Wall clock time and date at job start Mon Mar 8 2021 07:13:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00898 * 1 3 3 H 1.00903 * 109.47051 * 1 2 4 4 H 1.00901 * 109.46776 * 240.00920 * 1 2 3 5 5 C 1.46898 * 109.47575 * 120.00687 * 1 2 3 6 6 H 1.09001 * 109.47062 * 179.97438 * 5 1 2 7 7 C 1.53006 * 109.47006 * 299.99671 * 5 1 2 8 8 C 1.52997 * 109.47127 * 179.97438 * 7 5 1 9 9 C 1.53000 * 109.47060 * 300.00449 * 8 7 5 10 10 H 1.09001 * 109.47194 * 299.99650 * 9 8 7 11 11 N 1.46499 * 109.46840 * 180.02562 * 9 8 7 12 12 C 1.34782 * 120.00074 * 155.00031 * 11 9 8 13 13 O 1.21588 * 119.99747 * 359.97438 * 12 11 9 14 14 C 1.47550 * 119.99710 * 180.02562 * 12 11 9 15 15 C 1.40321 * 120.42342 * 180.02562 * 14 12 11 16 16 C 1.36880 * 118.52715 * 179.97438 * 15 14 12 17 17 C 1.39834 * 119.33209 * 359.97438 * 16 15 14 18 18 C 1.47395 * 119.58837 * 180.02562 * 17 16 15 19 19 C 1.35075 * 125.27594 * 179.72533 * 18 17 16 20 20 C 1.37696 * 114.70634 * 179.79380 * 19 18 17 21 21 C 1.33822 * 115.08692 * 0.49648 * 20 19 18 22 22 C 1.50696 * 125.11851 * 179.69559 * 21 20 19 23 23 O 1.42903 * 109.47329 * 300.01513 * 22 21 20 24 24 Si 1.86309 * 109.47129 * 180.02562 * 22 21 20 25 25 S 1.75865 * 109.76017 * 359.73403 * 21 20 19 26 26 N 1.33093 * 120.81711 * 359.97438 * 17 16 15 27 27 C 1.31480 * 121.59589 * 359.75931 * 26 17 16 28 28 C 1.52996 * 109.47328 * 60.00126 * 9 8 7 29 29 C 1.52997 * 109.47123 * 59.99652 * 5 1 2 30 30 H 1.08998 * 109.46505 * 59.99663 * 7 5 1 31 31 H 1.08996 * 109.46884 * 300.00544 * 7 5 1 32 32 H 1.09002 * 109.47153 * 180.02562 * 8 7 5 33 33 H 1.09001 * 109.46832 * 60.00321 * 8 7 5 34 34 H 0.97002 * 120.00427 * 334.99530 * 11 9 8 35 35 H 1.07997 * 120.74018 * 359.94790 * 15 14 12 36 36 H 1.08001 * 120.33561 * 180.02562 * 16 15 14 37 37 H 1.07998 * 122.65030 * 359.97438 * 19 18 17 38 38 H 1.07998 * 122.45421 * 180.20190 * 20 19 18 39 39 H 1.08993 * 109.47266 * 60.02028 * 22 21 20 40 40 H 0.96699 * 113.99885 * 300.00442 * 23 22 21 41 41 H 1.48500 * 109.99742 * 58.67968 * 24 22 21 42 42 H 1.48494 * 110.00121 * 179.97438 * 24 22 21 43 43 H 1.08002 * 119.71181 * 180.26450 * 27 26 17 44 44 H 1.08992 * 109.47554 * 59.99639 * 28 9 8 45 45 H 1.09004 * 109.47108 * 179.97438 * 28 9 8 46 46 H 1.09002 * 109.47045 * 60.00157 * 29 5 1 47 47 H 1.09001 * 109.47375 * 300.00082 * 29 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3363 0.9513 0.0000 4 1 -0.3363 -0.4755 0.8239 5 6 -0.4898 -0.6926 -1.1993 6 1 -1.5798 -0.6930 -1.1990 7 6 0.0201 0.0286 -2.4487 8 6 -0.4894 -0.6931 -3.6978 9 6 0.0210 -2.1355 -3.6973 10 1 1.1110 -2.1352 -3.6972 11 7 -0.4664 -2.8263 -4.8937 12 6 0.2110 -3.8830 -5.3848 13 8 1.2269 -4.2626 -4.8350 14 6 -0.2797 -4.5784 -6.5901 15 6 0.4182 -5.6798 -7.1086 16 6 -0.0720 -6.2962 -8.2282 17 6 -1.2451 -5.8143 -8.8173 18 6 -1.7783 -6.4741 -10.0227 19 6 -2.9006 -6.1093 -10.6798 20 6 -3.1954 -6.8760 -11.7849 21 6 -2.3335 -7.8692 -12.0328 22 6 -2.4418 -8.8461 -13.1750 23 8 -3.6719 -9.5660 -13.0712 24 14 -1.0149 -10.0422 -13.1067 25 16 -1.0560 -7.8633 -10.8241 26 7 -1.8866 -4.7679 -8.3026 27 6 -1.4492 -4.1534 -7.2257 28 6 -0.4889 -2.8566 -2.4481 29 6 0.0202 -2.1351 -1.1992 30 1 1.1101 0.0286 -2.4487 31 1 -0.3431 1.0562 -2.4487 32 1 -0.1258 -0.1796 -4.5879 33 1 -1.5794 -0.6935 -3.6979 34 1 -1.2767 -2.5233 -5.3325 35 1 1.3223 -6.0331 -6.6352 36 1 0.4415 -7.1466 -8.6517 37 1 -3.5165 -5.2798 -10.3651 38 1 -4.0615 -6.6923 -12.4034 39 1 -2.4167 -8.3041 -14.1203 40 1 -3.7631 -10.0727 -12.2527 41 1 -1.0197 -10.7647 -11.8093 42 1 -1.1105 -11.0114 -14.2276 43 1 -1.9962 -3.3097 -6.8314 44 1 -1.5789 -2.8569 -2.4481 45 1 -0.1256 -3.8843 -2.4480 46 1 -0.3430 -2.6488 -0.3091 47 1 1.1102 -2.1351 -1.1993 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081486_17119696.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:13:42 Heat of formation + Delta-G solvation = 113.952697 kcal Electronic energy + Delta-G solvation = -28526.497446 eV Core-core repulsion = 24499.911260 eV Total energy + Delta-G solvation = -4026.586186 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.137 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -43.58939 -42.60309 -41.30812 -39.89993 -39.22844 -38.10474 -36.16164 -34.67198 -34.25693 -34.01733 -31.95042 -30.86815 -28.26258 -26.22273 -26.00593 -25.80734 -25.11119 -24.24985 -23.48847 -22.83839 -21.44545 -21.22637 -21.14994 -20.18244 -19.89309 -19.64469 -19.10789 -18.29553 -17.80755 -17.60696 -17.49130 -17.28682 -17.05150 -16.87063 -16.84549 -16.50439 -16.20138 -15.96070 -15.73170 -15.57833 -15.32009 -15.29460 -14.87968 -14.77478 -14.54101 -14.44818 -14.32394 -14.28761 -14.22546 -13.99146 -13.55024 -13.28835 -13.10445 -12.87586 -12.36624 -12.15699 -11.95796 -11.63411 -11.46614 -11.42855 -11.28127 -10.16809 -9.94095 -5.61911 -1.80577 -1.23019 -0.69364 -0.56725 -0.30769 0.10227 0.62742 0.64722 0.65007 0.72816 0.73925 0.82951 1.00614 1.15613 1.38680 1.45441 1.55809 1.64112 1.92247 1.95365 2.03553 2.14148 2.19027 2.32637 2.37170 2.47145 2.60786 2.64961 2.70809 2.73229 2.81722 2.84410 2.88328 3.03626 3.06547 3.11340 3.25219 3.29849 3.49112 3.59543 3.60979 3.72763 3.87608 3.93866 4.03795 4.09563 4.15159 4.42021 4.50000 4.64059 4.78704 5.15958 5.75464 5.85204 5.98394 Molecular weight = 361.14amu Principal moments of inertia in cm(-1) A = 0.032855 B = 0.001675 C = 0.001628 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 852.023806 B =16712.391851 C =17189.934246 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.434 0.566 3 H 0.437 0.563 4 H 0.437 0.563 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.138 4.138 8 C -0.128 4.128 9 C 0.141 3.859 10 H 0.097 0.903 11 N -0.728 5.728 12 C 0.574 3.426 13 O -0.527 6.527 14 C -0.209 4.209 15 C -0.001 4.001 16 C -0.172 4.172 17 C 0.241 3.759 18 C -0.176 4.176 19 C -0.072 4.072 20 C -0.115 4.115 21 C -0.199 4.199 22 C -0.036 4.036 23 O -0.520 6.520 24 Si 0.649 3.351 25 S 0.148 5.852 26 N -0.477 5.477 27 C 0.151 3.849 28 C -0.132 4.132 29 C -0.139 4.139 30 H 0.093 0.907 31 H 0.096 0.904 32 H 0.095 0.905 33 H 0.083 0.917 34 H 0.404 0.596 35 H 0.153 0.847 36 H 0.145 0.855 37 H 0.153 0.847 38 H 0.150 0.850 39 H 0.132 0.868 40 H 0.379 0.621 41 H -0.239 1.239 42 H -0.231 1.231 43 H 0.160 0.840 44 H 0.079 0.921 45 H 0.092 0.908 46 H 0.093 0.907 47 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.906 25.268 33.373 42.042 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.263 0.737 3 H 0.266 0.734 4 H 0.266 0.734 5 C -0.080 4.080 6 H 0.161 0.839 7 C -0.176 4.176 8 C -0.166 4.166 9 C 0.036 3.964 10 H 0.115 0.885 11 N -0.381 5.381 12 C 0.362 3.638 13 O -0.404 6.404 14 C -0.214 4.214 15 C -0.027 4.027 16 C -0.193 4.193 17 C 0.105 3.895 18 C -0.293 4.293 19 C -0.105 4.105 20 C -0.145 4.145 21 C -0.317 4.317 22 C -0.148 4.148 23 O -0.327 6.327 24 Si 0.547 3.453 25 S 0.414 5.586 26 N -0.186 5.186 27 C -0.010 4.010 28 C -0.171 4.171 29 C -0.178 4.178 30 H 0.111 0.889 31 H 0.114 0.886 32 H 0.113 0.887 33 H 0.102 0.898 34 H 0.240 0.760 35 H 0.171 0.829 36 H 0.163 0.837 37 H 0.170 0.830 38 H 0.168 0.832 39 H 0.149 0.851 40 H 0.227 0.773 41 H -0.163 1.163 42 H -0.154 1.154 43 H 0.177 0.823 44 H 0.098 0.902 45 H 0.110 0.890 46 H 0.112 0.888 47 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 5.236 23.658 32.874 40.839 hybrid contribution -1.811 0.648 0.842 2.100 sum 3.425 24.306 33.716 41.705 Atomic orbital electron populations 1.42645 1.21354 1.20682 1.18696 0.73733 0.73440 0.73382 1.23583 1.04452 0.95851 0.84076 0.83865 1.22017 1.03367 1.00192 0.92035 1.21778 1.02485 0.94527 0.97847 1.21009 1.00807 0.90253 0.84306 0.88460 1.45844 1.29814 1.32629 1.29769 1.17983 0.83085 0.79500 0.83242 1.90831 1.24217 1.65019 1.60297 1.20850 0.99927 1.01131 0.99517 1.21377 0.97968 0.90844 0.92518 1.21865 0.97262 1.02551 0.97575 1.19094 0.89835 0.89730 0.90887 1.22663 1.02180 1.03507 1.00958 1.20516 0.95675 1.00317 0.93985 1.20119 1.01127 0.94764 0.98466 1.25228 1.00290 1.03592 1.02592 1.24447 0.95625 0.97145 0.97611 1.86658 1.36069 1.65130 1.44850 0.95315 0.83487 0.83298 0.83189 1.84158 1.26758 1.26928 1.20737 1.67768 1.31993 1.07676 1.11159 1.22861 0.91516 0.96697 0.89914 1.21933 1.02112 1.01312 0.91745 1.22040 1.03323 0.90579 1.01819 0.88894 0.88578 0.88670 0.89790 0.76008 0.82925 0.83697 0.82966 0.83203 0.85078 0.77335 1.16313 1.15412 0.82280 0.90249 0.88951 0.88843 0.88972 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.12 4.15 -4.67 -0.02 24.10 16 2 H 0.43 -16.81 8.90 -39.29 -0.35 -17.16 16 3 H 0.44 -17.29 8.96 -39.29 -0.35 -17.65 16 4 H 0.44 -17.20 8.96 -39.29 -0.35 -17.55 16 5 C 0.02 -0.77 3.03 -67.71 -0.20 -0.98 16 6 H 0.14 -4.62 8.14 -51.93 -0.42 -5.05 16 7 C -0.14 3.92 5.43 -26.73 -0.15 3.77 16 8 C -0.13 3.01 5.39 -26.73 -0.14 2.87 16 9 C 0.14 -2.82 2.45 -67.93 -0.17 -2.98 16 10 H 0.10 -1.75 7.58 -51.93 -0.39 -2.14 16 11 N -0.73 12.01 5.03 -54.84 -0.28 11.74 16 12 C 0.57 -6.68 7.73 -12.46 -0.10 -6.77 16 13 O -0.53 4.33 16.07 5.29 0.08 4.42 16 14 C -0.21 2.16 5.89 -104.76 -0.62 1.55 16 15 C 0.00 0.01 9.65 -39.29 -0.38 -0.37 16 16 C -0.17 1.44 9.56 -39.48 -0.38 1.07 16 17 C 0.24 -1.70 6.74 -83.00 -0.56 -2.25 16 18 C -0.18 1.15 6.37 -36.98 -0.24 0.92 16 19 C -0.07 0.47 9.83 -40.90 -0.40 0.07 16 20 C -0.11 0.75 10.00 -41.33 -0.41 0.34 16 21 C -0.20 1.34 5.73 -35.86 -0.21 1.14 16 22 C -0.04 0.24 2.96 36.00 0.11 0.35 16 23 O -0.52 2.75 12.86 -35.23 -0.45 2.29 16 24 Si 0.65 -4.53 30.96 -169.99 -5.26 -9.79 16 25 S 0.15 -1.09 19.42 -107.50 -2.09 -3.18 16 26 N -0.48 3.64 9.93 -9.54 -0.09 3.55 16 27 C 0.15 -1.63 10.71 -17.15 -0.18 -1.81 16 28 C -0.13 2.83 5.49 -26.76 -0.15 2.69 16 29 C -0.14 3.80 5.43 -26.76 -0.15 3.66 16 30 H 0.09 -2.62 8.14 -51.93 -0.42 -3.05 16 31 H 0.10 -2.82 8.14 -51.93 -0.42 -3.24 16 32 H 0.09 -2.05 8.14 -51.93 -0.42 -2.47 16 33 H 0.08 -2.01 8.14 -51.93 -0.42 -2.43 16 34 H 0.40 -7.45 6.65 -40.82 -0.27 -7.72 16 35 H 0.15 -1.49 7.72 -52.49 -0.41 -1.90 16 36 H 0.15 -1.40 7.24 -52.49 -0.38 -1.78 16 37 H 0.15 -1.11 7.97 -52.49 -0.42 -1.53 16 38 H 0.15 -1.08 8.06 -52.49 -0.42 -1.50 16 39 H 0.13 -1.00 7.96 -51.93 -0.41 -1.42 16 40 H 0.38 -3.07 8.70 45.56 0.40 -2.67 16 41 H -0.24 1.29 7.11 56.52 0.40 1.69 16 42 H -0.23 0.88 7.11 56.52 0.40 1.28 16 43 H 0.16 -2.39 6.41 -52.49 -0.34 -2.72 16 44 H 0.08 -1.72 8.14 -51.93 -0.42 -2.15 16 45 H 0.09 -1.60 8.14 -51.93 -0.42 -2.03 16 46 H 0.09 -2.60 8.14 -51.93 -0.42 -3.02 16 47 H 0.09 -2.49 8.14 -51.93 -0.42 -2.91 16 LS Contribution 393.41 15.07 5.93 5.93 Total: 1.00 -43.61 393.41 -13.20 -56.81 By element: Atomic # 1 Polarization: -92.41 SS G_CDS: -6.70 Total: -99.11 kcal Atomic # 6 Polarization: 7.56 SS G_CDS: -4.32 Total: 3.25 kcal Atomic # 7 Polarization: 39.78 SS G_CDS: -0.39 Total: 39.39 kcal Atomic # 8 Polarization: 7.08 SS G_CDS: -0.37 Total: 6.71 kcal Atomic # 14 Polarization: -4.53 SS G_CDS: -5.26 Total: -9.79 kcal Atomic # 16 Polarization: -1.09 SS G_CDS: -2.09 Total: -3.18 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -43.61 -13.20 -56.81 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081486_17119696.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 170.758 kcal (2) G-P(sol) polarization free energy of solvation -43.609 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 127.149 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.196 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -56.805 kcal (6) G-S(sol) free energy of system = (1) + (5) 113.953 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds