Wall clock time and date at job start Mon Mar 8 2021 06:54:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00901 * 1 3 3 H 1.00895 * 109.47354 * 1 2 4 4 H 1.00901 * 109.46900 * 239.99130 * 1 2 3 5 5 C 1.46904 * 109.46631 * 119.99892 * 1 2 3 6 6 H 1.09009 * 109.46998 * 299.99696 * 5 1 2 7 7 C 1.52997 * 109.47584 * 59.99284 * 5 1 2 8 8 C 1.52996 * 109.47349 * 179.97438 * 7 5 1 9 9 C 1.52999 * 109.47176 * 300.00517 * 8 7 5 10 10 H 1.09005 * 109.47351 * 299.99503 * 9 8 7 11 11 N 1.46503 * 109.47268 * 179.97438 * 9 8 7 12 12 C 1.34778 * 120.00048 * 154.99740 * 11 9 8 13 13 O 1.21557 * 119.99901 * 0.02562 * 12 11 9 14 14 C 1.47846 * 119.99493 * 179.97438 * 12 11 9 15 15 C 1.40055 * 120.04009 * 179.97438 * 14 12 11 16 16 C 1.38287 * 118.04739 * 180.02562 * 15 14 12 17 17 C 1.40086 * 117.99706 * 0.02562 * 16 15 14 18 18 C 1.47396 * 120.09633 * 180.02562 * 17 16 15 19 19 C 1.35081 * 125.27858 * 179.97438 * 18 17 16 20 20 C 1.37687 * 114.70413 * 179.97438 * 19 18 17 21 21 C 1.33824 * 115.08842 * 359.97438 * 20 19 18 22 22 C 1.50707 * 125.11745 * 179.97438 * 21 20 19 23 23 O 1.42900 * 109.47348 * 300.00689 * 22 21 20 24 24 Si 1.86292 * 109.47060 * 180.02562 * 22 21 20 25 25 S 1.75851 * 109.76063 * 359.76351 * 21 20 19 26 26 N 1.33328 * 119.80810 * 0.27275 * 17 16 15 27 27 N 1.28365 * 122.07797 * 359.42080 * 26 17 16 28 28 C 1.53003 * 109.47582 * 59.99988 * 9 8 7 29 29 C 1.52999 * 109.46999 * 179.97438 * 5 1 2 30 30 H 1.09009 * 109.46617 * 60.00179 * 7 5 1 31 31 H 1.08996 * 109.47172 * 300.00642 * 7 5 1 32 32 H 1.09002 * 109.47460 * 180.02562 * 8 7 5 33 33 H 1.09001 * 109.47240 * 60.00197 * 8 7 5 34 34 H 0.97000 * 119.99492 * 334.99455 * 11 9 8 35 35 H 1.08004 * 120.97567 * 0.05433 * 15 14 12 36 36 H 1.07999 * 121.00479 * 180.02562 * 16 15 14 37 37 H 1.08000 * 122.64696 * 0.02562 * 19 18 17 38 38 H 1.07999 * 122.45245 * 179.97438 * 20 19 18 39 39 H 1.08998 * 109.46969 * 60.00503 * 22 21 20 40 40 H 0.96699 * 113.99950 * 300.00142 * 23 22 21 41 41 H 1.48506 * 109.99895 * 58.68619 * 24 22 21 42 42 H 1.48501 * 109.99956 * 179.97438 * 24 22 21 43 43 H 1.08999 * 109.46751 * 59.99276 * 28 9 8 44 44 H 1.08993 * 109.47585 * 180.02562 * 28 9 8 45 45 H 1.08992 * 109.47313 * 299.99654 * 29 5 1 46 46 H 1.08999 * 109.47131 * 59.99972 * 29 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9512 0.0000 4 1 -0.3363 -0.4758 0.8238 5 6 -0.4896 -0.6925 -1.1995 6 1 -0.1262 -0.1786 -2.0895 7 6 0.0206 -2.1349 -1.1997 8 6 -0.4898 -2.8563 -2.4487 9 6 -2.0198 -2.8564 -2.4481 10 1 -2.3829 -3.3702 -1.5580 11 7 -2.5086 -3.5466 -3.6443 12 6 -3.7305 -4.1152 -3.6423 13 8 -4.4272 -4.0550 -2.6480 14 6 -4.2239 -4.8113 -4.8497 15 6 -5.4933 -5.4030 -4.8485 16 6 -5.9132 -6.0437 -5.9998 17 6 -5.0425 -6.0620 -7.0970 18 6 -5.4433 -6.7315 -8.3475 19 6 -4.6896 -6.8118 -9.4656 20 6 -5.2787 -7.4898 -10.5092 21 6 -6.5041 -7.9650 -10.2574 22 6 -7.3521 -8.7377 -11.2347 23 8 -7.5984 -7.9344 -12.3907 24 14 -8.9731 -9.1844 -10.4326 25 16 -6.9735 -7.5571 -8.6125 26 7 -3.8482 -5.4764 -7.0052 27 7 -3.4629 -4.8775 -5.9372 28 6 -2.5300 -1.4139 -2.4480 29 6 -2.0196 -0.6931 -1.1993 30 1 -0.3428 -2.6489 -0.3097 31 1 1.1105 -2.1348 -1.1996 32 1 -0.1268 -3.8841 -2.4486 33 1 -0.1269 -2.3425 -3.3388 34 1 -1.9528 -3.5942 -4.4379 35 1 -6.1259 -5.3597 -3.9741 36 1 -6.8832 -6.5157 -6.0515 37 1 -3.7025 -6.3791 -9.5352 38 1 -4.7877 -7.6281 -11.4611 39 1 -6.8292 -9.6475 -11.5293 40 1 -8.0619 -7.1068 -12.2030 41 1 -9.6811 -7.9534 -9.9982 42 1 -9.8188 -9.9462 -11.3864 43 1 -2.1670 -0.9001 -3.3381 44 1 -3.6200 -1.4140 -2.4472 45 1 -2.3825 -1.2073 -0.3094 46 1 -2.3833 0.3344 -1.1990 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081486_17088014.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:54:09 Heat of formation + Delta-G solvation = 136.395240 kcal Electronic energy + Delta-G solvation = -28647.697945 eV Core-core repulsion = 24556.659030 eV Total energy + Delta-G solvation = -4091.038915 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.133 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -43.58580 -43.07586 -41.59874 -40.05395 -39.27714 -38.26151 -36.20674 -35.35535 -35.01624 -33.99044 -32.07782 -31.11503 -28.57653 -27.11363 -26.22213 -26.08356 -25.29208 -24.47874 -23.54781 -23.11469 -21.56130 -21.39363 -21.20338 -20.29093 -19.87770 -19.80292 -19.44931 -18.53465 -18.07420 -17.79645 -17.52409 -17.38364 -17.24160 -16.93942 -16.80259 -16.67876 -16.36630 -16.16256 -15.84029 -15.59372 -15.54358 -15.28716 -14.82510 -14.78349 -14.60923 -14.52584 -14.43173 -14.21727 -14.19702 -13.68640 -13.51989 -13.26993 -13.23124 -12.93954 -12.38976 -12.34323 -12.24960 -12.24406 -11.75683 -11.46407 -11.37275 -10.26506 -10.18542 -5.67206 -1.99035 -1.22141 -1.20766 -0.72591 -0.43077 -0.00693 0.50385 0.58710 0.62175 0.67738 0.73608 0.83904 0.94948 1.03914 1.34219 1.47341 1.57978 1.65248 1.70726 1.76503 1.96506 2.05518 2.16005 2.20479 2.35210 2.39853 2.45955 2.59375 2.64829 2.67567 2.73270 2.84434 2.86712 2.91268 2.93151 3.01883 3.15641 3.28934 3.48808 3.55538 3.61543 3.71321 3.75370 3.86933 3.95309 3.98573 4.09285 4.38364 4.47173 4.69112 5.14966 5.70385 5.86190 6.51756 Molecular weight = 362.13amu Principal moments of inertia in cm(-1) A = 0.032869 B = 0.001682 C = 0.001635 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 851.673581 B =16643.045061 C =17119.356423 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.437 0.563 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.137 4.137 8 C -0.128 4.128 9 C 0.139 3.861 10 H 0.098 0.902 11 N -0.711 5.711 12 C 0.588 3.412 13 O -0.521 6.521 14 C 0.002 3.998 15 C -0.050 4.050 16 C -0.118 4.118 17 C 0.178 3.822 18 C -0.179 4.179 19 C -0.065 4.065 20 C -0.115 4.115 21 C -0.192 4.192 22 C -0.037 4.037 23 O -0.519 6.519 24 Si 0.649 3.351 25 S 0.152 5.848 26 N -0.228 5.228 27 N -0.198 5.198 28 C -0.132 4.132 29 C -0.139 4.139 30 H 0.092 0.908 31 H 0.096 0.904 32 H 0.095 0.905 33 H 0.085 0.915 34 H 0.416 0.584 35 H 0.169 0.831 36 H 0.160 0.840 37 H 0.156 0.844 38 H 0.153 0.847 39 H 0.133 0.867 40 H 0.379 0.621 41 H -0.239 1.239 42 H -0.230 1.230 43 H 0.080 0.920 44 H 0.092 0.908 45 H 0.092 0.908 46 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 20.026 21.757 27.380 40.300 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.266 0.734 4 H 0.262 0.738 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.176 4.176 8 C -0.166 4.166 9 C 0.035 3.965 10 H 0.116 0.884 11 N -0.364 5.364 12 C 0.372 3.628 13 O -0.395 6.395 14 C -0.144 4.144 15 C -0.078 4.078 16 C -0.148 4.148 17 C 0.037 3.963 18 C -0.298 4.298 19 C -0.098 4.098 20 C -0.145 4.145 21 C -0.311 4.311 22 C -0.149 4.149 23 O -0.326 6.326 24 Si 0.547 3.453 25 S 0.417 5.583 26 N -0.074 5.074 27 N -0.046 5.046 28 C -0.172 4.172 29 C -0.177 4.177 30 H 0.111 0.889 31 H 0.115 0.885 32 H 0.114 0.886 33 H 0.104 0.896 34 H 0.254 0.746 35 H 0.186 0.814 36 H 0.178 0.822 37 H 0.173 0.827 38 H 0.171 0.829 39 H 0.151 0.849 40 H 0.227 0.773 41 H -0.163 1.163 42 H -0.153 1.153 43 H 0.099 0.901 44 H 0.110 0.890 45 H 0.110 0.890 46 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 18.975 21.375 27.752 39.839 hybrid contribution 0.314 1.058 -0.898 1.423 sum 19.289 22.434 26.854 39.956 Atomic orbital electron populations 1.42645 1.21176 1.20704 1.18835 0.73434 0.73395 0.73753 1.23592 0.99663 0.97463 0.87286 0.83814 1.22019 1.02795 0.90839 1.01924 1.21773 0.94316 1.03183 0.97370 1.21072 0.93159 0.92444 0.89865 0.88379 1.45763 1.17701 1.55766 1.17122 1.17464 0.81571 0.77861 0.85892 1.90855 1.56267 1.59288 1.33110 1.22602 0.94616 1.01491 0.95725 1.22336 0.94785 0.91390 0.99287 1.22447 1.01461 0.98619 0.92225 1.20615 0.91408 0.92257 0.92054 1.22422 1.00726 1.10135 0.96491 1.20570 1.01093 0.97363 0.90746 1.20128 0.94137 0.99315 1.00928 1.25270 1.00352 1.07045 0.98387 1.24477 1.06727 0.95731 0.87993 1.86666 1.79374 1.36164 1.30398 0.95344 0.77117 0.85456 0.87353 1.84150 1.14928 1.50759 1.08414 1.73515 1.12486 1.05896 1.15460 1.73167 1.27154 1.08845 0.95406 1.21941 1.03590 0.94966 0.96655 1.22035 0.89292 1.04086 1.02294 0.88899 0.88540 0.88597 0.89628 0.74648 0.81385 0.82211 0.82694 0.82925 0.84936 0.77288 1.16272 1.15312 0.90104 0.88958 0.88955 0.88822 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 23.98 4.15 -4.66 -0.02 23.96 16 2 H 0.44 -17.19 8.96 -39.29 -0.35 -17.54 16 3 H 0.44 -17.11 8.96 -39.29 -0.35 -17.47 16 4 H 0.43 -16.75 8.90 -39.29 -0.35 -17.10 16 5 C 0.02 -0.75 3.03 -67.71 -0.20 -0.96 16 6 H 0.14 -4.58 8.14 -51.92 -0.42 -5.00 16 7 C -0.14 3.85 5.43 -26.73 -0.15 3.71 16 8 C -0.13 2.91 5.39 -26.73 -0.14 2.76 16 9 C 0.14 -2.69 2.45 -67.93 -0.17 -2.85 16 10 H 0.10 -1.75 7.58 -51.93 -0.39 -2.14 16 11 N -0.71 10.64 5.07 -54.74 -0.28 10.36 16 12 C 0.59 -6.38 7.77 -12.33 -0.10 -6.48 16 13 O -0.52 4.47 16.04 5.32 0.09 4.55 16 14 C 0.00 -0.02 6.83 -82.79 -0.57 -0.58 16 15 C -0.05 0.48 9.71 -38.88 -0.38 0.10 16 16 C -0.12 1.09 9.71 -38.87 -0.38 0.71 16 17 C 0.18 -1.30 6.83 -82.80 -0.57 -1.86 16 18 C -0.18 1.30 6.38 -36.98 -0.24 1.06 16 19 C -0.06 0.46 9.84 -40.91 -0.40 0.06 16 20 C -0.12 0.84 10.00 -41.33 -0.41 0.43 16 21 C -0.19 1.44 5.73 -35.85 -0.21 1.24 16 22 C -0.04 0.28 2.96 36.01 0.11 0.38 16 23 O -0.52 3.04 12.86 -35.23 -0.45 2.59 16 24 Si 0.65 -4.93 30.96 -169.99 -5.26 -10.19 16 25 S 0.15 -1.25 19.51 -107.50 -2.10 -3.35 16 26 N -0.23 1.46 11.14 33.30 0.37 1.83 16 27 N -0.20 1.58 10.73 33.33 0.36 1.94 16 28 C -0.13 2.79 5.49 -26.75 -0.15 2.64 16 29 C -0.14 3.76 5.43 -26.75 -0.15 3.61 16 30 H 0.09 -2.60 8.14 -51.92 -0.42 -3.02 16 31 H 0.10 -2.79 8.14 -51.93 -0.42 -3.21 16 32 H 0.10 -1.98 8.14 -51.93 -0.42 -2.40 16 33 H 0.09 -1.95 8.14 -51.93 -0.42 -2.37 16 34 H 0.42 -6.41 7.94 -40.82 -0.32 -6.73 16 35 H 0.17 -1.88 7.71 -52.48 -0.40 -2.28 16 36 H 0.16 -1.80 7.35 -52.49 -0.39 -2.19 16 37 H 0.16 -1.22 7.99 -52.49 -0.42 -1.64 16 38 H 0.15 -1.21 8.06 -52.49 -0.42 -1.63 16 39 H 0.13 -1.10 7.96 -51.93 -0.41 -1.52 16 40 H 0.38 -3.30 8.70 45.56 0.40 -2.90 16 41 H -0.24 1.44 7.11 56.52 0.40 1.84 16 42 H -0.23 1.00 7.11 56.52 0.40 1.40 16 43 H 0.08 -1.70 8.14 -51.93 -0.42 -2.12 16 44 H 0.09 -1.59 8.14 -51.93 -0.42 -2.01 16 45 H 0.09 -2.49 8.14 -51.93 -0.42 -2.91 16 46 H 0.09 -2.59 8.14 -51.93 -0.42 -3.01 16 LS Contribution 391.04 15.07 5.89 5.89 Total: 1.00 -42.49 391.04 -11.91 -54.40 By element: Atomic # 1 Polarization: -89.54 SS G_CDS: -6.42 Total: -95.97 kcal Atomic # 6 Polarization: 8.06 SS G_CDS: -4.08 Total: 3.97 kcal Atomic # 7 Polarization: 37.67 SS G_CDS: 0.43 Total: 38.10 kcal Atomic # 8 Polarization: 7.51 SS G_CDS: -0.37 Total: 7.14 kcal Atomic # 14 Polarization: -4.93 SS G_CDS: -5.26 Total: -10.19 kcal Atomic # 16 Polarization: -1.25 SS G_CDS: -2.10 Total: -3.35 kcal Total LS contribution 5.89 Total: 5.89 kcal Total: -42.49 -11.91 -54.40 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081486_17088014.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 190.797 kcal (2) G-P(sol) polarization free energy of solvation -42.491 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 148.306 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.911 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -54.402 kcal (6) G-S(sol) free energy of system = (1) + (5) 136.395 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds