Wall clock time and date at job start Mon Mar 8 2021 06:15:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00894 * 1 3 3 H 1.00906 * 109.47313 * 1 2 4 4 H 1.00900 * 109.47392 * 240.00084 * 1 2 3 5 5 C 1.46905 * 109.47148 * 119.99608 * 1 2 3 6 6 H 1.09002 * 109.47057 * 180.02562 * 5 1 2 7 7 C 1.53000 * 109.47141 * 300.00169 * 5 1 2 8 8 C 1.52993 * 109.46880 * 179.97438 * 7 5 1 9 9 C 1.53003 * 109.47395 * 299.99807 * 8 7 5 10 10 H 1.08998 * 109.46973 * 300.00493 * 9 8 7 11 11 N 1.46499 * 109.47006 * 179.97438 * 9 8 7 12 12 C 1.38552 * 119.99802 * 85.00305 * 11 9 8 13 13 C 1.39732 * 120.47077 * 359.97438 * 12 11 9 14 14 C 1.38235 * 118.56047 * 180.02562 * 13 12 11 15 15 N 1.32364 * 119.32462 * 359.72957 * 14 13 12 16 16 C 1.32854 * 120.90022 * 0.54565 * 15 14 13 17 17 C 1.47543 * 119.21267 * 179.71387 * 16 15 14 18 18 C 1.34956 * 125.27453 * 359.73482 * 17 16 15 19 19 C 1.37736 * 114.71836 * 180.02562 * 18 17 16 20 20 C 1.33775 * 115.08251 * 359.97438 * 19 18 17 21 21 C 1.50707 * 125.12627 * 179.97438 * 20 19 18 22 22 O 1.42903 * 109.46442 * 65.00472 * 21 20 19 23 23 Si 1.86293 * 109.47256 * 185.00039 * 21 20 19 24 24 S 1.75857 * 109.75016 * 0.26569 * 20 19 18 25 25 N 1.32814 * 120.47179 * 179.97438 * 12 11 9 26 26 C 1.53000 * 109.46949 * 60.00235 * 9 8 7 27 27 C 1.52996 * 109.46889 * 60.00132 * 5 1 2 28 28 H 1.09004 * 109.46999 * 299.99569 * 7 5 1 29 29 H 1.08998 * 109.47072 * 59.99526 * 7 5 1 30 30 H 1.08999 * 109.47216 * 179.97438 * 8 7 5 31 31 H 1.08998 * 109.47463 * 60.00001 * 8 7 5 32 32 H 0.97001 * 120.00480 * 265.00136 * 11 9 8 33 33 H 1.08002 * 120.71613 * 359.97438 * 13 12 11 34 34 H 1.07997 * 120.33986 * 180.02562 * 14 13 12 35 35 H 1.07994 * 122.64413 * 0.04034 * 18 17 16 36 36 H 1.08005 * 122.45606 * 179.97438 * 19 18 17 37 37 H 1.08999 * 109.47345 * 305.00543 * 21 20 19 38 38 H 0.96700 * 114.00311 * 60.00230 * 22 21 20 39 39 H 1.48506 * 109.99973 * 180.02562 * 23 21 20 40 40 H 1.48493 * 110.00375 * 301.32185 * 23 21 20 41 41 H 1.09002 * 109.47212 * 59.99832 * 26 9 8 42 42 H 1.08997 * 109.47349 * 180.02562 * 26 9 8 43 43 H 1.08999 * 109.47302 * 59.99597 * 27 5 1 44 44 H 1.09002 * 109.47234 * 299.99846 * 27 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0089 0.0000 0.0000 3 1 -0.3364 0.9513 0.0000 4 1 -0.3364 -0.4756 0.8238 5 6 -0.4897 -0.6924 -1.1995 6 1 -1.5797 -0.6920 -1.1997 7 6 0.0203 0.0289 -2.4487 8 6 -0.4891 -0.6927 -3.6979 9 6 0.0214 -2.1350 -3.6977 10 1 1.1113 -2.1346 -3.6974 11 7 -0.4671 -2.8260 -4.8936 12 6 0.2284 -2.7204 -6.0873 13 6 1.3964 -1.9571 -6.1617 14 6 2.0586 -1.8785 -7.3726 15 7 1.5746 -2.5281 -8.4194 16 6 0.4589 -3.2428 -8.3228 17 6 -0.0508 -3.9469 -9.5150 18 6 0.5246 -3.9297 -10.7356 19 6 -0.1368 -4.6646 -11.6946 20 6 -1.2454 -5.2822 -11.2712 21 6 -2.1397 -6.1419 -12.1270 22 8 -1.4221 -7.3036 -12.5485 23 14 -3.6334 -6.6585 -11.1408 24 16 -1.5063 -4.9331 -9.5675 25 7 -0.2056 -3.3434 -7.1770 26 6 -0.4887 -2.8563 -2.4485 27 6 0.0203 -2.1349 -1.1996 28 1 -0.3431 1.0566 -2.4487 29 1 1.1103 0.0289 -2.4487 30 1 -0.1262 -0.1786 -4.5879 31 1 -1.5791 -0.6931 -3.6982 32 1 -1.2773 -3.3575 -4.8498 33 1 1.7732 -1.4390 -5.2921 34 1 2.9641 -1.2969 -7.4624 35 1 1.4323 -3.3830 -10.9441 36 1 0.2138 -4.7368 -12.7136 37 1 -2.4598 -5.5754 -13.0014 38 1 -1.1063 -7.8564 -11.8207 39 1 -4.5230 -7.5073 -11.9734 40 1 -3.2088 -7.4044 -9.9290 41 1 -1.5787 -2.8567 -2.4487 42 1 -0.1247 -3.8837 -2.4481 43 1 -0.3430 -2.6488 -0.3096 44 1 1.1103 -2.1349 -1.1996 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081486_17085348.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:15:30 Heat of formation + Delta-G solvation = 169.891147 kcal Electronic energy + Delta-G solvation = -25639.873972 eV Core-core repulsion = 21997.195881 eV Total energy + Delta-G solvation = -3642.678091 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.133 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -43.66820 -42.74527 -40.32824 -39.81633 -38.13746 -37.15743 -35.10001 -34.16797 -33.66348 -31.56841 -30.80013 -28.28070 -26.39015 -26.05173 -25.53717 -24.92432 -24.08555 -23.43592 -21.55467 -21.32984 -21.20000 -20.11307 -20.01584 -19.77183 -18.63365 -18.31968 -17.83600 -17.55651 -17.45313 -17.06376 -17.04278 -16.81999 -16.71843 -16.27305 -16.20884 -15.82908 -15.50202 -15.41810 -14.94594 -14.72179 -14.64313 -14.46330 -14.33821 -14.31149 -14.07539 -13.89394 -13.44791 -13.11792 -13.07209 -12.84925 -12.65811 -12.08801 -12.06866 -11.27260 -11.07739 -10.55084 -10.06933 -9.97573 -5.61140 -1.49588 -1.30805 -0.53354 -0.28718 -0.20982 0.22446 0.52887 0.56470 0.62770 0.67215 0.74623 1.01101 1.11928 1.36835 1.38508 1.47095 1.55208 1.82523 1.89293 2.03104 2.08326 2.14531 2.20015 2.25572 2.40805 2.52528 2.54456 2.66198 2.73368 2.74411 2.79670 3.02497 3.11288 3.13412 3.17716 3.31298 3.41089 3.46775 3.65499 3.82520 3.94753 4.00547 4.14602 4.53043 4.55545 4.73239 4.83606 5.08964 5.45615 5.78387 6.34528 Molecular weight = 334.13amu Principal moments of inertia in cm(-1) A = 0.021525 B = 0.002536 C = 0.002334 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1300.525385 B =11038.723944 C =11995.476808 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.434 0.566 3 H 0.438 0.562 4 H 0.438 0.562 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.140 4.140 8 C -0.138 4.138 9 C 0.150 3.850 10 H 0.091 0.909 11 N -0.713 5.713 12 C 0.445 3.555 13 C -0.304 4.304 14 C 0.189 3.811 15 N -0.541 5.541 16 C 0.443 3.557 17 C -0.161 4.161 18 C -0.067 4.067 19 C -0.115 4.115 20 C -0.209 4.209 21 C -0.035 4.035 22 O -0.521 6.521 23 Si 0.647 3.353 24 S 0.181 5.819 25 N -0.572 5.572 26 C -0.127 4.127 27 C -0.137 4.137 28 H 0.094 0.906 29 H 0.091 0.909 30 H 0.091 0.909 31 H 0.083 0.917 32 H 0.411 0.589 33 H 0.140 0.860 34 H 0.172 0.828 35 H 0.155 0.845 36 H 0.150 0.850 37 H 0.131 0.869 38 H 0.378 0.622 39 H -0.232 1.232 40 H -0.240 1.240 41 H 0.085 0.915 42 H 0.095 0.905 43 H 0.096 0.904 44 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.773 17.964 36.389 40.621 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.262 0.738 3 H 0.267 0.733 4 H 0.266 0.734 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.178 4.178 8 C -0.178 4.178 9 C 0.044 3.956 10 H 0.109 0.891 11 N -0.346 5.346 12 C 0.201 3.799 13 C -0.332 4.332 14 C 0.025 3.975 15 N -0.259 5.259 16 C 0.177 3.823 17 C -0.280 4.280 18 C -0.102 4.102 19 C -0.145 4.145 20 C -0.328 4.328 21 C -0.148 4.148 22 O -0.327 6.327 23 Si 0.546 3.454 24 S 0.447 5.553 25 N -0.295 5.295 26 C -0.166 4.166 27 C -0.176 4.176 28 H 0.113 0.887 29 H 0.110 0.890 30 H 0.110 0.890 31 H 0.101 0.899 32 H 0.248 0.752 33 H 0.158 0.842 34 H 0.189 0.811 35 H 0.172 0.828 36 H 0.168 0.832 37 H 0.148 0.852 38 H 0.226 0.774 39 H -0.155 1.155 40 H -0.164 1.164 41 H 0.104 0.896 42 H 0.114 0.886 43 H 0.115 0.885 44 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -0.282 16.611 36.366 39.981 hybrid contribution 2.191 0.227 0.197 2.211 sum 1.908 16.838 36.564 40.300 Atomic orbital electron populations 1.42642 1.21313 1.20788 1.18652 0.73759 0.73337 0.73367 1.23584 1.04602 0.95695 0.84155 0.83790 1.22058 1.03135 1.00385 0.92217 1.22075 1.02887 0.95579 0.97227 1.21046 0.99882 0.90722 0.83924 0.89096 1.44305 1.29626 1.54973 1.05709 1.18290 0.87752 0.87842 0.86063 1.22122 0.99816 1.09657 1.01630 1.22998 0.96892 0.90859 0.86759 1.68489 1.13186 1.11578 1.32633 1.19824 0.85939 0.88446 0.88103 1.22145 1.02555 1.08483 0.94807 1.20493 1.00941 0.98392 0.90362 1.20087 0.95032 0.97822 1.01600 1.25357 1.02570 1.06538 0.98297 1.24433 0.99960 0.87241 1.03155 1.86658 1.73897 1.35894 1.36272 0.95301 0.79935 0.89988 0.80198 1.84305 1.22226 1.44175 1.04562 1.67894 1.35714 1.26888 0.99022 1.21740 1.02773 1.00884 0.91167 1.22010 1.03267 0.90784 1.01500 0.88713 0.89033 0.89049 0.89865 0.75154 0.84248 0.81114 0.82772 0.83203 0.85180 0.77396 1.15532 1.16358 0.89640 0.88604 0.88504 0.88906 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.70 4.15 -4.66 -0.02 24.68 16 2 H 0.43 -17.28 8.90 -39.29 -0.35 -17.63 16 3 H 0.44 -17.58 8.96 -39.29 -0.35 -17.93 16 4 H 0.44 -17.61 8.96 -39.29 -0.35 -17.96 16 5 C 0.02 -0.77 3.03 -67.71 -0.20 -0.98 16 6 H 0.14 -4.74 8.14 -51.93 -0.42 -5.16 16 7 C -0.14 4.05 5.43 -26.73 -0.15 3.90 16 8 C -0.14 3.20 5.46 -26.73 -0.15 3.06 16 9 C 0.15 -3.22 2.15 -67.93 -0.15 -3.37 16 10 H 0.09 -1.95 6.51 -51.93 -0.34 -2.29 16 11 N -0.71 11.39 5.23 -53.79 -0.28 11.11 16 12 C 0.44 -5.06 7.68 -154.88 -1.19 -6.25 16 13 C -0.30 3.88 8.93 -39.02 -0.35 3.53 16 14 C 0.19 -1.92 11.28 -17.32 -0.20 -2.11 16 15 N -0.54 3.47 9.96 -11.35 -0.11 3.35 16 16 C 0.44 -2.56 7.58 -156.86 -1.19 -3.75 16 17 C -0.16 0.88 6.42 -36.95 -0.24 0.64 16 18 C -0.07 0.39 9.81 -40.93 -0.40 -0.01 16 19 C -0.11 0.70 10.03 -41.33 -0.41 0.29 16 20 C -0.21 1.33 5.71 -35.87 -0.20 1.13 16 21 C -0.04 0.24 2.96 36.01 0.11 0.34 16 22 O -0.52 2.64 12.88 -35.23 -0.45 2.19 16 23 Si 0.65 -4.59 30.97 -169.99 -5.26 -9.85 16 24 S 0.18 -1.18 20.30 -107.50 -2.18 -3.36 16 25 N -0.57 4.28 10.16 -10.50 -0.11 4.17 16 26 C -0.13 3.05 5.39 -26.76 -0.14 2.91 16 27 C -0.14 4.03 5.43 -26.76 -0.15 3.88 16 28 H 0.09 -2.78 8.14 -51.93 -0.42 -3.20 16 29 H 0.09 -2.70 8.14 -51.93 -0.42 -3.12 16 30 H 0.09 -1.84 7.75 -51.93 -0.40 -2.24 16 31 H 0.08 -1.86 8.14 -51.93 -0.42 -2.28 16 32 H 0.41 -6.47 8.73 -40.82 -0.36 -6.83 16 33 H 0.14 -2.35 6.28 -52.49 -0.33 -2.68 16 34 H 0.17 -2.25 8.06 -52.49 -0.42 -2.67 16 35 H 0.15 -1.00 7.95 -52.49 -0.42 -1.41 16 36 H 0.15 -1.03 8.06 -52.48 -0.42 -1.46 16 37 H 0.13 -0.98 7.96 -51.93 -0.41 -1.40 16 38 H 0.38 -2.99 8.70 45.56 0.40 -2.60 16 39 H -0.23 0.94 7.11 56.52 0.40 1.34 16 40 H -0.24 1.33 7.11 56.52 0.40 1.74 16 41 H 0.08 -2.02 8.14 -51.93 -0.42 -2.45 16 42 H 0.10 -2.06 8.14 -51.93 -0.42 -2.49 16 43 H 0.10 -2.89 8.14 -51.93 -0.42 -3.31 16 44 H 0.09 -2.74 8.14 -51.93 -0.42 -3.17 16 LS Contribution 367.11 15.07 5.53 5.53 Total: 1.00 -43.94 367.11 -14.23 -58.18 By element: Atomic # 1 Polarization: -92.86 SS G_CDS: -6.34 Total: -99.20 kcal Atomic # 6 Polarization: 8.21 SS G_CDS: -5.01 Total: 3.21 kcal Atomic # 7 Polarization: 43.83 SS G_CDS: -0.52 Total: 43.31 kcal Atomic # 8 Polarization: 2.64 SS G_CDS: -0.45 Total: 2.19 kcal Atomic # 14 Polarization: -4.59 SS G_CDS: -5.26 Total: -9.85 kcal Atomic # 16 Polarization: -1.18 SS G_CDS: -2.18 Total: -3.36 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -43.94 -14.23 -58.18 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081486_17085348.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 228.066 kcal (2) G-P(sol) polarization free energy of solvation -43.941 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 184.126 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.234 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -58.175 kcal (6) G-S(sol) free energy of system = (1) + (5) 169.891 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds