Wall clock time and date at job start Mon Mar 8 2021 07:24:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00904 * 1 3 3 H 1.00899 * 109.47611 * 1 2 4 4 H 1.00899 * 109.46899 * 239.99248 * 1 2 3 5 5 C 1.46901 * 109.46955 * 119.99857 * 1 2 3 6 6 H 1.08998 * 112.85264 * 288.80694 * 5 1 2 7 7 C 1.53783 * 113.61241 * 59.99858 * 5 1 2 8 8 C 1.53774 * 87.08230 * 89.11580 * 7 5 1 9 9 H 1.08999 * 113.61699 * 270.80125 * 8 7 5 10 10 C 1.50709 * 113.61560 * 139.98023 * 8 7 5 11 11 C 1.37990 * 119.93950 * 121.80735 * 10 8 7 12 12 C 1.39354 * 119.87746 * 180.29684 * 11 10 8 13 13 C 1.48418 * 120.11961 * 179.72565 * 12 11 10 14 14 C 1.35799 * 127.11082 * 129.72616 * 13 12 11 15 15 C 1.50696 * 125.76720 * 359.96496 * 14 13 12 16 16 O 1.42903 * 109.47131 * 329.71287 * 15 14 13 17 17 Si 1.86305 * 109.47185 * 209.71828 * 15 14 13 18 18 O 1.34086 * 108.46569 * 179.69929 * 14 13 12 19 19 C 1.34166 * 110.74268 * 0.26313 * 18 14 13 20 20 C 1.34371 * 108.99104 * 359.97438 * 19 18 14 21 21 C 1.39309 * 119.76010 * 359.44884 * 12 11 10 22 22 C 1.38042 * 119.87794 * 0.25555 * 21 12 11 23 23 C 1.38309 * 120.11972 * 0.02562 * 22 21 12 24 24 C 1.53782 * 87.17345 * 25.39115 * 8 7 5 25 25 H 1.09002 * 113.61663 * 334.56937 * 7 5 1 26 26 H 1.09006 * 113.69114 * 203.67491 * 7 5 1 27 27 H 1.08001 * 120.06290 * 359.97438 * 11 10 8 28 28 H 1.08999 * 109.47358 * 89.71647 * 15 14 13 29 29 H 0.96700 * 114.00311 * 300.00591 * 16 15 14 30 30 H 1.48499 * 109.99670 * 58.67633 * 17 15 14 31 31 H 1.48497 * 110.00233 * 179.97438 * 17 15 14 32 32 H 1.07999 * 125.50236 * 180.02562 * 19 18 14 33 33 H 1.07998 * 126.99158 * 179.97438 * 20 19 18 34 34 H 1.08002 * 120.06377 * 180.22740 * 21 12 11 35 35 H 1.07998 * 119.94194 * 180.02562 * 22 21 12 36 36 H 1.07999 * 119.87960 * 179.97438 * 23 22 21 37 37 H 1.09003 * 113.61497 * 89.15576 * 24 8 7 38 38 H 1.09001 * 113.61332 * 220.06378 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9513 0.0000 4 1 -0.3363 -0.4758 0.8238 5 6 -0.4896 -0.6925 -1.1995 6 1 -0.3254 -0.1226 -2.1140 7 6 -0.0307 -2.1571 -1.2957 8 6 -1.2961 -2.5235 -0.5026 9 1 -1.1530 -2.5117 0.5779 10 6 -1.9712 -3.7798 -0.9897 11 6 -2.1601 -4.8394 -0.1261 12 6 -2.7790 -6.0027 -0.5796 13 6 -2.9793 -7.1479 0.3431 14 6 -4.1326 -7.8301 0.5638 15 6 -5.4593 -7.5539 -0.0951 16 8 -5.5580 -6.1617 -0.4022 17 14 -6.8390 -8.0339 1.0612 18 8 -3.8898 -8.7948 1.4629 19 6 -2.6060 -8.7699 1.8517 20 6 -1.9729 -7.7758 1.2064 21 6 -3.2141 -6.0847 -1.9004 22 6 -3.0255 -5.0164 -2.7541 23 6 -2.4055 -3.8664 -2.3004 24 6 -1.9239 -1.2330 -1.0550 25 1 0.8956 -2.3606 -0.7584 26 1 -0.0245 -2.5482 -2.3131 27 1 -1.8242 -4.7692 0.8979 28 1 -5.5367 -8.1350 -1.0140 29 1 -5.4971 -5.5832 0.3702 30 1 -6.7261 -7.2714 2.3305 31 1 -8.1529 -7.7657 0.4233 32 1 -2.1541 -9.4411 2.5670 33 1 -0.9337 -7.4975 1.3015 34 1 -3.6976 -6.9826 -2.2560 35 1 -3.3628 -5.0787 -3.7782 36 1 -2.2596 -3.0331 -2.9717 37 1 -2.4369 -1.3697 -2.0069 38 1 -2.5239 -0.6915 -0.3235 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081500_14315888.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:24:28 Heat of formation + Delta-G solvation = 156.014677 kcal Electronic energy + Delta-G solvation = -20928.231551 eV Core-core repulsion = 17823.771642 eV Total energy + Delta-G solvation = -3104.459909 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 273.128 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -44.30045 -44.11642 -41.16559 -39.04683 -38.18661 -35.27179 -33.28279 -32.74613 -31.62733 -29.11230 -28.11990 -27.52618 -25.23398 -24.36533 -23.27582 -22.66232 -22.00432 -21.43001 -21.26830 -19.77107 -19.31125 -18.85993 -18.34977 -18.14457 -17.85651 -17.61527 -16.93648 -16.59770 -16.44887 -16.02714 -15.89640 -15.62381 -15.17056 -15.02821 -14.71995 -14.65313 -14.39530 -14.20409 -13.96809 -13.77434 -13.62694 -13.11328 -13.08183 -12.77153 -12.00033 -11.54219 -10.85055 -10.65439 -10.06090 -5.64816 -1.22278 -0.90734 -0.68733 -0.09539 0.44410 0.45097 0.64393 0.67791 0.83596 0.89661 1.01295 1.24349 1.34230 1.46078 1.60184 1.66907 2.02559 2.19388 2.29476 2.40440 2.48142 2.55562 2.62472 2.75460 2.82867 2.86259 2.92576 3.08655 3.19700 3.25708 3.39661 3.54411 3.59840 3.67533 3.84801 3.96227 4.02873 4.19675 4.36860 4.48123 4.60431 4.67423 4.95082 5.21481 5.46023 Molecular weight = 273.13amu Principal moments of inertia in cm(-1) A = 0.024688 B = 0.005097 C = 0.004795 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1133.881917 B = 5492.420716 C = 5837.743746 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.621 5.621 2 H 0.439 0.561 3 H 0.440 0.560 4 H 0.433 0.567 5 C -0.018 4.018 6 H 0.156 0.844 7 C -0.134 4.134 8 C -0.077 4.077 9 H 0.104 0.896 10 C -0.095 4.095 11 C -0.100 4.100 12 C 0.003 3.997 13 C -0.139 4.139 14 C -0.025 4.025 15 C -0.036 4.036 16 O -0.510 6.510 17 Si 0.707 3.293 18 O -0.167 6.167 19 C -0.017 4.017 20 C -0.208 4.208 21 C -0.071 4.071 22 C -0.111 4.111 23 C -0.117 4.117 24 C -0.136 4.136 25 H 0.094 0.906 26 H 0.127 0.873 27 H 0.120 0.880 28 H 0.135 0.865 29 H 0.376 0.624 30 H -0.259 1.259 31 H -0.246 1.246 32 H 0.210 0.790 33 H 0.152 0.848 34 H 0.123 0.877 35 H 0.127 0.873 36 H 0.119 0.881 37 H 0.128 0.872 38 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 14.095 21.878 1.290 26.057 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.020 5.020 2 H 0.268 0.732 3 H 0.269 0.731 4 H 0.262 0.738 5 C -0.122 4.122 6 H 0.174 0.826 7 C -0.171 4.171 8 C -0.095 4.095 9 H 0.122 0.878 10 C -0.095 4.095 11 C -0.118 4.118 12 C 0.003 3.997 13 C -0.141 4.141 14 C -0.075 4.075 15 C -0.145 4.145 16 O -0.316 6.316 17 Si 0.605 3.395 18 O -0.064 6.064 19 C -0.084 4.084 20 C -0.227 4.227 21 C -0.090 4.090 22 C -0.129 4.129 23 C -0.134 4.134 24 C -0.173 4.173 25 H 0.113 0.887 26 H 0.145 0.855 27 H 0.138 0.862 28 H 0.153 0.847 29 H 0.224 0.776 30 H -0.183 1.183 31 H -0.170 1.170 32 H 0.227 0.773 33 H 0.170 0.830 34 H 0.141 0.859 35 H 0.145 0.855 36 H 0.137 0.863 37 H 0.146 0.854 38 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 13.023 21.600 0.996 25.242 hybrid contribution 0.896 1.200 0.436 1.560 sum 13.919 22.800 1.432 26.751 Atomic orbital electron populations 1.42244 1.21147 1.20525 1.18073 0.73214 0.73146 0.73845 1.24490 1.01466 0.98392 0.87891 0.82623 1.23659 0.99148 0.88877 1.05416 1.21715 0.94695 0.93251 0.99872 0.87830 1.19053 1.01812 0.94440 0.94183 1.20948 0.99394 0.92378 0.99120 1.17938 0.97841 0.91655 0.92283 1.19877 0.92592 0.99767 1.01854 1.22982 0.97730 0.91745 0.95064 1.24277 0.97117 0.86078 1.07052 1.86692 1.94508 1.14174 1.36254 0.94125 0.76494 0.91980 0.76892 1.83809 1.28971 1.46183 1.47443 1.24088 0.81073 1.01285 1.01927 1.22829 1.00307 0.99146 1.00462 1.21222 0.96688 0.98791 0.92251 1.21115 0.98549 0.93102 1.00142 1.20889 0.99536 0.98228 0.94793 1.23738 0.92062 0.95556 1.05984 0.88705 0.85486 0.86238 0.84731 0.77610 1.18264 1.17027 0.77304 0.83014 0.85866 0.85482 0.86277 0.85366 0.88640 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.62 23.00 4.51 -3.90 -0.02 22.98 16 2 H 0.44 -16.94 9.02 -39.29 -0.35 -17.30 16 3 H 0.44 -17.07 9.02 -39.29 -0.35 -17.42 16 4 H 0.43 -16.27 8.00 -39.29 -0.31 -16.59 16 5 C -0.02 0.56 4.97 -66.81 -0.33 0.23 16 6 H 0.16 -4.92 8.14 -51.93 -0.42 -5.34 16 7 C -0.13 3.53 7.34 -25.92 -0.19 3.34 16 8 C -0.08 1.84 3.62 -90.96 -0.33 1.51 16 9 H 0.10 -2.67 7.64 -51.93 -0.40 -3.07 16 10 C -0.09 1.63 5.29 -104.67 -0.55 1.07 16 11 C -0.10 1.40 9.42 -39.26 -0.37 1.03 16 12 C 0.00 -0.03 4.73 -104.89 -0.50 -0.53 16 13 C -0.14 1.31 5.72 -103.16 -0.59 0.72 16 14 C -0.02 0.22 6.22 -35.18 -0.22 0.00 16 15 C -0.04 0.35 2.56 36.00 0.09 0.45 16 16 O -0.51 5.04 10.03 -35.23 -0.35 4.69 16 17 Si 0.71 -6.52 32.37 -169.99 -5.50 -12.02 16 18 O -0.17 1.42 9.36 6.66 0.06 1.48 16 19 C -0.02 0.17 12.05 29.37 0.35 0.52 16 20 C -0.21 2.08 11.13 -37.53 -0.42 1.66 16 21 C -0.07 0.75 7.92 -39.25 -0.31 0.44 16 22 C -0.11 1.36 10.03 -39.63 -0.40 0.97 16 23 C -0.12 1.81 8.53 -39.52 -0.34 1.47 16 24 C -0.14 3.60 7.13 -25.83 -0.18 3.42 16 25 H 0.09 -2.59 8.14 -51.93 -0.42 -3.01 16 26 H 0.13 -3.02 7.64 -51.93 -0.40 -3.42 16 27 H 0.12 -1.80 8.05 -52.49 -0.42 -2.22 16 28 H 0.14 -1.46 7.96 -51.93 -0.41 -1.88 16 29 H 0.38 -4.52 8.70 45.56 0.40 -4.12 16 30 H -0.26 1.74 7.11 56.52 0.40 2.14 16 31 H -0.25 1.55 7.11 56.52 0.40 1.95 16 32 H 0.21 -2.74 8.06 -52.49 -0.42 -3.16 16 33 H 0.15 -1.78 8.06 -52.49 -0.42 -2.20 16 34 H 0.12 -1.20 7.88 -52.49 -0.41 -1.61 16 35 H 0.13 -1.62 8.06 -52.49 -0.42 -2.05 16 36 H 0.12 -2.18 6.71 -52.49 -0.35 -2.53 16 37 H 0.13 -3.08 6.39 -51.93 -0.33 -3.41 16 38 H 0.10 -2.60 8.14 -51.93 -0.42 -3.03 16 LS Contribution 312.76 15.07 4.71 4.71 Total: 1.00 -39.66 312.76 -10.47 -50.13 By element: Atomic # 1 Polarization: -83.18 SS G_CDS: -5.09 Total: -88.27 kcal Atomic # 6 Polarization: 20.58 SS G_CDS: -4.28 Total: 16.30 kcal Atomic # 7 Polarization: 23.00 SS G_CDS: -0.02 Total: 22.98 kcal Atomic # 8 Polarization: 6.46 SS G_CDS: -0.29 Total: 6.17 kcal Atomic # 14 Polarization: -6.52 SS G_CDS: -5.50 Total: -12.02 kcal Total LS contribution 4.71 Total: 4.71 kcal Total: -39.66 -10.47 -50.13 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081500_14315888.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 206.144 kcal (2) G-P(sol) polarization free energy of solvation -39.662 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 166.482 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.467 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -50.130 kcal (6) G-S(sol) free energy of system = (1) + (5) 156.015 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds