Wall clock time and date at job start Mon Mar 8 2021 09:48:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00900 * 1 3 3 H 1.00908 * 109.46690 * 1 2 4 4 H 1.00897 * 109.46471 * 240.00959 * 1 2 3 5 5 C 1.46896 * 109.47479 * 120.00266 * 1 2 3 6 6 H 1.08993 * 109.47700 * 299.99908 * 5 1 2 7 7 C 1.53001 * 109.46910 * 59.99910 * 5 1 2 8 8 C 1.53001 * 109.47236 * 179.97438 * 7 5 1 9 9 C 1.53006 * 109.46694 * 299.99780 * 8 7 5 10 10 H 1.08988 * 109.47406 * 299.99852 * 9 8 7 11 11 N 1.46508 * 109.46807 * 179.97438 * 9 8 7 12 12 C 1.34774 * 119.99876 * 154.99882 * 11 9 8 13 13 O 1.21592 * 120.00007 * 0.02562 * 12 11 9 14 14 C 1.47582 * 120.00407 * 180.02562 * 12 11 9 15 15 C 1.40144 * 120.84944 * 180.02562 * 14 12 11 16 16 N 1.31902 * 119.03287 * 179.97438 * 15 14 12 17 17 C 1.32888 * 120.87710 * 0.02562 * 16 15 14 18 18 C 1.47806 * 119.06254 * 179.97438 * 17 16 15 19 19 C 1.34755 * 122.90217 * 0.02562 * 18 17 16 20 20 S 1.70628 * 110.49091 * 179.97438 * 19 18 17 21 21 C 1.75722 * 91.72766 * 0.02562 * 20 19 18 22 22 C 1.50696 * 125.08874 * 179.97438 * 21 20 19 23 23 O 1.42902 * 109.47331 * 245.02437 * 22 21 20 24 24 Si 1.86300 * 109.47007 * 5.02393 * 22 21 20 25 25 C 1.33047 * 109.82214 * 0.02562 * 21 20 19 26 26 N 1.32878 * 121.86834 * 0.25520 * 17 16 15 27 27 C 1.31905 * 120.88332 * 359.47604 * 26 17 16 28 28 C 1.53001 * 109.47099 * 60.00136 * 9 8 7 29 29 C 1.52997 * 109.46891 * 179.97438 * 5 1 2 30 30 H 1.09005 * 109.47222 * 59.99777 * 7 5 1 31 31 H 1.09003 * 109.46902 * 299.99921 * 7 5 1 32 32 H 1.09003 * 109.47366 * 180.02562 * 8 7 5 33 33 H 1.08999 * 109.47430 * 59.99449 * 8 7 5 34 34 H 0.96997 * 119.99910 * 335.00402 * 11 9 8 35 35 H 1.07998 * 120.48247 * 359.95930 * 15 14 12 36 36 H 1.08004 * 124.74985 * 0.24647 * 19 18 17 37 37 H 1.09002 * 109.47186 * 125.02188 * 22 21 20 38 38 H 0.96699 * 113.99821 * 59.99428 * 23 22 21 39 39 H 1.48496 * 109.99945 * 179.97438 * 24 22 21 40 40 H 1.48500 * 110.00291 * 301.31845 * 24 22 21 41 41 H 1.08003 * 123.11773 * 180.02562 * 25 21 20 42 42 H 1.07995 * 120.48699 * 180.23448 * 27 26 17 43 43 H 1.09005 * 109.47222 * 59.99746 * 28 9 8 44 44 H 1.08994 * 109.47058 * 179.97438 * 28 9 8 45 45 H 1.09001 * 109.47313 * 299.99708 * 29 5 1 46 46 H 1.08990 * 109.47538 * 60.00505 * 29 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3363 0.9514 0.0000 4 1 -0.3362 -0.4755 0.8239 5 6 -0.4897 -0.6925 -1.1993 6 1 -0.1265 -0.1788 -2.0894 7 6 0.0203 -2.1350 -1.1993 8 6 -0.4903 -2.8566 -2.4481 9 6 -2.0204 -2.8566 -2.4473 10 1 -2.3832 -3.3702 -1.5571 11 7 -2.5093 -3.5470 -3.6434 12 6 -3.7312 -4.1156 -3.6411 13 8 -4.4280 -4.0552 -2.6465 14 6 -4.2236 -4.8115 -4.8458 15 6 -5.4915 -5.4085 -4.8630 16 7 -5.8958 -6.0208 -5.9591 17 6 -5.1187 -6.0761 -7.0356 18 6 -5.6118 -6.7731 -8.2421 19 6 -6.8230 -7.3605 -8.3045 20 16 -7.0658 -8.0672 -9.8385 21 6 -5.4811 -7.5443 -10.3892 22 6 -4.9088 -7.8090 -11.7578 23 8 -3.7672 -8.6604 -11.6403 24 14 -6.1956 -8.6387 -12.8192 25 6 -4.8618 -6.8806 -9.4164 26 7 -3.9087 -5.5272 -7.0563 27 6 -3.4350 -4.8926 -6.0015 28 6 -2.5304 -1.4141 -2.4473 29 6 -2.0197 -0.6930 -1.1989 30 1 -0.3430 -2.6488 -0.3092 31 1 1.1103 -2.1350 -1.1993 32 1 -0.1274 -3.8844 -2.4478 33 1 -0.1275 -2.3429 -3.3384 34 1 -1.9536 -3.5949 -4.4369 35 1 -6.1280 -5.3680 -3.9915 36 1 -7.5412 -7.3775 -7.4981 37 1 -4.6128 -6.8655 -12.2166 38 1 -3.9569 -9.5196 -11.2393 39 1 -5.6438 -8.9046 -14.1719 40 1 -6.6309 -9.9108 -12.1886 41 1 -3.8719 -6.4624 -9.5249 42 1 -2.4522 -4.4457 -6.0266 43 1 -2.1675 -0.9004 -3.3377 44 1 -3.6203 -1.4141 -2.4472 45 1 -2.3827 -1.2071 -0.3089 46 1 -2.3834 0.3344 -1.1988 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081484_17119452.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:48:58 Heat of formation + Delta-G solvation = 128.912864 kcal Electronic energy + Delta-G solvation = -28829.695404 eV Core-core repulsion = 24738.332029 eV Total energy + Delta-G solvation = -4091.363375 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.133 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -43.63708 -43.12494 -41.65774 -40.01021 -39.27133 -38.19417 -36.36867 -35.61694 -34.34803 -34.04039 -32.22258 -31.12452 -28.02565 -27.62149 -26.32600 -26.20326 -25.50892 -24.12051 -23.53991 -22.90854 -21.49014 -21.39923 -21.23900 -20.23019 -19.98637 -19.78697 -19.40680 -18.52833 -18.39832 -17.87679 -17.73465 -17.34482 -17.20557 -16.90641 -16.69687 -16.47325 -16.34406 -16.13700 -15.82687 -15.65241 -15.48132 -15.33496 -14.86570 -14.70920 -14.57863 -14.55603 -14.44044 -14.25693 -14.18333 -13.70516 -13.57144 -13.32069 -13.09083 -12.87940 -12.85336 -12.20910 -12.05779 -11.88444 -11.52213 -11.27682 -11.19771 -10.45565 -9.98902 -5.56588 -1.81273 -1.24472 -0.85415 -0.65222 -0.17871 0.15506 0.51080 0.59469 0.63317 0.69235 0.70015 0.80460 1.04638 1.05420 1.42768 1.43546 1.54158 1.62096 1.85084 1.91241 1.98679 2.03266 2.10238 2.15585 2.29375 2.34454 2.37961 2.46479 2.60952 2.68340 2.76512 2.79398 2.84512 2.91573 3.08597 3.11374 3.22143 3.24083 3.46847 3.56629 3.57717 3.61888 3.85971 3.96224 3.99847 4.23158 4.41650 4.54961 4.66900 4.94285 5.08298 5.79468 5.88662 6.07396 Molecular weight = 362.13amu Principal moments of inertia in cm(-1) A = 0.025030 B = 0.001732 C = 0.001653 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1118.372933 B =16163.482690 C =16935.864406 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.438 0.562 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.138 4.138 8 C -0.128 4.128 9 C 0.141 3.859 10 H 0.098 0.902 11 N -0.727 5.727 12 C 0.581 3.419 13 O -0.524 6.524 14 C -0.271 4.271 15 C 0.225 3.775 16 N -0.515 5.515 17 C 0.418 3.582 18 C -0.089 4.089 19 C -0.179 4.179 20 S 0.213 5.787 21 C -0.245 4.245 22 C -0.029 4.029 23 O -0.523 6.523 24 Si 0.646 3.354 25 C -0.061 4.061 26 N -0.512 5.512 27 C 0.196 3.804 28 C -0.132 4.132 29 C -0.139 4.139 30 H 0.093 0.907 31 H 0.096 0.904 32 H 0.095 0.905 33 H 0.084 0.916 34 H 0.403 0.597 35 H 0.185 0.815 36 H 0.181 0.819 37 H 0.128 0.872 38 H 0.378 0.622 39 H -0.233 1.233 40 H -0.238 1.238 41 H 0.156 0.844 42 H 0.170 0.830 43 H 0.079 0.921 44 H 0.092 0.908 45 H 0.092 0.908 46 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 18.945 24.575 26.627 40.888 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.266 0.734 4 H 0.263 0.737 5 C -0.080 4.080 6 H 0.161 0.839 7 C -0.176 4.176 8 C -0.166 4.166 9 C 0.037 3.963 10 H 0.116 0.884 11 N -0.380 5.380 12 C 0.368 3.632 13 O -0.400 6.400 14 C -0.280 4.280 15 C 0.056 3.944 16 N -0.228 5.228 17 C 0.155 3.845 18 C -0.105 4.105 19 C -0.319 4.319 20 S 0.480 5.520 21 C -0.362 4.362 22 C -0.142 4.142 23 O -0.330 6.330 24 Si 0.545 3.455 25 C -0.091 4.091 26 N -0.225 5.225 27 C 0.026 3.974 28 C -0.171 4.171 29 C -0.178 4.178 30 H 0.111 0.889 31 H 0.114 0.886 32 H 0.113 0.887 33 H 0.102 0.898 34 H 0.239 0.761 35 H 0.202 0.798 36 H 0.198 0.802 37 H 0.146 0.854 38 H 0.226 0.774 39 H -0.156 1.156 40 H -0.162 1.162 41 H 0.174 0.826 42 H 0.187 0.813 43 H 0.098 0.902 44 H 0.111 0.889 45 H 0.111 0.889 46 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 16.892 22.961 24.853 37.818 hybrid contribution 2.603 0.830 2.159 3.483 sum 19.495 23.791 27.013 40.936 Atomic orbital electron populations 1.42643 1.21176 1.20733 1.18831 0.73436 0.73363 0.73725 1.23578 0.99676 0.97404 0.87303 0.83857 1.22019 1.02781 0.90889 1.01938 1.21780 0.94443 1.03069 0.97358 1.21029 0.92940 0.92423 0.89956 0.88364 1.45811 1.18035 1.57348 1.16772 1.17730 0.81065 0.77570 0.86864 1.90848 1.55966 1.59237 1.33947 1.21588 1.00068 1.09050 0.97272 1.23531 0.91235 0.84297 0.95310 1.68601 1.35623 1.18540 1.00028 1.21152 0.84981 0.87630 0.90735 1.17030 0.95308 1.05599 0.92549 1.25629 1.00781 1.01692 1.03828 1.83453 1.14351 1.50873 1.03304 1.24876 0.99612 1.09589 1.02153 1.24345 0.95153 0.99845 0.94846 1.86637 1.32127 1.30278 1.83944 0.95260 0.83679 0.85086 0.81485 1.20063 1.01059 0.97747 0.90200 1.68477 1.14204 1.10790 1.29058 1.23362 0.98174 0.89250 0.86565 1.21935 1.03667 0.94943 0.96562 1.22038 0.89255 1.04125 1.02350 0.88874 0.88564 0.88679 0.89771 0.76081 0.79831 0.80172 0.85422 0.77412 1.15559 1.16180 0.82614 0.81277 0.90229 0.88902 0.88943 0.88808 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.22 4.15 -4.67 -0.02 24.20 16 2 H 0.44 -17.35 8.96 -39.29 -0.35 -17.70 16 3 H 0.44 -17.27 8.96 -39.29 -0.35 -17.62 16 4 H 0.43 -16.88 8.90 -39.29 -0.35 -17.23 16 5 C 0.02 -0.78 3.03 -67.72 -0.20 -0.98 16 6 H 0.14 -4.66 8.14 -51.93 -0.42 -5.08 16 7 C -0.14 3.95 5.43 -26.73 -0.15 3.81 16 8 C -0.13 3.05 5.39 -26.73 -0.14 2.91 16 9 C 0.14 -2.88 2.45 -67.92 -0.17 -3.04 16 10 H 0.10 -1.81 7.58 -51.94 -0.39 -2.20 16 11 N -0.73 12.36 5.03 -54.83 -0.28 12.09 16 12 C 0.58 -7.06 7.74 -12.45 -0.10 -7.16 16 13 O -0.52 4.63 16.10 5.28 0.09 4.72 16 14 C -0.27 2.85 5.91 -104.65 -0.62 2.24 16 15 C 0.22 -1.86 10.87 -16.81 -0.18 -2.04 16 16 N -0.51 3.17 9.78 -10.87 -0.11 3.06 16 17 C 0.42 -2.44 7.57 -156.67 -1.19 -3.63 16 18 C -0.09 0.51 5.80 -106.65 -0.62 -0.11 16 19 C -0.18 1.19 10.43 29.50 0.31 1.50 16 20 S 0.21 -1.58 20.32 -107.50 -2.18 -3.77 16 21 C -0.25 1.67 5.68 -36.11 -0.21 1.46 16 22 C -0.03 0.20 2.96 36.00 0.11 0.31 16 23 O -0.52 2.85 12.88 -35.23 -0.45 2.40 16 24 Si 0.65 -4.53 30.97 -169.99 -5.26 -9.80 16 25 C -0.06 0.37 9.65 -40.82 -0.39 -0.02 16 26 N -0.51 3.74 9.81 -10.86 -0.11 3.64 16 27 C 0.20 -2.15 10.80 -16.80 -0.18 -2.33 16 28 C -0.13 2.88 5.49 -26.76 -0.15 2.74 16 29 C -0.14 3.84 5.42 -26.76 -0.15 3.69 16 30 H 0.09 -2.65 8.14 -51.93 -0.42 -3.07 16 31 H 0.10 -2.84 8.14 -51.93 -0.42 -3.26 16 32 H 0.09 -2.07 8.14 -51.93 -0.42 -2.49 16 33 H 0.08 -2.04 8.14 -51.93 -0.42 -2.46 16 34 H 0.40 -7.66 6.72 -40.82 -0.27 -7.94 16 35 H 0.18 -1.76 7.73 -52.49 -0.41 -2.16 16 36 H 0.18 -1.36 7.89 -52.48 -0.41 -1.77 16 37 H 0.13 -1.01 7.96 -51.93 -0.41 -1.42 16 38 H 0.38 -3.09 8.70 45.56 0.40 -2.69 16 39 H -0.23 0.90 7.11 56.52 0.40 1.30 16 40 H -0.24 1.28 7.11 56.52 0.40 1.68 16 41 H 0.16 -0.96 7.90 -52.48 -0.41 -1.38 16 42 H 0.17 -2.65 6.52 -52.49 -0.34 -3.00 16 43 H 0.08 -1.76 8.14 -51.93 -0.42 -2.18 16 44 H 0.09 -1.65 8.14 -51.93 -0.42 -2.08 16 45 H 0.09 -2.52 8.14 -51.93 -0.42 -2.94 16 46 H 0.09 -2.63 8.14 -51.93 -0.42 -3.05 16 LS Contribution 388.99 15.07 5.86 5.86 Total: 1.00 -44.20 388.99 -12.80 -57.00 By element: Atomic # 1 Polarization: -92.43 SS G_CDS: -6.32 Total: -98.75 kcal Atomic # 6 Polarization: 3.37 SS G_CDS: -4.02 Total: -0.66 kcal Atomic # 7 Polarization: 43.49 SS G_CDS: -0.51 Total: 42.98 kcal Atomic # 8 Polarization: 7.49 SS G_CDS: -0.37 Total: 7.12 kcal Atomic # 14 Polarization: -4.53 SS G_CDS: -5.26 Total: -9.80 kcal Atomic # 16 Polarization: -1.58 SS G_CDS: -2.18 Total: -3.77 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -44.20 -12.80 -57.00 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081484_17119452.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 185.918 kcal (2) G-P(sol) polarization free energy of solvation -44.202 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 141.716 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.803 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -57.005 kcal (6) G-S(sol) free energy of system = (1) + (5) 128.913 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds