Wall clock time and date at job start Mon Mar 8 2021 07:26:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00906 * 1 3 3 H 1.00901 * 109.46957 * 1 2 4 4 H 1.00899 * 109.46894 * 239.99740 * 1 2 3 5 5 C 1.46902 * 109.46698 * 120.00072 * 1 2 3 6 6 H 1.08994 * 109.47230 * 299.99727 * 5 1 2 7 7 C 1.53002 * 109.47116 * 60.00251 * 5 1 2 8 8 C 1.53002 * 109.46803 * 179.97438 * 7 5 1 9 9 C 1.52991 * 109.47133 * 299.99694 * 8 7 5 10 10 H 1.09002 * 109.47389 * 300.00104 * 9 8 7 11 11 N 1.46503 * 109.47397 * 180.02562 * 9 8 7 12 12 C 1.38547 * 120.00330 * 154.99659 * 11 9 8 13 13 C 1.39692 * 120.47970 * 359.72996 * 12 11 9 14 14 C 1.38198 * 118.52179 * 180.29452 * 13 12 11 15 15 N 1.32399 * 119.30831 * 359.97309 * 14 13 12 16 16 C 1.32677 * 120.91827 * 0.02562 * 15 14 13 17 17 C 1.48148 * 119.19277 * 179.97438 * 16 15 14 18 18 C 1.35969 * 127.13997 * 354.24750 * 17 16 15 19 19 C 1.50707 * 125.77226 * 359.97438 * 18 17 16 20 20 O 1.42903 * 109.46929 * 125.24284 * 19 18 17 21 21 Si 1.86300 * 109.46798 * 245.24150 * 19 18 17 22 22 O 1.33919 * 108.45484 * 179.86840 * 18 17 16 23 23 C 1.34186 * 110.79363 * 0.41134 * 22 18 17 24 24 C 1.34300 * 109.02602 * 359.74707 * 23 22 18 25 25 N 1.32632 * 121.60780 * 0.02562 * 16 15 14 26 26 C 1.53003 * 109.47355 * 60.00256 * 9 8 7 27 27 C 1.53000 * 109.46695 * 179.97438 * 5 1 2 28 28 H 1.08994 * 109.47499 * 59.99641 * 7 5 1 29 29 H 1.09000 * 109.46889 * 299.99109 * 7 5 1 30 30 H 1.08996 * 109.47021 * 179.97438 * 8 7 5 31 31 H 1.09002 * 109.47068 * 59.99994 * 8 7 5 32 32 H 0.97000 * 119.99685 * 335.00391 * 11 9 8 33 33 H 1.08003 * 120.74294 * 0.24209 * 13 12 11 34 34 H 1.08005 * 120.34810 * 179.97438 * 14 13 12 35 35 H 1.08999 * 109.47101 * 5.24075 * 19 18 17 36 36 H 0.96698 * 114.00151 * 60.00084 * 20 19 18 37 37 H 1.48507 * 109.99813 * 179.97438 * 21 19 18 38 38 H 1.48498 * 110.00029 * 301.31901 * 21 19 18 39 39 H 1.08000 * 125.48372 * 179.74683 * 23 22 18 40 40 H 1.07999 * 127.00139 * 179.97438 * 24 23 22 41 41 H 1.09002 * 109.46996 * 59.99608 * 26 9 8 42 42 H 1.08999 * 109.47538 * 179.97438 * 26 9 8 43 43 H 1.08994 * 109.47250 * 299.99949 * 27 5 1 44 44 H 1.09005 * 109.46780 * 60.00403 * 27 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0091 0.0000 0.0000 3 1 -0.3363 0.9513 0.0000 4 1 -0.3363 -0.4757 0.8238 5 6 -0.4896 -0.6925 -1.1995 6 1 -0.1263 -0.1787 -2.0894 7 6 0.0204 -2.1351 -1.1994 8 6 -0.4900 -2.8565 -2.4484 9 6 -2.0199 -2.8565 -2.4478 10 1 -2.3830 -3.3702 -1.5576 11 7 -2.5088 -3.5478 -3.6434 12 6 -3.7649 -4.1323 -3.6408 13 6 -4.5714 -4.0735 -2.5017 14 6 -5.8147 -4.6756 -2.5417 15 7 -6.2038 -5.2862 -3.6501 16 6 -5.4174 -5.3270 -4.7179 17 6 -5.8910 -6.0212 -5.9380 18 6 -7.0345 -6.7429 -6.0803 19 6 -8.0636 -6.9839 -5.0060 20 8 -9.3481 -6.5691 -5.4754 21 14 -8.1115 -8.7987 -4.5879 22 8 -7.0927 -7.2015 -7.3372 23 6 -6.0151 -6.8135 -8.0363 24 6 -5.2199 -6.0778 -7.2425 25 7 -4.2172 -4.7624 -4.7193 26 6 -2.5300 -1.4140 -2.4478 27 6 -2.0196 -0.6931 -1.1992 28 1 -0.3429 -2.6489 -0.3095 29 1 1.1104 -2.1350 -1.1995 30 1 -0.1264 -3.8840 -2.4486 31 1 -0.1270 -2.3427 -3.3386 32 1 -1.9529 -3.5963 -4.4368 33 1 -4.2307 -3.5694 -1.6094 34 1 -6.4623 -4.6483 -1.6777 35 1 -7.8002 -6.4127 -4.1159 36 1 -9.6474 -7.0366 -6.2672 37 1 -9.1222 -9.0494 -3.5291 38 1 -8.4383 -9.5909 -5.8006 39 1 -5.8188 -7.0541 -9.0707 40 1 -4.2783 -5.6211 -7.5093 41 1 -2.1670 -0.9003 -3.3380 42 1 -3.6200 -1.4140 -2.4479 43 1 -2.3825 -1.2072 -0.3092 44 1 -2.3832 0.3345 -1.1990 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081500_17085348.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:26:49 Heat of formation + Delta-G solvation = 156.060255 kcal Electronic energy + Delta-G solvation = -26579.386295 eV Core-core repulsion = 22812.037772 eV Total energy + Delta-G solvation = -3767.348522 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.160 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -44.15560 -43.64342 -42.62638 -40.21126 -38.50386 -37.25454 -35.49339 -34.46224 -34.12974 -32.81911 -31.87449 -30.75008 -27.64217 -26.44842 -26.12628 -25.82110 -24.76093 -23.64838 -22.96017 -21.88872 -21.48027 -21.28508 -20.08565 -20.00782 -19.70934 -18.99228 -18.27875 -18.15326 -17.66409 -17.52848 -17.40538 -17.07650 -16.75634 -16.70671 -16.24201 -16.21534 -15.96335 -15.68712 -15.45873 -15.06673 -14.85722 -14.64648 -14.60585 -14.40168 -14.33046 -13.99699 -13.97666 -13.47476 -13.42230 -13.11404 -12.68277 -12.38586 -12.35522 -11.45981 -11.06876 -10.93703 -10.35270 -9.85767 -5.51306 -1.29594 -1.12631 -0.48854 0.14487 0.55743 0.57805 0.64467 0.70479 0.76270 0.89049 1.13217 1.21047 1.38420 1.46364 1.48446 1.56826 1.84556 1.91481 2.06206 2.11759 2.20150 2.22826 2.29966 2.38545 2.49681 2.54765 2.68162 2.75018 2.83049 2.85628 2.95887 3.04247 3.15411 3.21374 3.33187 3.39890 3.48214 3.53705 3.70514 3.90570 4.04679 4.14299 4.32818 4.40240 4.76614 4.83383 5.13825 5.43871 5.53065 5.81514 6.42984 Molecular weight = 318.16amu Principal moments of inertia in cm(-1) A = 0.025235 B = 0.002935 C = 0.002782 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1109.308593 B = 9536.761527 C =10062.203548 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.438 0.562 4 H 0.434 0.566 5 C 0.023 3.977 6 H 0.144 0.856 7 C -0.137 4.137 8 C -0.127 4.127 9 C 0.151 3.849 10 H 0.092 0.908 11 N -0.713 5.713 12 C 0.444 3.556 13 C -0.308 4.308 14 C 0.190 3.810 15 N -0.556 5.556 16 C 0.451 3.549 17 C -0.142 4.142 18 C 0.038 3.962 19 C -0.050 4.050 20 O -0.520 6.520 21 Si 0.690 3.310 22 O -0.174 6.174 23 C -0.033 4.033 24 C -0.170 4.170 25 N -0.565 5.565 26 C -0.138 4.138 27 C -0.139 4.139 28 H 0.093 0.907 29 H 0.096 0.904 30 H 0.096 0.904 31 H 0.084 0.916 32 H 0.411 0.589 33 H 0.139 0.861 34 H 0.172 0.828 35 H 0.172 0.828 36 H 0.378 0.622 37 H -0.242 1.242 38 H -0.251 1.251 39 H 0.212 0.788 40 H 0.160 0.840 41 H 0.082 0.918 42 H 0.091 0.909 43 H 0.091 0.909 44 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 25.173 21.381 19.391 38.299 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.266 0.734 4 H 0.262 0.738 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.175 4.175 8 C -0.166 4.166 9 C 0.044 3.956 10 H 0.109 0.891 11 N -0.346 5.346 12 C 0.200 3.800 13 C -0.335 4.335 14 C 0.027 3.973 15 N -0.274 5.274 16 C 0.187 3.813 17 C -0.146 4.146 18 C -0.017 4.017 19 C -0.159 4.159 20 O -0.326 6.326 21 Si 0.587 3.413 22 O -0.070 6.070 23 C -0.099 4.099 24 C -0.190 4.190 25 N -0.288 5.288 26 C -0.178 4.178 27 C -0.178 4.178 28 H 0.111 0.889 29 H 0.115 0.885 30 H 0.114 0.886 31 H 0.103 0.897 32 H 0.248 0.752 33 H 0.156 0.844 34 H 0.189 0.811 35 H 0.189 0.811 36 H 0.226 0.774 37 H -0.165 1.165 38 H -0.175 1.175 39 H 0.228 0.772 40 H 0.178 0.822 41 H 0.101 0.899 42 H 0.109 0.891 43 H 0.110 0.890 44 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 24.137 20.383 18.970 36.850 hybrid contribution 0.302 1.258 -0.287 1.325 sum 24.439 21.641 18.682 37.611 Atomic orbital electron populations 1.42643 1.21247 1.20729 1.18772 0.73378 0.73352 0.73751 1.23586 0.99609 0.97481 0.87370 0.83824 1.22020 1.02909 0.90790 1.01828 1.21745 0.94235 1.03210 0.97362 1.21038 0.93409 0.91919 0.89187 0.89053 1.44300 1.14976 1.58809 1.16544 1.18346 0.85798 0.86851 0.89029 1.22065 0.98724 1.12745 1.00013 1.22969 0.92461 0.86846 0.95011 1.68150 1.35575 1.22912 1.00794 1.19905 0.83767 0.87689 0.89945 1.18953 0.97372 1.05693 0.92578 1.23283 0.97625 0.96217 0.84552 1.25386 0.79846 1.14915 0.95742 1.86678 1.32451 1.64494 1.48973 0.94761 0.90087 0.73205 0.83199 1.83821 1.41518 1.60933 1.20744 1.24043 0.86025 1.01361 0.98428 1.22732 1.01963 1.03127 0.91183 1.67827 1.16852 1.16078 1.28045 1.22071 1.03457 0.95416 0.96849 1.22048 0.89411 1.04218 1.02108 0.88876 0.88527 0.88567 0.89707 0.75224 0.84358 0.81124 0.81127 0.77354 1.16521 1.17516 0.77174 0.82224 0.89943 0.89051 0.89004 0.88765 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.67 4.15 -4.67 -0.02 24.65 16 2 H 0.44 -17.59 8.96 -39.29 -0.35 -17.94 16 3 H 0.44 -17.54 8.96 -39.29 -0.35 -17.89 16 4 H 0.43 -17.28 8.90 -39.29 -0.35 -17.63 16 5 C 0.02 -0.77 3.03 -67.71 -0.20 -0.97 16 6 H 0.14 -4.71 8.14 -51.93 -0.42 -5.14 16 7 C -0.14 4.03 5.43 -26.73 -0.15 3.88 16 8 C -0.13 3.05 5.39 -26.73 -0.14 2.91 16 9 C 0.15 -3.23 2.15 -67.93 -0.15 -3.38 16 10 H 0.09 -1.97 6.50 -51.93 -0.34 -2.31 16 11 N -0.71 11.45 5.23 -53.80 -0.28 11.17 16 12 C 0.44 -5.11 7.69 -154.87 -1.19 -6.30 16 13 C -0.31 3.99 8.94 -39.05 -0.35 3.64 16 14 C 0.19 -2.02 11.28 -17.32 -0.20 -2.21 16 15 N -0.56 3.88 7.46 -11.24 -0.08 3.79 16 16 C 0.45 -2.65 7.59 -156.91 -1.19 -3.85 16 17 C -0.14 0.70 6.31 -103.18 -0.65 0.05 16 18 C 0.04 -0.18 5.41 -35.12 -0.19 -0.37 16 19 C -0.05 0.27 2.92 36.01 0.11 0.37 16 20 O -0.52 2.18 12.88 -35.23 -0.45 1.72 16 21 Si 0.69 -4.33 33.09 -169.99 -5.62 -9.95 16 22 O -0.17 0.85 10.39 7.04 0.07 0.92 16 23 C -0.03 0.23 12.04 29.34 0.35 0.58 16 24 C -0.17 1.07 10.96 -37.51 -0.41 0.66 16 25 N -0.56 4.28 10.24 -10.40 -0.11 4.17 16 26 C -0.14 3.19 5.47 -26.75 -0.15 3.04 16 27 C -0.14 4.03 5.42 -26.75 -0.15 3.89 16 28 H 0.09 -2.76 8.14 -51.93 -0.42 -3.18 16 29 H 0.10 -2.89 8.14 -51.93 -0.42 -3.31 16 30 H 0.10 -2.09 8.14 -51.93 -0.42 -2.51 16 31 H 0.08 -2.01 8.14 -51.93 -0.42 -2.43 16 32 H 0.41 -6.48 8.73 -40.82 -0.36 -6.84 16 33 H 0.14 -2.35 6.31 -52.48 -0.33 -2.68 16 34 H 0.17 -2.33 8.06 -52.48 -0.42 -2.75 16 35 H 0.17 -0.95 5.00 -51.93 -0.26 -1.21 16 36 H 0.38 -2.63 8.70 45.56 0.40 -2.24 16 37 H -0.24 0.96 7.11 56.52 0.40 1.36 16 38 H -0.25 0.96 7.11 56.52 0.40 1.36 16 39 H 0.21 -2.18 8.06 -52.49 -0.42 -2.61 16 40 H 0.16 -1.25 8.06 -52.49 -0.42 -1.67 16 41 H 0.08 -1.82 8.14 -51.93 -0.42 -2.24 16 42 H 0.09 -1.82 7.79 -51.93 -0.40 -2.23 16 43 H 0.09 -2.70 8.14 -51.93 -0.42 -3.12 16 44 H 0.09 -2.75 8.14 -51.93 -0.42 -3.17 16 LS Contribution 356.85 15.07 5.38 5.38 Total: 1.00 -44.62 356.85 -11.96 -56.58 By element: Atomic # 1 Polarization: -94.19 SS G_CDS: -6.19 Total: -100.38 kcal Atomic # 6 Polarization: 6.60 SS G_CDS: -4.65 Total: 1.95 kcal Atomic # 7 Polarization: 44.27 SS G_CDS: -0.49 Total: 43.78 kcal Atomic # 8 Polarization: 3.02 SS G_CDS: -0.38 Total: 2.64 kcal Atomic # 14 Polarization: -4.33 SS G_CDS: -5.62 Total: -9.95 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -44.62 -11.96 -56.58 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081500_17085348.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 212.642 kcal (2) G-P(sol) polarization free energy of solvation -44.617 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 168.025 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.965 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -56.582 kcal (6) G-S(sol) free energy of system = (1) + (5) 156.060 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds