Wall clock time and date at job start Mon Mar 8 2021 06:23:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00902 * 1 3 3 H 1.00900 * 109.46225 * 1 2 4 4 H 1.00901 * 109.47319 * 240.00672 * 1 2 3 5 5 C 1.46894 * 109.47058 * 120.00288 * 1 2 3 6 6 H 1.09002 * 109.47104 * 300.00187 * 5 1 2 7 7 C 1.52997 * 109.47515 * 60.00455 * 5 1 2 8 8 C 1.53000 * 109.47060 * 180.02562 * 7 5 1 9 9 C 1.53002 * 109.47233 * 299.99657 * 8 7 5 10 10 H 1.09002 * 109.47075 * 300.00932 * 9 8 7 11 11 N 1.46492 * 109.47204 * 180.02562 * 9 8 7 12 12 C 1.39007 * 119.99860 * 155.00137 * 11 9 8 13 13 C 1.39298 * 120.01176 * 359.72600 * 12 11 9 14 14 N 1.32078 * 120.17796 * 179.70371 * 13 12 11 15 15 C 1.31997 * 120.21691 * 0.57329 * 14 13 12 16 16 C 1.39636 * 120.02247 * 359.70405 * 15 14 13 17 17 C 1.47650 * 120.09148 * 179.97438 * 16 15 14 18 18 C 1.34900 * 125.27415 * 5.01681 * 17 16 15 19 19 C 1.37831 * 114.71403 * 179.97438 * 18 17 16 20 20 C 1.33717 * 115.07180 * 0.02562 * 19 18 17 21 21 C 1.50702 * 125.12099 * 179.97438 * 20 19 18 22 22 O 1.42899 * 109.47099 * 64.99608 * 21 20 19 23 23 Si 1.86300 * 109.47053 * 184.99775 * 21 20 19 24 24 S 1.75862 * 109.75584 * 359.76579 * 20 19 18 25 25 N 1.32582 * 120.01071 * 180.02562 * 12 11 9 26 26 C 1.52997 * 109.46817 * 60.00194 * 9 8 7 27 27 C 1.52999 * 109.46927 * 180.02562 * 5 1 2 28 28 H 1.09002 * 109.47153 * 59.99762 * 7 5 1 29 29 H 1.09001 * 109.46832 * 299.99953 * 7 5 1 30 30 H 1.08992 * 109.47399 * 59.99823 * 8 7 5 31 31 H 1.09004 * 109.46724 * 180.02562 * 8 7 5 32 32 H 0.96998 * 120.00353 * 335.00390 * 11 9 8 33 33 H 1.08003 * 119.91322 * 359.97438 * 13 12 11 34 34 H 1.08009 * 119.99300 * 179.68613 * 15 14 13 35 35 H 1.08006 * 122.64280 * 359.97438 * 18 17 16 36 36 H 1.07996 * 122.46808 * 180.02562 * 19 18 17 37 37 H 1.09002 * 109.46471 * 304.99870 * 21 20 19 38 38 H 0.96701 * 114.00062 * 180.02562 * 22 21 20 39 39 H 1.48502 * 109.99841 * 299.99806 * 23 21 20 40 40 H 1.48497 * 110.00053 * 61.31671 * 23 21 20 41 41 H 1.09002 * 109.47153 * 60.00231 * 26 9 8 42 42 H 1.09001 * 109.47289 * 180.02562 * 26 9 8 43 43 H 1.09000 * 109.47486 * 59.99528 * 27 5 1 44 44 H 1.09002 * 109.46716 * 299.99610 * 27 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3362 0.9514 0.0000 4 1 -0.3364 -0.4755 0.8239 5 6 -0.4896 -0.6925 -1.1994 6 1 -0.1263 -0.1787 -2.0894 7 6 0.0202 -2.1350 -1.1993 8 6 -0.4893 -2.8561 -2.4489 9 6 -2.0193 -2.8560 -2.4495 10 1 -2.3830 -3.3698 -1.5597 11 7 -2.5071 -3.5469 -3.6456 12 6 -3.7675 -4.1332 -3.6441 13 6 -4.5645 -4.0689 -2.5035 14 7 -5.7649 -4.6197 -2.5004 15 6 -6.2121 -5.2442 -3.5739 16 6 -5.4182 -5.3189 -4.7202 17 6 -5.9166 -6.0176 -5.9216 18 6 -7.1535 -6.5368 -6.0640 19 6 -7.3877 -7.1429 -7.2795 20 6 -6.3560 -7.1245 -8.1300 21 6 -6.3631 -7.7194 -9.5146 22 8 -7.2980 -7.0124 -10.3320 23 14 -4.6603 -7.5824 -10.2580 24 16 -4.9917 -6.2962 -7.3915 25 7 -4.2091 -4.7590 -4.7264 26 6 -2.5292 -1.4135 -2.4496 27 6 -2.0196 -0.6920 -1.1996 28 1 -0.3431 -2.6488 -0.3093 29 1 1.1102 -2.1351 -1.1993 30 1 -0.1256 -2.3422 -3.3386 31 1 -0.1264 -3.8839 -2.4486 32 1 -1.9507 -3.5953 -4.4387 33 1 -4.2017 -3.5634 -1.6207 34 1 -7.1923 -5.6978 -3.5657 35 1 -7.9014 -6.4818 -5.2866 36 1 -8.3348 -7.5991 -7.5269 37 1 -6.6513 -8.7690 -9.4574 38 1 -7.3557 -7.3425 -11.2391 39 1 -4.2557 -6.1560 -10.3412 40 1 -3.6841 -8.3400 -9.4344 41 1 -2.1654 -0.8996 -3.3394 42 1 -3.6192 -1.4134 -2.4496 43 1 -2.3826 0.3358 -1.1998 44 1 -2.3832 -1.2056 -0.3096 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081486_17085452.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:23:56 Heat of formation + Delta-G solvation = 170.810640 kcal Electronic energy + Delta-G solvation = -25643.474023 eV Core-core repulsion = 22000.835805 eV Total energy + Delta-G solvation = -3642.638219 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.133 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -43.65613 -42.87074 -40.29014 -39.78174 -38.13673 -37.09331 -35.95000 -34.12199 -33.55078 -31.52441 -30.41053 -28.28592 -26.40022 -26.07226 -25.64751 -24.94137 -24.07598 -23.43485 -21.50491 -21.29149 -21.10086 -20.11419 -19.89591 -19.41797 -19.07559 -18.60310 -18.42233 -17.90593 -17.53607 -17.39879 -17.09146 -16.83356 -16.37239 -16.21144 -15.86996 -15.61740 -15.44678 -15.10828 -15.07625 -14.81736 -14.66897 -14.58688 -14.38304 -14.30035 -13.90278 -13.78800 -13.43769 -13.38716 -13.28215 -13.18854 -12.75401 -12.45395 -12.38623 -11.03672 -11.00339 -10.48535 -10.14618 -9.74005 -5.80893 -1.60916 -1.28210 -0.64727 -0.32052 -0.19110 0.19526 0.54487 0.59108 0.59624 0.65428 0.76975 0.95279 1.07691 1.30172 1.39440 1.49612 1.57927 1.84873 1.88609 1.99541 2.09138 2.13560 2.21524 2.27464 2.35508 2.48180 2.55498 2.63466 2.69802 2.73424 2.76145 3.04973 3.13655 3.17535 3.21477 3.25149 3.33366 3.38510 3.50081 3.70601 3.78477 3.83541 4.19535 4.40680 4.50057 4.60621 4.73342 5.17853 5.55019 5.97596 5.97978 Molecular weight = 334.13amu Principal moments of inertia in cm(-1) A = 0.021629 B = 0.002522 C = 0.002331 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1294.275757 B =11098.946496 C =12010.243942 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.438 0.562 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.137 4.137 8 C -0.126 4.126 9 C 0.150 3.850 10 H 0.091 0.909 11 N -0.716 5.716 12 C 0.365 3.635 13 C -0.019 4.019 14 N -0.392 5.392 15 C 0.011 3.989 16 C 0.214 3.786 17 C -0.159 4.159 18 C -0.094 4.094 19 C -0.106 4.106 20 C -0.167 4.167 21 C -0.038 4.038 22 O -0.542 6.542 23 Si 0.670 3.330 24 S 0.156 5.844 25 N -0.501 5.501 26 C -0.139 4.139 27 C -0.140 4.140 28 H 0.093 0.907 29 H 0.096 0.904 30 H 0.085 0.915 31 H 0.096 0.904 32 H 0.410 0.590 33 H 0.161 0.839 34 H 0.174 0.826 35 H 0.152 0.848 36 H 0.152 0.848 37 H 0.088 0.912 38 H 0.387 0.613 39 H -0.235 1.235 40 H -0.240 1.240 41 H 0.083 0.917 42 H 0.090 0.910 43 H 0.095 0.905 44 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 19.977 19.321 20.465 34.514 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.267 0.733 4 H 0.263 0.737 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.176 4.176 8 C -0.165 4.165 9 C 0.044 3.956 10 H 0.109 0.891 11 N -0.350 5.350 12 C 0.125 3.875 13 C -0.186 4.186 14 N -0.104 5.104 15 C -0.152 4.152 16 C 0.073 3.927 17 C -0.278 4.278 18 C -0.127 4.127 19 C -0.136 4.136 20 C -0.286 4.286 21 C -0.151 4.151 22 O -0.349 6.349 23 Si 0.570 3.430 24 S 0.423 5.577 25 N -0.223 5.223 26 C -0.179 4.179 27 C -0.178 4.178 28 H 0.112 0.888 29 H 0.115 0.885 30 H 0.103 0.897 31 H 0.114 0.886 32 H 0.247 0.753 33 H 0.179 0.821 34 H 0.191 0.809 35 H 0.170 0.830 36 H 0.170 0.830 37 H 0.106 0.894 38 H 0.235 0.765 39 H -0.159 1.159 40 H -0.163 1.163 41 H 0.102 0.898 42 H 0.109 0.891 43 H 0.113 0.887 44 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 22.179 20.228 20.583 36.397 hybrid contribution -1.430 -0.193 0.730 1.617 sum 20.749 20.034 21.313 35.863 Atomic orbital electron populations 1.42639 1.21234 1.20735 1.18776 0.73387 0.73343 0.73733 1.23580 0.99613 0.97462 0.87378 0.83819 1.22022 1.02920 0.90818 1.01809 1.21739 0.94139 1.03211 0.97389 1.21050 0.93590 0.91944 0.89010 0.89125 1.44291 1.14748 1.59398 1.16592 1.19149 0.87334 0.90516 0.90485 1.23050 0.92161 1.05438 0.97959 1.68237 1.11940 1.03511 1.26692 1.23432 1.01927 1.01208 0.88619 1.19514 0.88936 0.92020 0.92207 1.22592 0.98627 1.09032 0.97522 1.20394 0.95469 0.98231 0.98622 1.20015 0.99961 1.01361 0.92306 1.23992 0.98410 1.06548 0.99613 1.24003 1.05054 0.97076 0.88930 1.86504 1.62386 1.59832 1.26202 0.94629 0.74969 0.83706 0.89743 1.84433 1.14773 1.52252 1.06199 1.67919 1.14816 1.12638 1.26961 1.22105 1.03434 0.95417 0.96927 1.22073 0.89407 1.04266 1.02093 0.88838 0.88508 0.89672 0.88588 0.75306 0.82150 0.80911 0.83049 0.83018 0.89440 0.76454 1.15881 1.16347 0.89839 0.89099 0.88694 0.88934 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.36 4.15 -4.67 -0.02 24.34 16 2 H 0.44 -17.40 8.96 -39.29 -0.35 -17.75 16 3 H 0.44 -17.35 8.96 -39.29 -0.35 -17.70 16 4 H 0.43 -17.06 8.90 -39.29 -0.35 -17.41 16 5 C 0.02 -0.76 3.02 -67.72 -0.20 -0.97 16 6 H 0.14 -4.65 8.14 -51.93 -0.42 -5.07 16 7 C -0.14 3.96 5.43 -26.73 -0.15 3.81 16 8 C -0.13 2.95 5.39 -26.73 -0.14 2.81 16 9 C 0.15 -3.11 2.14 -67.94 -0.15 -3.25 16 10 H 0.09 -1.89 6.45 -51.93 -0.33 -2.22 16 11 N -0.72 10.86 5.25 -53.85 -0.28 10.58 16 12 C 0.36 -3.80 7.64 -154.80 -1.18 -4.99 16 13 C -0.02 0.20 10.02 -17.05 -0.17 0.03 16 14 N -0.39 2.97 10.47 -12.54 -0.13 2.84 16 15 C 0.01 -0.08 10.71 -16.96 -0.18 -0.26 16 16 C 0.21 -1.31 6.75 -82.89 -0.56 -1.86 16 17 C -0.16 0.86 6.41 -36.93 -0.24 0.62 16 18 C -0.09 0.61 9.64 -40.91 -0.39 0.22 16 19 C -0.11 0.60 10.03 -41.32 -0.41 0.19 16 20 C -0.17 0.81 5.74 -35.89 -0.21 0.60 16 21 C -0.04 0.25 2.95 36.01 0.11 0.36 16 22 O -0.54 3.46 12.86 -35.23 -0.45 3.01 16 23 Si 0.67 -4.95 30.97 -169.99 -5.26 -10.22 16 24 S 0.16 -0.69 20.35 -107.50 -2.19 -2.88 16 25 N -0.50 3.41 10.30 -8.87 -0.09 3.32 16 26 C -0.14 3.12 5.44 -26.70 -0.15 2.97 16 27 C -0.14 3.96 5.44 -26.70 -0.15 3.82 16 28 H 0.09 -2.72 8.14 -51.93 -0.42 -3.14 16 29 H 0.10 -2.84 8.14 -51.93 -0.42 -3.27 16 30 H 0.08 -1.97 8.14 -51.93 -0.42 -2.39 16 31 H 0.10 -2.02 8.14 -51.93 -0.42 -2.44 16 32 H 0.41 -6.09 8.73 -40.82 -0.36 -6.45 16 33 H 0.16 -2.40 6.10 -52.48 -0.32 -2.72 16 34 H 0.17 -1.60 6.77 -52.48 -0.36 -1.95 16 35 H 0.15 -1.41 6.91 -52.48 -0.36 -1.77 16 36 H 0.15 -1.07 8.06 -52.49 -0.42 -1.49 16 37 H 0.09 -0.75 7.96 -51.93 -0.41 -1.17 16 38 H 0.39 -4.36 8.74 45.56 0.40 -3.96 16 39 H -0.24 1.06 7.11 56.52 0.40 1.47 16 40 H -0.24 1.25 7.11 56.52 0.40 1.65 16 41 H 0.08 -1.80 8.14 -51.93 -0.42 -2.22 16 42 H 0.09 -1.75 7.71 -51.93 -0.40 -2.15 16 43 H 0.09 -2.72 8.14 -51.93 -0.42 -3.14 16 44 H 0.09 -2.66 8.14 -51.93 -0.42 -3.08 16 LS Contribution 364.72 15.07 5.50 5.50 Total: 1.00 -44.47 364.72 -13.31 -57.78 By element: Atomic # 1 Polarization: -92.16 SS G_CDS: -6.20 Total: -98.36 kcal Atomic # 6 Polarization: 8.27 SS G_CDS: -4.17 Total: 4.10 kcal Atomic # 7 Polarization: 41.60 SS G_CDS: -0.52 Total: 41.08 kcal Atomic # 8 Polarization: 3.46 SS G_CDS: -0.45 Total: 3.01 kcal Atomic # 14 Polarization: -4.95 SS G_CDS: -5.26 Total: -10.22 kcal Atomic # 16 Polarization: -0.69 SS G_CDS: -2.19 Total: -2.88 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -44.47 -13.31 -57.78 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081486_17085452.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 228.587 kcal (2) G-P(sol) polarization free energy of solvation -44.470 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 184.116 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.306 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -57.776 kcal (6) G-S(sol) free energy of system = (1) + (5) 170.811 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds