Wall clock time and date at job start Mon Mar 8 2021 07:09:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00895 * 1 3 3 H 1.00901 * 109.47639 * 1 2 4 4 H 1.00896 * 109.47232 * 239.99755 * 1 2 3 5 5 C 1.46901 * 109.46878 * 119.99855 * 1 2 3 6 6 H 1.08996 * 109.47558 * 179.97438 * 5 1 2 7 7 C 1.52998 * 109.47342 * 299.99934 * 5 1 2 8 8 C 1.53006 * 109.47378 * 179.97438 * 7 5 1 9 9 C 1.52994 * 109.47286 * 300.00286 * 8 7 5 10 10 H 1.08996 * 109.47103 * 299.99941 * 9 8 7 11 11 N 1.46496 * 109.47139 * 179.97438 * 9 8 7 12 12 C 1.34773 * 120.00102 * 84.99871 * 11 9 8 13 13 O 1.21596 * 119.99965 * 0.02562 * 12 11 9 14 14 C 1.47550 * 120.00316 * 180.02562 * 12 11 9 15 15 C 1.40196 * 120.83476 * 180.02562 * 14 12 11 16 16 N 1.31844 * 119.05032 * 179.97438 * 15 14 12 17 17 C 1.33057 * 120.86317 * 0.02562 * 16 15 14 18 18 C 1.47248 * 119.08106 * 179.97438 * 17 16 15 19 19 C 1.36325 * 125.44500 * 180.02562 * 18 17 16 20 20 C 1.37760 * 113.30332 * 179.97438 * 19 18 17 21 21 C 1.33621 * 115.06609 * 0.02562 * 20 19 18 22 22 C 1.50704 * 124.52867 * 179.97438 * 21 20 19 23 23 O 1.42900 * 109.47056 * 65.01803 * 22 21 20 24 24 Si 1.86295 * 109.47341 * 185.02200 * 22 21 20 25 25 S 1.70618 * 110.95074 * 359.97438 * 21 20 19 26 26 N 1.33049 * 121.83698 * 0.25074 * 17 16 15 27 27 C 1.31843 * 120.86565 * 359.48281 * 26 17 16 28 28 C 1.52998 * 109.47146 * 59.99572 * 9 8 7 29 29 C 1.52997 * 109.47724 * 300.00108 * 28 9 8 30 30 H 1.08999 * 109.47449 * 300.00035 * 7 5 1 31 31 H 1.09006 * 109.46903 * 60.00066 * 7 5 1 32 32 H 1.08997 * 109.47070 * 179.97438 * 8 7 5 33 33 H 1.09006 * 109.46511 * 60.00486 * 8 7 5 34 34 H 0.97002 * 120.00047 * 264.99942 * 11 9 8 35 35 H 1.08007 * 120.47784 * 359.97438 * 15 14 12 36 36 H 1.08002 * 123.35082 * 0.03614 * 19 18 17 37 37 H 1.07998 * 122.47105 * 180.02562 * 20 19 18 38 38 H 1.09005 * 109.46746 * 305.02091 * 22 21 20 39 39 H 0.96701 * 113.99876 * 180.02562 * 23 22 21 40 40 H 1.48498 * 110.00189 * 178.67702 * 24 22 21 41 41 H 1.48502 * 110.00086 * 300.00185 * 24 22 21 42 42 H 1.08004 * 120.47600 * 180.26196 * 27 26 17 43 43 H 1.09008 * 109.47201 * 60.00361 * 28 9 8 44 44 H 1.08999 * 109.47449 * 179.97438 * 28 9 8 45 45 H 1.08993 * 109.47492 * 179.97438 * 29 28 9 46 46 H 1.09001 * 109.46652 * 300.00212 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9513 0.0000 4 1 -0.3363 -0.4757 0.8238 5 6 -0.4896 -0.6925 -1.1995 6 1 -1.5796 -0.6929 -1.1994 7 6 0.0204 0.0288 -2.4487 8 6 -0.4891 -0.6928 -3.6980 9 6 0.0214 -2.1351 -3.6977 10 1 1.1114 -2.1347 -3.6975 11 7 -0.4669 -2.8262 -4.8936 12 6 0.2097 -2.7235 -6.0547 13 8 1.2256 -2.0576 -6.1095 14 6 -0.2824 -3.4190 -7.2593 15 6 0.4079 -3.3246 -8.4760 16 7 -0.0630 -3.9610 -9.5302 17 6 -1.1769 -4.6843 -9.4497 18 6 -1.6680 -5.3785 -10.6518 19 6 -2.7898 -6.1504 -10.7162 20 6 -3.0154 -6.6807 -11.9675 21 6 -2.1087 -6.3535 -12.8929 22 6 -2.1473 -6.8146 -14.3271 23 8 -3.2977 -6.2657 -14.9732 24 14 -0.6083 -6.2402 -15.2057 25 16 -0.9014 -5.3440 -12.2339 26 7 -1.8624 -4.7934 -8.3146 27 6 -1.4521 -4.1907 -7.2161 28 6 -0.4886 -2.8564 -2.4485 29 6 0.0208 -2.1349 -1.1992 30 1 -0.3430 1.0564 -2.4488 31 1 1.1104 0.0288 -2.4487 32 1 -0.1261 -0.1787 -4.5879 33 1 -1.5791 -0.6931 -3.6982 34 1 -1.2771 -3.3577 -4.8498 35 1 1.3124 -2.7390 -8.5486 36 1 -3.4379 -6.3277 -9.8706 37 1 -3.8627 -7.3142 -12.1846 38 1 -2.1982 -7.9031 -14.3575 39 1 -3.3870 -6.5216 -15.9014 40 1 -0.6190 -6.7157 -16.6125 41 1 -0.5270 -4.7578 -15.1712 42 1 -2.0112 -4.2869 -6.2970 43 1 -1.5786 -2.8568 -2.4487 44 1 -0.1253 -3.8840 -2.4485 45 1 -0.3429 -2.6485 -0.3093 46 1 1.1109 -2.1345 -1.1990 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081486_17119452.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:09:44 Heat of formation + Delta-G solvation = 131.115401 kcal Electronic energy + Delta-G solvation = -28658.204683 eV Core-core repulsion = 24566.936817 eV Total energy + Delta-G solvation = -4091.267866 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.133 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -43.62805 -43.07174 -41.59722 -39.88836 -39.27633 -38.13510 -36.38059 -35.61276 -34.77439 -34.03336 -32.21184 -31.11641 -28.61130 -26.66743 -26.24225 -26.02929 -25.29052 -24.48159 -23.55117 -23.03607 -21.47463 -21.32073 -21.23527 -20.18334 -20.03455 -19.86747 -19.16973 -19.08354 -18.38773 -17.84758 -17.71140 -17.32639 -17.18803 -16.90416 -16.70559 -16.45409 -16.33443 -16.13304 -15.65754 -15.54530 -15.38214 -15.33046 -14.86490 -14.73207 -14.60328 -14.56554 -14.35798 -14.25051 -13.93115 -13.66936 -13.56118 -13.31492 -13.24445 -12.90506 -12.86924 -12.20703 -12.09327 -11.94164 -11.52283 -11.21965 -11.11812 -10.13900 -10.00891 -5.59943 -1.94115 -1.23971 -0.86035 -0.61381 -0.24179 0.27642 0.59942 0.62749 0.64660 0.70189 0.70956 0.80910 1.03508 1.12162 1.38320 1.44030 1.54634 1.62595 1.79026 1.90593 1.93860 2.01435 2.14665 2.16469 2.29729 2.35250 2.38694 2.46733 2.61345 2.68358 2.68972 2.79914 2.84769 2.91527 3.09121 3.13576 3.20511 3.22997 3.47462 3.57309 3.61220 3.76255 3.83248 3.98780 4.00443 4.21165 4.48589 4.59662 4.80382 4.92390 5.08556 5.82928 5.89298 6.02724 Molecular weight = 362.13amu Principal moments of inertia in cm(-1) A = 0.033504 B = 0.001686 C = 0.001640 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 835.531099 B =16607.930200 C =17067.923224 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.434 0.566 3 H 0.438 0.562 4 H 0.437 0.563 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.139 4.139 8 C -0.132 4.132 9 C 0.142 3.858 10 H 0.099 0.901 11 N -0.727 5.727 12 C 0.581 3.419 13 O -0.523 6.523 14 C -0.272 4.272 15 C 0.228 3.772 16 N -0.518 5.518 17 C 0.432 3.568 18 C -0.201 4.201 19 C -0.053 4.053 20 C -0.125 4.125 21 C -0.193 4.193 22 C -0.037 4.037 23 O -0.531 6.531 24 Si 0.638 3.362 25 S 0.269 5.731 26 N -0.510 5.510 27 C 0.198 3.802 28 C -0.128 4.128 29 C -0.138 4.138 30 H 0.093 0.907 31 H 0.092 0.908 32 H 0.092 0.908 33 H 0.079 0.921 34 H 0.403 0.597 35 H 0.187 0.813 36 H 0.157 0.843 37 H 0.148 0.852 38 H 0.090 0.910 39 H 0.385 0.615 40 H -0.233 1.233 41 H -0.232 1.232 42 H 0.172 0.828 43 H 0.083 0.917 44 H 0.095 0.905 45 H 0.096 0.904 46 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.655 14.066 38.991 41.535 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.263 0.737 3 H 0.266 0.734 4 H 0.266 0.734 5 C -0.080 4.080 6 H 0.161 0.839 7 C -0.178 4.178 8 C -0.171 4.171 9 C 0.037 3.963 10 H 0.117 0.883 11 N -0.380 5.380 12 C 0.368 3.632 13 O -0.399 6.399 14 C -0.281 4.281 15 C 0.060 3.940 16 N -0.231 5.231 17 C 0.171 3.829 18 C -0.320 4.320 19 C -0.089 4.089 20 C -0.156 4.156 21 C -0.313 4.313 22 C -0.149 4.149 23 O -0.339 6.339 24 Si 0.536 3.464 25 S 0.538 5.462 26 N -0.224 5.224 27 C 0.029 3.971 28 C -0.166 4.166 29 C -0.176 4.176 30 H 0.112 0.888 31 H 0.111 0.889 32 H 0.111 0.889 33 H 0.098 0.902 34 H 0.239 0.761 35 H 0.203 0.797 36 H 0.174 0.826 37 H 0.166 0.834 38 H 0.108 0.892 39 H 0.234 0.766 40 H -0.156 1.156 41 H -0.155 1.155 42 H 0.189 0.811 43 H 0.102 0.898 44 H 0.113 0.887 45 H 0.114 0.886 46 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 4.533 15.382 37.178 40.488 hybrid contribution -2.436 -0.478 1.014 2.682 sum 2.097 14.904 38.192 41.050 Atomic orbital electron populations 1.42643 1.21362 1.20758 1.18622 0.73722 0.73369 0.73439 1.23584 1.04455 0.95738 0.84196 0.83870 1.22050 1.03346 1.00253 0.92123 1.21944 1.02116 0.95568 0.97489 1.21022 1.00869 0.90692 0.83749 0.88340 1.45806 1.29773 1.53054 1.09336 1.17704 0.83107 0.80023 0.82362 1.90851 1.24048 1.40401 1.84638 1.21599 1.01673 1.07401 0.97401 1.23526 0.96314 0.88870 0.85281 1.68679 1.13132 1.09708 1.31581 1.20425 0.85476 0.87309 0.89729 1.22585 1.03421 1.09914 0.96066 1.20817 0.95259 0.94342 0.98442 1.19970 1.00920 1.03244 0.91509 1.23604 1.02635 1.05595 0.99499 1.24063 0.98341 1.00930 0.91523 1.86593 1.43168 1.75187 1.28994 0.95345 0.82068 0.83797 0.85225 1.83341 1.22818 1.42039 0.97963 1.68470 1.32623 1.22343 0.98958 1.23360 0.90368 0.86838 0.96548 1.21778 1.02494 1.00882 0.91493 1.22018 1.03384 0.90792 1.01426 0.88818 0.88934 0.88902 0.90242 0.76087 0.79652 0.82580 0.83413 0.89199 0.76566 1.15552 1.15521 0.81137 0.89789 0.88658 0.88569 0.88861 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.24 4.15 -4.67 -0.02 24.22 16 2 H 0.43 -16.89 8.90 -39.29 -0.35 -17.24 16 3 H 0.44 -17.27 8.96 -39.29 -0.35 -17.62 16 4 H 0.44 -17.36 8.96 -39.29 -0.35 -17.72 16 5 C 0.02 -0.78 3.03 -67.71 -0.20 -0.98 16 6 H 0.14 -4.65 8.14 -51.93 -0.42 -5.08 16 7 C -0.14 3.84 5.43 -26.73 -0.15 3.70 16 8 C -0.13 2.89 5.49 -26.73 -0.15 2.74 16 9 C 0.14 -2.89 2.45 -67.94 -0.17 -3.06 16 10 H 0.10 -1.82 7.58 -51.93 -0.39 -2.22 16 11 N -0.73 12.46 5.03 -54.85 -0.28 12.18 16 12 C 0.58 -7.12 7.74 -12.46 -0.10 -7.22 16 13 O -0.52 4.67 16.09 5.28 0.09 4.75 16 14 C -0.27 2.88 5.91 -104.63 -0.62 2.26 16 15 C 0.23 -1.87 10.87 -16.81 -0.18 -2.05 16 16 N -0.52 2.97 10.11 -10.96 -0.11 2.86 16 17 C 0.43 -2.37 7.57 -156.63 -1.19 -3.56 16 18 C -0.20 1.01 6.46 -36.61 -0.24 0.77 16 19 C -0.05 0.31 9.96 -40.45 -0.40 -0.09 16 20 C -0.13 0.69 10.00 -41.37 -0.41 0.27 16 21 C -0.19 1.00 5.57 -35.92 -0.20 0.80 16 22 C -0.04 0.23 2.93 36.01 0.11 0.33 16 23 O -0.53 2.62 12.86 -35.23 -0.45 2.17 16 24 Si 0.64 -4.14 30.88 -169.99 -5.25 -9.39 16 25 S 0.27 -1.43 19.89 -107.50 -2.14 -3.56 16 26 N -0.51 3.74 9.99 -10.96 -0.11 3.63 16 27 C 0.20 -2.21 10.80 -16.81 -0.18 -2.39 16 28 C -0.13 3.07 5.39 -26.73 -0.14 2.92 16 29 C -0.14 3.96 5.43 -26.73 -0.15 3.82 16 30 H 0.09 -2.63 8.14 -51.93 -0.42 -3.05 16 31 H 0.09 -2.52 8.14 -51.93 -0.42 -2.95 16 32 H 0.09 -1.65 8.14 -51.93 -0.42 -2.07 16 33 H 0.08 -1.75 8.14 -51.93 -0.42 -2.18 16 34 H 0.40 -7.74 6.72 -40.82 -0.27 -8.01 16 35 H 0.19 -1.77 7.73 -52.48 -0.41 -2.18 16 36 H 0.16 -1.13 8.00 -52.49 -0.42 -1.55 16 37 H 0.15 -0.96 8.06 -52.49 -0.42 -1.38 16 38 H 0.09 -0.73 7.96 -51.93 -0.41 -1.14 16 39 H 0.39 -3.41 8.74 45.56 0.40 -3.01 16 40 H -0.23 1.13 7.11 56.52 0.40 1.53 16 41 H -0.23 0.86 7.11 56.52 0.40 1.26 16 42 H 0.17 -2.73 6.52 -52.48 -0.34 -3.07 16 43 H 0.08 -2.04 8.14 -51.92 -0.42 -2.47 16 44 H 0.09 -2.09 8.14 -51.93 -0.42 -2.52 16 45 H 0.10 -2.84 8.14 -51.93 -0.42 -3.27 16 46 H 0.09 -2.66 8.14 -51.93 -0.42 -3.08 16 LS Contribution 389.68 15.07 5.87 5.87 Total: 1.00 -44.91 389.68 -13.10 -58.00 By element: Atomic # 1 Polarization: -92.68 SS G_CDS: -6.33 Total: -99.01 kcal Atomic # 6 Polarization: 2.63 SS G_CDS: -4.37 Total: -1.73 kcal Atomic # 7 Polarization: 43.40 SS G_CDS: -0.52 Total: 42.89 kcal Atomic # 8 Polarization: 7.29 SS G_CDS: -0.37 Total: 6.93 kcal Atomic # 14 Polarization: -4.14 SS G_CDS: -5.25 Total: -9.39 kcal Atomic # 16 Polarization: -1.43 SS G_CDS: -2.14 Total: -3.56 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -44.91 -13.10 -58.00 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081486_17119452.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 189.120 kcal (2) G-P(sol) polarization free energy of solvation -44.909 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 144.211 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.095 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -58.005 kcal (6) G-S(sol) free energy of system = (1) + (5) 131.115 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds