 -7.0221 -13.5274 40 1 1.4921 -3.3373 -10.9345 41 1 -1.5806 -2.8556 -2.4489 42 1 -0.1279 -3.8839 -2.4495 43 1 -0.3438 -2.6487 -0.3099 44 1 1.1098 -2.1355 -1.2000 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081484_17085348.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:00:14 Heat of formation + Delta-G solvation = 168.434790 kcal Electronic energy + Delta-G solvation = -25686.207342 eV Core-core repulsion = 22043.466099 eV Total energy + Delta-G solvation = -3642.741243 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.133 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -43.65729 -42.75772 -40.43525 -39.76637 -38.16401 -37.08386 -34.94836 -34.14933 -33.25972 -31.76470 -30.81892 -27.70223 -27.06199 -26.29696 -25.79751 -24.90130 -23.79850 -23.11267 -21.51422 -21.32916 -21.23983 -20.17242 -19.95163 -19.44779 -18.98411 -18.32759 -17.80686 -17.58724 -17.52163 -17.03540 -17.00523 -16.75123 -16.68291 -16.22072 -15.92230 -15.76351 -15.55359 -15.47196 -14.92540 -14.67816 -14.57527 -14.54306 -14.43449 -14.31687 -14.10961 -13.88078 -13.43531 -13.08046 -13.05163 -12.81309 -12.62310 -12.06891 -11.97338 -11.21484 -11.00274 -10.48581 -10.34855 -9.83380 -5.53809 -1.30291 -1.23089 -0.48224 -0.40592 -0.10475 0.22284 0.55397 0.57111 0.63818 0.73166 0.76021 1.03063 1.07994 1.37579 1.46017 1.47832 1.56007 1.83639 1.90855 2.05659 2.19903 2.21179 2.23487 2.30544 2.42360 2.53979 2.54391 2.67450 2.74161 2.81408 2.85309 3.03249 3.14358 3.17973 3.23872 3.32949 3.48306 3.50759 3.60891 3.77038 3.92562 4.02358 4.19730 4.42772 4.63903 4.78476 4.80822 5.13987 5.51262 5.85204 6.44877 Molecular weight = 334.13amu Principal moments of inertia in cm(-1) A = 0.033269 B = 0.002246 C = 0.002162 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 841.427785 B =12463.850406 C =12948.708497 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.434 0.566 3 H 0.438 0.562 4 H 0.438 0.562 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.140 4.140 8 C -0.138 4.138 9 C 0.151 3.849 10 H 0.091 0.909 11 N -0.714 5.714 12 C 0.442 3.558 13 C -0.307 4.307 14 C 0.187 3.813 15 N -0.544 5.544 16 C 0.433 3.567 17 C -0.075 4.075 18 C -0.187 4.187 19 S 0.196 5.804 20 C -0.243 4.243 21 C -0.030 4.030 22 O -0.523 6.523 23 Si 0.647 3.353 24 C -0.061 4.061 25 N -0.571 5.571 26 C -0.127 4.127 27 C -0.137 4.137 28 H 0.094 0.906 29 H 0.091 0.909 30 H 0.091 0.909 31 H 0.082 0.918 32 H 0.410 0.590 33 H 0.138 0.862 34 H 0.170 0.830 35 H 0.175 0.825 36 H 0.128 0.872 37 H 0.377 0.623 38 H -0.233 1.233 39 H -0.239 1.239 40 H 0.157 0.843 41 H 0.084 0.916 42 H 0.095 0.905 43 H 0.096 0.904 44 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.489 15.460 37.719 40.840 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.262 0.738 3 H 0.267 0.733 4 H 0.266 0.734 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.178 4.178 8 C -0.178 4.178 9 C 0.044 3.956 10 H 0.109 0.891 11 N -0.347 5.347 12 C 0.198 3.802 13 C -0.334 4.334 14 C 0.023 3.977 15 N -0.261 5.261 16 C 0.166 3.834 17 C -0.091 4.091 18 C -0.327 4.327 19 S 0.463 5.537 20 C -0.360 4.360 21 C -0.142 4.142 22 O -0.329 6.329 23 Si 0.545 3.455 24 C -0.091 4.091 25 N -0.294 5.294 26 C -0.165 4.165 27 C -0.176 4.176 28 H 0.113 0.887 29 H 0.110 0.890 30 H 0.109 0.891 31 H 0.101 0.899 32 H 0.247 0.753 33 H 0.156 0.844 34 H 0.187 0.813 35 H 0.193 0.807 36 H 0.146 0.854 37 H 0.225 0.775 38 H -0.156 1.156 39 H -0.163 1.163 40 H 0.174 0.826 41 H 0.103 0.897 42 H 0.114 0.886 43 H 0.115 0.885 44 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -3.914 13.860 35.475 38.287 hybrid contribution 2.022 0.822 2.500 3.319 sum -1.892 14.682 37.975 40.758 Atomic orbital electron populations 1.42641 1.21316 1.20785 1.18650 0.73759 0.73335 0.73372 1.23583 1.04581 0.95706 0.84155 0.83816 1.22061 1.03138 1.00381 0.92225 1.22075 1.02825 0.95639 0.97216 1.21035 0.99878 0.90701 0.83941 0.89126 1.44284 1.29579 1.55108 1.05750 1.18316 0.87787 0.87985 0.86133 1.22091 0.99980 1.09715 1.01662 1.22992 0.96872 0.90972 0.86865 1.68498 1.13551 1.11642 1.32448 1.20519 0.85704 0.88330 0.88843 1.17026 0.97320 1.03009 0.91783 1.25418 1.01355 1.02108 1.03855 1.83366 1.23805 1.47025 0.99527 1.24856 1.01702 1.07934 1.01465 1.24351 0.92631 1.03683 0.93573 1.86648 1.29662 1.32070 1.84519 0.95303 0.85346 0.82852 0.81953 1.20096 1.00656 0.98423 0.89948 1.67824 1.35687 1.26847 0.99051 1.21745 1.02714 1.00883 0.91195 1.22017 1.03273 0.90774 1.01495 0.88731 0.89027 0.89057 0.89917 0.75280 0.84421 0.81329 0.80731 0.85449 0.77478 1.15645 1.16286 0.82582 0.89693 0.88626 0.88512 0.88897 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.61 4.15 -4.66 -0.02 24.59 16 2 H 0.43 -17.22 8.90 -39.29 -0.35 -17.57 16 3 H 0.44 -17.53 8.96 -39.29 -0.35 -17.88 16 4 H 0.44 -17.56 8.96 -39.29 -0.35 -17.91 16 5 C 0.02 -0.77 3.02 -67.71 -0.20 -0.98 16 6 H 0.14 -4.71 8.14 -51.93 -0.42 -5.13 16 7 C -0.14 4.02 5.43 -26.73 -0.15 3.88 16 8 C -0.14 3.17 5.45 -26.73 -0.15 3.02 16 9 C 0.15 -3.19 2.15 -67.93 -0.15 -3.34 16 10 H 0.09 -1.91 6.52 -51.93 -0.34 -2.25 16 11 N -0.71 11.30 5.23 -53.79 -0.28 11.02 16 12 C 0.44 -4.93 7.68 -154.86 -1.19 -6.12 16 13 C -0.31 3.77 8.91 -39.05 -0.35 3.43 16 14 C 0.19 -1.80 11.28 -17.32 -0.20 -1.99 16 15 N -0.54 3.23 9.83 -11.26 -0.11 3.12 16 16 C 0.43 -2.44 7.58 -156.90 -1.19 -3.63 16 17 C -0.08 0.41 5.80 -106.64 -0.62 -0.20 16 18 C -0.19 1.28 10.42 29.43 0.31 1.59 16 19 S 0.20 -1.44 20.33 -107.50 -2.19 -3.63 16 20 C -0.24 1.52 5.68 -36.09 -0.21 1.32 16 21 C -0.03 0.19 2.96 36.01 0.11 0.30 16 22 O -0.52 2.49 12.88 -35.23 -0.45 2.03 16 23 Si 0.65 -4.33 30.97 -169.99 -5.26 -9.59 16 24 C -0.06 0.33 9.65 -40.83 -0.39 -0.07 16 25 N -0.57 4.27 9.85 -10.41 -0.10 4.17 16 26 C -0.13 3.02 5.39 -26.73 -0.14 2.88 16 27 C -0.14 4.01 5.43 -26.73 -0.15 3.86 16 28 H 0.09 -2.75 8.14 -51.93 -0.42 -3.18 16 29 H 0.09 -2.68 8.14 -51.93 -0.42 -3.10 16 30 H 0.09 -1.81 7.71 -51.93 -0.40 -2.21 16 31 H 0.08 -1.82 8.14 -51.93 -0.42 -2.25 16 32 H 0.41 -6.44 8.73 -40.82 -0.36 -6.80 16 33 H 0.14 -2.26 6.26 -52.48 -0.33 -2.58 16 34 H 0.17 -2.10 8.06 -52.49 -0.42 -2.53 16 35 H 0.18 -1.41 7.90 -52.49 -0.41 -1.82 16 36 H 0.13 -0.91 7.96 -51.93 -0.41 -1.32 16 37 H 0.38 -2.87 8.70 45.56 0.40 -2.47 16 38 H -0.23 0.81 7.11 56.52 0.40 1.22 16 39 H -0.24 1.23 7.11 56.52 0.40 1.63 16 40 H 0.16 -0.76 7.90 -52.49 -0.41 -1.17 16 41 H 0.08 -2.00 8.14 -51.93 -0.42 -2.42 16 42 H 0.10 -2.04 8.14 -51.93 -0.42 -2.47 16 43 H 0.10 -2.88 8.14 -51.93 -0.42 -3.30 16 44 H 0.09 -2.73 8.14 -51.93 -0.42 -3.15 16 LS Contribution 365.99 15.07 5.52 5.52 Total: 1.00 -43.62 365.99 -13.89 -57.51 By element: Atomic # 1 Polarization: -92.34 SS G_CDS: -6.33 Total: -98.67 kcal Atomic # 6 Polarization: 8.59 SS G_CDS: -4.66 Total: 3.93 kcal Atomic # 7 Polarization: 43.42 SS G_CDS: -0.51 Total: 42.90 kcal Atomic # 8 Polarization: 2.49 SS G_CDS: -0.45 Total: 2.03 kcal Atomic # 14 Polarization: -4.33 SS G_CDS: -5.26 Total: -9.59 kcal Atomic # 16 Polarization: -1.44 SS G_CDS: -2.19 Total: -3.63 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -43.62 -13.89 -57.51 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081484_17085348.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 225.941 kcal (2) G-P(sol) polarization free energy of solvation -43.621 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 182.320 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.885 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -57.506 kcal (6) G-S(sol) free energy of system = (1) + (5) 168.435 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds