Wall clock time and date at job start Mon Mar 8 2021 09:52:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00899 * 1 3 3 H 1.00895 * 109.47565 * 1 2 4 4 H 1.00897 * 109.47658 * 239.99659 * 1 2 3 5 5 C 1.46905 * 109.46689 * 120.00182 * 1 2 3 6 6 H 1.09002 * 109.46952 * 180.02562 * 5 1 2 7 7 C 1.52998 * 109.47245 * 299.99782 * 5 1 2 8 8 C 1.52993 * 109.47132 * 179.97438 * 7 5 1 9 9 C 1.53000 * 109.47339 * 299.99964 * 8 7 5 10 10 H 1.08996 * 109.47156 * 300.00033 * 9 8 7 11 11 N 1.46504 * 109.47144 * 179.97438 * 9 8 7 12 12 C 1.34786 * 119.99525 * 85.00224 * 11 9 8 13 13 O 1.21586 * 119.99977 * 0.02562 * 12 11 9 14 14 C 1.47585 * 119.99705 * 179.97438 * 12 11 9 15 15 C 1.40269 * 120.44526 * 180.02562 * 14 12 11 16 16 C 1.36933 * 118.51311 * 180.02562 * 15 14 12 17 17 C 1.39619 * 119.34901 * 359.97438 * 16 15 14 18 18 C 1.47966 * 119.57075 * 179.97438 * 17 16 15 19 19 C 1.34651 * 122.88162 * 359.71473 * 18 17 16 20 20 S 1.70625 * 110.49947 * 179.85609 * 19 18 17 21 21 C 1.75727 * 91.71717 * 0.34224 * 20 19 18 22 22 C 1.50700 * 125.10089 * 179.84584 * 21 20 19 23 23 O 1.42899 * 109.46514 * 244.95309 * 22 21 20 24 24 Si 1.86293 * 109.47293 * 4.95255 * 22 21 20 25 25 C 1.33098 * 109.79339 * 359.80123 * 21 20 19 26 26 N 1.32917 * 120.85488 * 0.28414 * 17 16 15 27 27 C 1.31535 * 121.61136 * 359.42251 * 26 17 16 28 28 C 1.53000 * 109.46742 * 60.00579 * 9 8 7 29 29 C 1.53001 * 109.47174 * 60.00127 * 5 1 2 30 30 H 1.08997 * 109.47230 * 300.00316 * 7 5 1 31 31 H 1.09005 * 109.46547 * 59.99887 * 7 5 1 32 32 H 1.09003 * 109.47258 * 180.02562 * 8 7 5 33 33 H 1.09005 * 109.47415 * 60.00519 * 8 7 5 34 34 H 0.96993 * 120.00616 * 265.00815 * 11 9 8 35 35 H 1.08003 * 120.74113 * 0.02562 * 15 14 12 36 36 H 1.08004 * 120.32468 * 179.97438 * 16 15 14 37 37 H 1.07999 * 124.74447 * 359.97438 * 19 18 17 38 38 H 1.09000 * 109.47366 * 124.95937 * 22 21 20 39 39 H 0.96700 * 114.00529 * 60.00291 * 23 22 21 40 40 H 1.48493 * 109.99928 * 58.68796 * 24 22 21 41 41 H 1.48500 * 109.99835 * 180.02562 * 24 22 21 42 42 H 1.08001 * 123.12489 * 180.02562 * 25 21 20 43 43 H 1.08001 * 119.71832 * 180.26652 * 27 26 17 44 44 H 1.08996 * 109.47741 * 59.99812 * 28 9 8 45 45 H 1.09007 * 109.47046 * 179.97438 * 28 9 8 46 46 H 1.09003 * 109.47085 * 59.99686 * 29 5 1 47 47 H 1.08996 * 109.46847 * 299.99773 * 29 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9512 0.0000 4 1 -0.3364 -0.4757 0.8238 5 6 -0.4896 -0.6926 -1.1995 6 1 -1.5796 -0.6922 -1.1998 7 6 0.0204 0.0287 -2.4487 8 6 -0.4889 -0.6930 -3.6979 9 6 0.0217 -2.1353 -3.6976 10 1 1.1116 -2.1348 -3.6973 11 7 -0.4666 -2.8265 -4.8934 12 6 0.2101 -2.7238 -6.0546 13 8 1.2259 -2.0579 -6.1094 14 6 -0.2815 -3.4205 -7.2592 15 6 0.4156 -3.3205 -8.4723 16 6 -0.0761 -3.9828 -9.5653 17 6 -1.2473 -4.7327 -9.4413 18 6 -1.7833 -5.4498 -10.6194 19 6 -1.1930 -5.4123 -11.8290 20 16 -2.0712 -6.3500 -12.9518 21 6 -3.2641 -6.7838 -11.7365 22 6 -4.4639 -7.6638 -11.9753 23 8 -5.6580 -6.8979 -11.8033 24 14 -4.4036 -8.3387 -13.7107 25 6 -2.9483 -6.2192 -10.5733 26 7 -1.8902 -4.8058 -8.2803 27 6 -1.4469 -4.1887 -7.2066 28 6 -0.4885 -2.8565 -2.4484 29 6 0.0204 -2.1351 -1.1994 30 1 -0.3429 1.0563 -2.4488 31 1 1.1105 0.0287 -2.4486 32 1 -0.1252 -0.1795 -4.5879 33 1 -1.5790 -0.6934 -3.6983 34 1 -1.2768 -3.3579 -4.8497 35 1 1.3200 -2.7342 -8.5427 36 1 0.4370 -3.9256 -10.5140 37 1 -0.2891 -4.8666 -12.0561 38 1 -4.4563 -8.4895 -11.2638 39 1 -5.7324 -6.1447 -12.4051 40 1 -3.1512 -9.1106 -13.9121 41 1 -5.5819 -9.2077 -13.9589 42 1 -3.5378 -6.3445 -9.6771 43 1 -1.9914 -4.2724 -6.2777 44 1 -1.5785 -2.8570 -2.4486 45 1 -0.1251 -3.8842 -2.4483 46 1 -0.3429 -2.6489 -0.3094 47 1 1.1104 -2.1350 -1.1994 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081484_17119696.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:52:22 Heat of formation + Delta-G solvation = 112.412701 kcal Electronic energy + Delta-G solvation = -28689.172910 eV Core-core repulsion = 24662.519945 eV Total energy + Delta-G solvation = -4026.652965 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.137 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -43.57650 -42.61989 -41.40678 -39.85452 -39.18336 -38.06846 -36.11708 -34.51226 -34.00643 -33.93618 -31.97859 -30.85243 -27.87702 -27.22914 -26.16165 -25.51958 -25.19083 -23.84165 -23.43719 -22.68228 -21.44276 -21.22610 -21.20180 -20.19899 -19.88100 -19.41455 -19.04589 -18.37123 -18.07943 -17.64383 -17.45970 -17.23018 -16.97319 -16.81248 -16.75124 -16.22402 -16.09852 -15.91609 -15.82090 -15.56179 -15.29119 -15.15717 -14.85643 -14.75118 -14.54767 -14.51440 -14.34589 -14.27546 -14.22256 -14.11995 -13.53427 -13.27437 -13.08826 -12.70222 -12.31205 -12.26403 -11.88048 -11.52016 -11.39845 -11.33473 -11.07457 -10.44238 -9.78493 -5.67021 -1.60449 -1.22123 -0.64147 -0.57969 -0.15001 0.17915 0.59876 0.66266 0.66669 0.70501 0.74477 0.84333 1.08473 1.18711 1.42299 1.46525 1.56869 1.65268 1.93668 2.02742 2.09368 2.18427 2.22091 2.34068 2.38803 2.49796 2.65828 2.67946 2.76627 2.82871 2.85154 2.89652 2.91897 3.07321 3.12788 3.19072 3.26563 3.33381 3.49264 3.51453 3.61481 3.68994 3.82180 3.90944 4.02587 4.10609 4.16194 4.41664 4.58815 4.65647 4.74963 5.18960 5.94558 5.96404 6.02606 Molecular weight = 361.14amu Principal moments of inertia in cm(-1) A = 0.023837 B = 0.001735 C = 0.001652 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1174.353703 B =16134.224631 C =16941.256348 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.434 0.566 3 H 0.437 0.563 4 H 0.437 0.563 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.139 4.139 8 C -0.132 4.132 9 C 0.141 3.859 10 H 0.097 0.903 11 N -0.728 5.728 12 C 0.574 3.426 13 O -0.529 6.529 14 C -0.210 4.210 15 C -0.005 4.005 16 C -0.170 4.170 17 C 0.230 3.770 18 C -0.086 4.086 19 C -0.216 4.216 20 S 0.203 5.797 21 C -0.244 4.244 22 C -0.024 4.024 23 O -0.534 6.534 24 Si 0.653 3.347 25 C -0.067 4.067 26 N -0.479 5.479 27 C 0.148 3.852 28 C -0.128 4.128 29 C -0.138 4.138 30 H 0.093 0.907 31 H 0.092 0.908 32 H 0.092 0.908 33 H 0.079 0.921 34 H 0.404 0.596 35 H 0.151 0.849 36 H 0.146 0.854 37 H 0.173 0.827 38 H 0.124 0.876 39 H 0.381 0.619 40 H -0.237 1.237 41 H -0.232 1.232 42 H 0.154 0.846 43 H 0.158 0.842 44 H 0.083 0.917 45 H 0.094 0.906 46 H 0.096 0.904 47 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.412 19.099 33.780 39.181 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.263 0.737 3 H 0.266 0.734 4 H 0.266 0.734 5 C -0.080 4.080 6 H 0.161 0.839 7 C -0.178 4.178 8 C -0.171 4.171 9 C 0.036 3.964 10 H 0.115 0.885 11 N -0.381 5.381 12 C 0.362 3.638 13 O -0.405 6.405 14 C -0.216 4.216 15 C -0.031 4.031 16 C -0.191 4.191 17 C 0.092 3.908 18 C -0.101 4.101 19 C -0.355 4.355 20 S 0.471 5.529 21 C -0.361 4.361 22 C -0.137 4.137 23 O -0.339 6.339 24 Si 0.552 3.448 25 C -0.096 4.096 26 N -0.188 5.188 27 C -0.012 4.012 28 C -0.167 4.167 29 C -0.176 4.176 30 H 0.112 0.888 31 H 0.110 0.890 32 H 0.110 0.890 33 H 0.098 0.902 34 H 0.240 0.760 35 H 0.168 0.832 36 H 0.164 0.836 37 H 0.190 0.810 38 H 0.141 0.859 39 H 0.228 0.772 40 H -0.161 1.161 41 H -0.155 1.155 42 H 0.172 0.828 43 H 0.175 0.825 44 H 0.102 0.898 45 H 0.113 0.887 46 H 0.114 0.886 47 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 5.390 17.410 31.934 36.769 hybrid contribution 0.569 0.845 2.465 2.667 sum 5.958 18.256 34.398 39.396 Atomic orbital electron populations 1.42645 1.21348 1.20746 1.18634 0.73739 0.73382 0.73448 1.23585 1.04462 0.95738 0.84176 0.83855 1.22048 1.03307 1.00236 0.92162 1.21944 1.02112 0.95621 0.97415 1.21005 1.00773 0.90695 0.83896 0.88493 1.45848 1.29845 1.53060 1.09330 1.18021 0.83046 0.80058 0.82677 1.90825 1.24260 1.40656 1.84768 1.20820 1.00101 1.05292 0.95377 1.21392 0.97925 0.93512 0.90293 1.21843 0.97459 0.99168 1.00618 1.19658 0.89766 0.90755 0.90573 1.17472 0.97788 1.03125 0.91684 1.25408 1.06163 1.06231 0.97704 1.83276 1.16386 1.41529 1.11701 1.24978 1.03960 1.09357 0.97768 1.24389 0.81855 0.95571 1.11876 1.86536 1.37921 1.45658 1.63821 0.95134 0.83186 0.87800 0.78685 1.20125 0.95310 0.95590 0.98546 1.67772 1.31933 1.20443 0.98626 1.22858 0.91482 0.90154 0.96744 1.21770 1.02503 1.00868 0.91513 1.22007 1.03355 0.90794 1.01448 0.88837 0.88988 0.88953 0.90233 0.76004 0.83172 0.83615 0.81003 0.85908 0.77155 1.16142 1.15450 0.82831 0.82508 0.89790 0.88696 0.88590 0.88910 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.01 4.15 -4.66 -0.02 23.99 16 2 H 0.43 -16.74 8.90 -39.29 -0.35 -17.09 16 3 H 0.44 -17.13 8.96 -39.29 -0.35 -17.48 16 4 H 0.44 -17.21 8.96 -39.29 -0.35 -17.56 16 5 C 0.02 -0.77 3.03 -67.71 -0.20 -0.97 16 6 H 0.14 -4.59 8.14 -51.93 -0.42 -5.02 16 7 C -0.14 3.77 5.43 -26.74 -0.15 3.62 16 8 C -0.13 2.80 5.49 -26.73 -0.15 2.65 16 9 C 0.14 -2.77 2.45 -67.93 -0.17 -2.94 16 10 H 0.10 -1.71 7.58 -51.93 -0.39 -2.10 16 11 N -0.73 11.71 5.03 -54.83 -0.28 11.44 16 12 C 0.57 -6.44 7.74 -12.44 -0.10 -6.54 16 13 O -0.53 4.16 16.07 5.29 0.09 4.24 16 14 C -0.21 2.10 5.89 -104.78 -0.62 1.48 16 15 C -0.01 0.05 9.65 -39.29 -0.38 -0.33 16 16 C -0.17 1.47 9.45 -39.54 -0.37 1.09 16 17 C 0.23 -1.59 6.74 -82.90 -0.56 -2.15 16 18 C -0.09 0.56 5.79 -106.64 -0.62 -0.06 16 19 C -0.22 1.72 10.22 29.46 0.30 2.02 16 20 S 0.20 -1.60 20.33 -107.50 -2.19 -3.78 16 21 C -0.24 1.63 5.68 -36.10 -0.21 1.43 16 22 C -0.02 0.16 2.96 36.01 0.11 0.26 16 23 O -0.53 3.30 12.88 -35.23 -0.45 2.85 16 24 Si 0.65 -4.55 30.97 -169.99 -5.26 -9.81 16 25 C -0.07 0.40 9.66 -40.83 -0.39 0.00 16 26 N -0.48 3.43 9.80 -9.46 -0.09 3.33 16 27 C 0.15 -1.52 10.71 -17.14 -0.18 -1.70 16 28 C -0.13 2.97 5.39 -26.76 -0.14 2.83 16 29 C -0.14 3.88 5.43 -26.76 -0.15 3.74 16 30 H 0.09 -2.59 8.14 -51.93 -0.42 -3.01 16 31 H 0.09 -2.46 8.14 -51.93 -0.42 -2.89 16 32 H 0.09 -1.58 8.14 -51.93 -0.42 -2.00 16 33 H 0.08 -1.70 8.14 -51.93 -0.42 -2.13 16 34 H 0.40 -7.25 6.65 -40.82 -0.27 -7.52 16 35 H 0.15 -1.43 7.72 -52.48 -0.41 -1.84 16 36 H 0.15 -1.55 6.56 -52.48 -0.34 -1.89 16 37 H 0.17 -1.78 6.74 -52.49 -0.35 -2.13 16 38 H 0.12 -0.80 7.96 -51.93 -0.41 -1.22 16 39 H 0.38 -3.79 8.70 45.56 0.40 -3.40 16 40 H -0.24 1.16 7.11 56.52 0.40 1.56 16 41 H -0.23 0.90 7.11 56.52 0.40 1.30 16 42 H 0.15 -0.86 7.92 -52.49 -0.42 -1.27 16 43 H 0.16 -2.25 6.41 -52.49 -0.34 -2.58 16 44 H 0.08 -1.98 8.14 -51.93 -0.42 -2.40 16 45 H 0.09 -2.01 8.14 -51.93 -0.42 -2.43 16 46 H 0.10 -2.79 8.14 -51.93 -0.42 -3.21 16 47 H 0.09 -2.60 8.14 -51.93 -0.42 -3.02 16 LS Contribution 391.49 15.07 5.90 5.90 Total: 1.00 -43.87 391.49 -12.87 -56.74 By element: Atomic # 1 Polarization: -92.74 SS G_CDS: -6.59 Total: -99.33 kcal Atomic # 6 Polarization: 8.41 SS G_CDS: -3.97 Total: 4.43 kcal Atomic # 7 Polarization: 39.15 SS G_CDS: -0.39 Total: 38.76 kcal Atomic # 8 Polarization: 7.46 SS G_CDS: -0.37 Total: 7.09 kcal Atomic # 14 Polarization: -4.55 SS G_CDS: -5.26 Total: -9.81 kcal Atomic # 16 Polarization: -1.60 SS G_CDS: -2.19 Total: -3.78 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -43.87 -12.87 -56.74 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081484_17119696.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 169.151 kcal (2) G-P(sol) polarization free energy of solvation -43.867 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 125.284 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.871 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -56.738 kcal (6) G-S(sol) free energy of system = (1) + (5) 112.413 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds