Wall clock time and date at job start Mon Mar 8 2021 09:35:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00901 * 1 3 3 H 1.00906 * 109.47114 * 1 2 4 4 H 1.00902 * 109.47309 * 240.00643 * 1 2 3 5 5 C 1.46901 * 109.47628 * 120.00217 * 1 2 3 6 6 H 1.09001 * 109.46874 * 300.00124 * 5 1 2 7 7 C 1.53000 * 109.46769 * 59.99844 * 5 1 2 8 8 C 1.52997 * 109.47060 * 180.02562 * 7 5 1 9 9 C 1.53006 * 109.47127 * 300.00449 * 8 7 5 10 10 H 1.09001 * 109.47002 * 299.99574 * 9 8 7 11 11 N 1.46504 * 109.46883 * 180.02562 * 9 8 7 12 12 C 1.34773 * 120.00111 * 84.99828 * 11 9 8 13 13 O 1.21544 * 120.00128 * 0.02562 * 12 11 9 14 14 C 1.47886 * 119.99824 * 179.97438 * 12 11 9 15 15 C 1.39997 * 120.06312 * 179.97438 * 14 12 11 16 16 C 1.38360 * 118.02691 * 179.97438 * 15 14 12 17 17 C 1.39869 * 118.00899 * 0.02562 * 16 15 14 18 18 C 1.47961 * 120.08091 * 180.02562 * 17 16 15 19 19 C 1.34648 * 122.88075 * 5.02128 * 18 17 16 20 20 S 1.70633 * 110.50429 * 180.02562 * 19 18 17 21 21 C 1.75726 * 91.71151 * 0.02562 * 20 19 18 22 22 C 1.50700 * 125.10438 * 179.97438 * 21 20 19 23 23 O 1.42898 * 109.47517 * 244.97948 * 22 21 20 24 24 Si 1.86300 * 109.46828 * 4.98005 * 22 21 20 25 25 C 1.33098 * 109.79737 * 359.73004 * 21 20 19 26 26 N 1.33158 * 119.83615 * 0.02562 * 17 16 15 27 27 N 1.28356 * 122.11326 * 359.73084 * 26 17 16 28 28 C 1.52997 * 109.47164 * 59.99836 * 9 8 7 29 29 C 1.52996 * 109.47195 * 179.97438 * 5 1 2 30 30 H 1.09002 * 109.47398 * 300.00295 * 7 5 1 31 31 H 1.09001 * 109.47194 * 60.00475 * 7 5 1 32 32 H 1.08998 * 109.47533 * 59.99948 * 8 7 5 33 33 H 1.08996 * 109.47853 * 180.02562 * 8 7 5 34 34 H 0.97003 * 119.99624 * 264.99510 * 11 9 8 35 35 H 1.08003 * 120.98478 * 359.95779 * 15 14 12 36 36 H 1.08003 * 120.99822 * 180.02562 * 16 15 14 37 37 H 1.08003 * 124.74963 * 359.97438 * 19 18 17 38 38 H 1.09005 * 109.46837 * 124.97328 * 22 21 20 39 39 H 0.96698 * 113.99854 * 180.02562 * 23 22 21 40 40 H 1.48498 * 110.00313 * 178.67792 * 24 22 21 41 41 H 1.48500 * 109.99863 * 299.99979 * 24 22 21 42 42 H 1.08000 * 123.13219 * 180.26442 * 25 21 20 43 43 H 1.09002 * 109.47045 * 180.02562 * 28 9 8 44 44 H 1.09001 * 109.47375 * 59.99966 * 28 9 8 45 45 H 1.08992 * 109.47554 * 299.99900 * 29 5 1 46 46 H 1.09004 * 109.47108 * 60.00150 * 29 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9514 0.0000 4 1 -0.3364 -0.4756 0.8239 5 6 -0.4898 -0.6925 -1.1994 6 1 -0.1265 -0.1787 -2.0894 7 6 0.0202 -2.1350 -1.1993 8 6 -0.4893 -2.8562 -2.4488 9 6 -2.0194 -2.8561 -2.4493 10 1 -2.3831 -3.3700 -1.5595 11 7 -2.5073 -3.5471 -3.6455 12 6 -2.6360 -4.8887 -3.6432 13 8 -2.3478 -5.5253 -2.6487 14 6 -3.1290 -5.5862 -4.8505 15 6 -3.2628 -6.9798 -4.8499 16 6 -3.7283 -7.5887 -6.0017 17 6 -4.0363 -6.7747 -7.0966 18 6 -4.5382 -7.3776 -8.3511 19 6 -4.8136 -8.6901 -8.4723 20 16 -5.3693 -9.0412 -10.0469 21 6 -5.2159 -7.3595 -10.5330 22 6 -5.5447 -6.8194 -11.9009 23 8 -4.3521 -6.3339 -12.5207 24 14 -6.2786 -8.1769 -12.9447 25 6 -4.7709 -6.6334 -9.5102 26 7 -3.8768 -5.4557 -7.0071 27 7 -3.4492 -4.8912 -5.9366 28 6 -2.5293 -1.4136 -2.4494 29 6 -2.0198 -0.6930 -1.1990 30 1 1.1102 -2.1351 -1.1993 31 1 -0.3431 -2.6488 -0.3093 32 1 -0.1257 -2.3423 -3.3386 33 1 -0.1265 -3.8839 -2.4486 34 1 -2.7377 -3.0391 -4.4390 35 1 -3.0098 -7.5622 -3.9762 36 1 -3.8502 -8.6606 -6.0539 37 1 -4.6982 -9.4187 -7.6835 38 1 -6.2629 -6.0048 -11.8069 39 1 -4.4891 -5.9702 -13.4061 40 1 -6.6366 -7.6493 -14.2858 41 1 -5.3092 -9.2936 -13.0804 42 1 -4.6024 -5.5684 -9.5714 43 1 -3.6193 -1.4135 -2.4494 44 1 -2.1656 -0.8996 -3.3392 45 1 -2.3827 -1.2070 -0.3090 46 1 -2.3834 0.3346 -1.1988 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081484_17088014.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:35:15 Heat of formation + Delta-G solvation = 136.618568 kcal Electronic energy + Delta-G solvation = -28797.710405 eV Core-core repulsion = 24706.681174 eV Total energy + Delta-G solvation = -4091.029231 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.133 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -43.55998 -43.05408 -41.60109 -40.04819 -39.23198 -38.32017 -36.10706 -35.15784 -34.62192 -33.96354 -32.19813 -31.18270 -28.26581 -27.51906 -26.29912 -26.12597 -25.53631 -23.89145 -23.41660 -22.96062 -21.45515 -21.28352 -21.19177 -20.41422 -19.89193 -19.55949 -19.18385 -18.88758 -18.53372 -17.75007 -17.70495 -17.40356 -17.19301 -16.84064 -16.68468 -16.34628 -16.26914 -16.12831 -15.71943 -15.56862 -15.26547 -15.09091 -14.79635 -14.73581 -14.62566 -14.49954 -14.42333 -14.34739 -14.17658 -13.62870 -13.49837 -13.26968 -13.24042 -12.90166 -12.36059 -12.24135 -12.16857 -12.11007 -11.68406 -11.41934 -11.14231 -10.45696 -9.94698 -5.61541 -1.76203 -1.19270 -1.11704 -0.67923 -0.21217 0.13267 0.43018 0.64530 0.66288 0.69353 0.75776 0.85790 1.02116 1.07797 1.36912 1.49204 1.59785 1.67774 1.84120 1.85895 1.98997 2.07712 2.22134 2.30421 2.38745 2.42087 2.50454 2.60780 2.69320 2.74332 2.77577 2.86485 2.91020 2.99035 3.09587 3.17308 3.18038 3.31303 3.39703 3.52619 3.64060 3.68298 3.78811 3.80544 3.90942 4.09822 4.14566 4.43253 4.54447 4.67832 5.19883 5.81796 5.91351 6.63719 Molecular weight = 362.13amu Principal moments of inertia in cm(-1) A = 0.023050 B = 0.001752 C = 0.001665 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1214.447056 B =15976.569879 C =16817.089973 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.437 0.563 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.139 4.139 8 C -0.132 4.132 9 C 0.140 3.860 10 H 0.098 0.902 11 N -0.712 5.712 12 C 0.589 3.411 13 O -0.523 6.523 14 C 0.000 4.000 15 C -0.054 4.054 16 C -0.116 4.116 17 C 0.167 3.833 18 C -0.083 4.083 19 C -0.217 4.217 20 S 0.224 5.776 21 C -0.194 4.194 22 C -0.033 4.033 23 O -0.533 6.533 24 Si 0.643 3.357 25 C -0.069 4.069 26 N -0.231 5.231 27 N -0.202 5.202 28 C -0.128 4.128 29 C -0.137 4.137 30 H 0.093 0.907 31 H 0.092 0.908 32 H 0.080 0.920 33 H 0.092 0.908 34 H 0.416 0.584 35 H 0.166 0.834 36 H 0.162 0.838 37 H 0.175 0.825 38 H 0.088 0.912 39 H 0.384 0.616 40 H -0.236 1.236 41 H -0.234 1.234 42 H 0.156 0.844 43 H 0.095 0.905 44 H 0.085 0.915 45 H 0.092 0.908 46 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.978 22.979 26.903 37.353 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.266 0.734 4 H 0.262 0.738 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.177 4.177 8 C -0.172 4.172 9 C 0.035 3.965 10 H 0.116 0.884 11 N -0.364 5.364 12 C 0.373 3.627 13 O -0.397 6.397 14 C -0.147 4.147 15 C -0.083 4.083 16 C -0.145 4.145 17 C 0.025 3.975 18 C -0.099 4.099 19 C -0.356 4.356 20 S 0.492 5.508 21 C -0.311 4.311 22 C -0.145 4.145 23 O -0.341 6.341 24 Si 0.541 3.459 25 C -0.098 4.098 26 N -0.076 5.076 27 N -0.049 5.049 28 C -0.166 4.166 29 C -0.176 4.176 30 H 0.112 0.888 31 H 0.110 0.890 32 H 0.099 0.901 33 H 0.110 0.890 34 H 0.253 0.747 35 H 0.183 0.817 36 H 0.179 0.821 37 H 0.192 0.808 38 H 0.106 0.894 39 H 0.233 0.767 40 H -0.159 1.159 41 H -0.157 1.157 42 H 0.173 0.827 43 H 0.114 0.886 44 H 0.104 0.896 45 H 0.111 0.889 46 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 11.838 21.853 25.752 35.788 hybrid contribution 1.283 1.087 0.765 1.847 sum 13.120 22.940 26.517 37.437 Atomic orbital electron populations 1.42649 1.21231 1.20638 1.18843 0.73400 0.73444 0.73760 1.23595 0.99514 0.97620 0.87278 0.83814 1.22044 1.02711 0.90646 1.02295 1.21950 0.95650 1.02937 0.96622 1.21063 0.93166 0.92403 0.89907 0.88419 1.45764 1.66856 1.06686 1.17095 1.17498 0.77177 0.82139 0.85932 1.90845 1.49592 1.66110 1.33140 1.22565 1.02955 0.93382 0.95779 1.22345 0.92618 0.93968 0.99359 1.22427 0.97212 1.02750 0.92096 1.21173 0.91860 0.91347 0.93131 1.17196 1.07562 0.92297 0.92879 1.25432 1.06317 0.99508 1.04382 1.83381 1.59642 1.06234 1.01505 1.23722 1.11518 0.96907 0.98952 1.23994 0.91107 1.05669 0.93734 1.86595 1.31193 1.81438 1.34840 0.95349 0.86847 0.79866 0.83835 1.20105 0.97785 1.01892 0.90048 1.73429 1.09916 1.09025 1.15231 1.73146 1.04702 1.31650 0.95406 1.21784 1.03431 0.94093 0.97327 1.22028 0.89535 1.04085 1.01917 0.88834 0.88963 0.90112 0.88966 0.74655 0.81651 0.82095 0.80810 0.89383 0.76688 1.15891 1.15727 0.82691 0.88614 0.89627 0.88900 0.88563 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 23.84 4.15 -4.67 -0.02 23.82 16 2 H 0.44 -17.01 8.96 -39.29 -0.35 -17.37 16 3 H 0.44 -17.10 8.96 -39.29 -0.35 -17.45 16 4 H 0.43 -16.65 8.90 -39.29 -0.35 -17.00 16 5 C 0.02 -0.74 3.02 -67.71 -0.20 -0.95 16 6 H 0.14 -4.54 8.14 -51.93 -0.42 -4.96 16 7 C -0.14 3.71 5.43 -26.73 -0.15 3.56 16 8 C -0.13 2.74 5.49 -26.73 -0.15 2.59 16 9 C 0.14 -2.63 2.45 -67.93 -0.17 -2.80 16 10 H 0.10 -1.70 7.57 -51.93 -0.39 -2.10 16 11 N -0.71 10.28 5.07 -54.73 -0.28 10.00 16 12 C 0.59 -6.06 7.77 -12.31 -0.10 -6.16 16 13 O -0.52 4.22 16.04 5.33 0.09 4.30 16 14 C 0.00 0.00 6.83 -82.81 -0.57 -0.56 16 15 C -0.05 0.50 9.71 -38.88 -0.38 0.12 16 16 C -0.12 1.05 9.59 -38.93 -0.37 0.68 16 17 C 0.17 -1.13 6.82 -82.70 -0.56 -1.70 16 18 C -0.08 0.54 5.79 -106.64 -0.62 -0.07 16 19 C -0.22 1.78 10.24 29.46 0.30 2.08 16 20 S 0.22 -1.68 20.33 -107.50 -2.19 -3.86 16 21 C -0.19 1.18 5.71 -36.10 -0.21 0.97 16 22 C -0.03 0.23 2.95 36.01 0.11 0.33 16 23 O -0.53 2.95 12.86 -35.23 -0.45 2.50 16 24 Si 0.64 -4.60 30.97 -169.99 -5.26 -9.86 16 25 C -0.07 0.39 9.68 -40.83 -0.40 0.00 16 26 N -0.23 1.30 11.02 33.37 0.37 1.67 16 27 N -0.20 1.47 10.73 33.33 0.36 1.83 16 28 C -0.13 2.86 5.40 -26.71 -0.14 2.72 16 29 C -0.14 3.81 5.43 -26.71 -0.15 3.66 16 30 H 0.09 -2.56 8.14 -51.93 -0.42 -2.98 16 31 H 0.09 -2.46 8.14 -51.93 -0.42 -2.88 16 32 H 0.08 -1.66 8.14 -51.93 -0.42 -2.09 16 33 H 0.09 -1.55 8.14 -51.93 -0.42 -1.97 16 34 H 0.42 -6.17 7.95 -40.82 -0.32 -6.50 16 35 H 0.17 -1.77 7.71 -52.48 -0.40 -2.17 16 36 H 0.16 -1.93 6.70 -52.48 -0.35 -2.28 16 37 H 0.17 -1.93 6.84 -52.48 -0.36 -2.29 16 38 H 0.09 -0.76 7.96 -51.93 -0.41 -1.18 16 39 H 0.38 -3.62 8.74 45.56 0.40 -3.22 16 40 H -0.24 1.24 7.11 56.52 0.40 1.65 16 41 H -0.23 1.02 7.11 56.52 0.40 1.42 16 42 H 0.16 -0.85 7.95 -52.49 -0.42 -1.26 16 43 H 0.10 -1.94 8.14 -51.93 -0.42 -2.36 16 44 H 0.09 -1.92 8.14 -51.93 -0.42 -2.34 16 45 H 0.09 -2.57 8.14 -51.93 -0.42 -3.00 16 46 H 0.10 -2.76 8.14 -51.93 -0.42 -3.18 16 LS Contribution 389.23 15.07 5.87 5.87 Total: 1.00 -43.20 389.23 -11.58 -54.78 By element: Atomic # 1 Polarization: -89.20 SS G_CDS: -6.32 Total: -95.52 kcal Atomic # 6 Polarization: 8.22 SS G_CDS: -3.74 Total: 4.48 kcal Atomic # 7 Polarization: 36.89 SS G_CDS: 0.43 Total: 37.31 kcal Atomic # 8 Polarization: 7.17 SS G_CDS: -0.37 Total: 6.80 kcal Atomic # 14 Polarization: -4.60 SS G_CDS: -5.26 Total: -9.86 kcal Atomic # 16 Polarization: -1.68 SS G_CDS: -2.19 Total: -3.86 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -43.20 -11.58 -54.78 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081484_17088014.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 191.402 kcal (2) G-P(sol) polarization free energy of solvation -43.199 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 148.203 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.584 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -54.784 kcal (6) G-S(sol) free energy of system = (1) + (5) 136.619 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds