Wall clock time and date at job start Mon Mar 8 2021 07:26:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00906 * 1 3 3 H 1.00901 * 109.46957 * 1 2 4 4 H 1.00899 * 109.46894 * 239.99740 * 1 2 3 5 5 C 1.46902 * 109.46698 * 120.00072 * 1 2 3 6 6 H 1.08994 * 109.47230 * 299.99727 * 5 1 2 7 7 C 1.53002 * 109.47116 * 60.00251 * 5 1 2 8 8 C 1.53002 * 109.46803 * 179.97438 * 7 5 1 9 9 C 1.52991 * 109.47133 * 299.99694 * 8 7 5 10 10 H 1.09002 * 109.47389 * 300.00104 * 9 8 7 11 11 N 1.46503 * 109.47397 * 180.02562 * 9 8 7 12 12 C 1.38547 * 120.00330 * 154.99659 * 11 9 8 13 13 C 1.39692 * 120.47970 * 359.72996 * 12 11 9 14 14 C 1.38198 * 118.52179 * 180.29452 * 13 12 11 15 15 N 1.32399 * 119.30831 * 359.97309 * 14 13 12 16 16 C 1.32677 * 120.91827 * 0.02562 * 15 14 13 17 17 C 1.48148 * 119.19277 * 179.97438 * 16 15 14 18 18 C 1.35969 * 127.13997 * 354.24750 * 17 16 15 19 19 C 1.50707 * 125.77226 * 359.97438 * 18 17 16 20 20 O 1.42903 * 109.46929 * 125.24284 * 19 18 17 21 21 Si 1.86300 * 109.46798 * 245.24150 * 19 18 17 22 22 O 1.33919 * 108.45484 * 179.86840 * 18 17 16 23 23 C 1.34186 * 110.79363 * 0.41134 * 22 18 17 24 24 C 1.34300 * 109.02602 * 359.74707 * 23 22 18 25 25 N 1.32632 * 121.60780 * 0.02562 * 16 15 14 26 26 C 1.53003 * 109.47355 * 60.00256 * 9 8 7 27 27 C 1.53000 * 109.46695 * 179.97438 * 5 1 2 28 28 H 1.08994 * 109.47499 * 59.99641 * 7 5 1 29 29 H 1.09000 * 109.46889 * 299.99109 * 7 5 1 30 30 H 1.08996 * 109.47021 * 179.97438 * 8 7 5 31 31 H 1.09002 * 109.47068 * 59.99994 * 8 7 5 32 32 H 0.97000 * 119.99685 * 335.00391 * 11 9 8 33 33 H 1.08003 * 120.74294 * 0.24209 * 13 12 11 34 34 H 1.08005 * 120.34810 * 179.97438 * 14 13 12 35 35 H 1.08999 * 109.47101 * 5.24075 * 19 18 17 36 36 H 0.96698 * 114.00151 * 60.00084 * 20 19 18 37 37 H 1.48507 * 109.99813 * 179.97438 * 21 19 18 38 38 H 1.48498 * 110.00029 * 301.31901 * 21 19 18 39 39 H 1.08000 * 125.48372 * 179.74683 * 23 22 18 40 40 H 1.07999 * 127.00139 * 179.97438 * 24 23 22 41 41 H 1.09002 * 109.46996 * 59.99608 * 26 9 8 42 42 H 1.08999 * 109.47538 * 179.97438 * 26 9 8 43 43 H 1.08994 * 109.47250 * 299.99949 * 27 5 1 44 44 H 1.09005 * 109.46780 * 60.00403 * 27 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0091 0.0000 0.0000 3 1 -0.3363 0.9513 0.0000 4 1 -0.3363 -0.4757 0.8238 5 6 -0.4896 -0.6925 -1.1995 6 1 -0.1263 -0.1787 -2.0894 7 6 0.0204 -2.1351 -1.1994 8 6 -0.4900 -2.8565 -2.4484 9 6 -2.0199 -2.8565 -2.4478 10 1 -2.3830 -3.3702 -1.5576 11 7 -2.5088 -3.5478 -3.6434 12 6 -3.7649 -4.1323 -3.6408 13 6 -4.5714 -4.0735 -2.5017 14 6 -5.8147 -4.6756 -2.5417 15 7 -6.2038 -5.2862 -3.6501 16 6 -5.4174 -5.3270 -4.7179 17 6 -5.8910 -6.0212 -5.9380 18 6 -7.0345 -6.7429 -6.0803 19 6 -8.0636 -6.9839 -5.0060 20 8 -9.3481 -6.5691 -5.4754 21 14 -8.1115 -8.7987 -4.5879 22 8 -7.0927 -7.2015 -7.3372 23 6 -6.0151 -6.8135 -8.0363 24 6 -5.2199 -6.0778 -7.2425 25 7 -4.2172 -4.7624 -4.7193 26 6 -2.5300 -1.4140 -2.4478 27 6 -2.0196 -0.6931 -1.1992 28 1 -0.3429 -2.6489 -0.3095 29 1 1.1104 -2.1350 -1.1995 30 1 -0.1264 -3.8840 -2.4486 31 1 -0.1270 -2.3427 -3.3386 32 1 -1.9529 -3.5963 -4.4368 33 1 -4.2307 -3.5694 -1.6094 34 1 -6.4623 -4.6483 -1.6777 35 1 -7.8002 -6.4127 -4.1159 36 1 -9.6474 -7.0366 -6.2672 37 1 -9.1222 -9.0494 -3.5291 38 1 -8.4383 -9.5909 -5.8006 39 1 -5.8188 -7.0541 -9.0707 40 1 -4.2783 -5.6211 -7.5093 41 1 -2.1670 -0.9003 -3.3380 42 1 -3.6200 -1.4140 -2.4479 43 1 -2.3825 -1.2072 -0.3092 44 1 -2.3832 0.3345 -1.1990 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_273584_18081500_17085348.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:26:48 Heat of formation + Delta-G solvation = 120.923134 kcal Electronic energy + Delta-G solvation = -26580.909955 eV Core-core repulsion = 22812.037772 eV Total energy + Delta-G solvation = -3768.872182 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.160 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -43.63290 -41.93138 -41.00738 -38.37193 -38.06741 -35.67079 -34.80131 -33.36153 -32.16571 -31.96940 -31.00067 -28.99012 -27.01782 -25.49697 -24.69039 -23.99594 -23.19786 -22.41233 -21.41085 -21.19521 -19.38161 -19.01294 -18.46808 -18.31392 -18.17009 -17.61301 -17.46095 -17.09564 -16.61246 -16.44508 -16.13076 -16.03796 -15.78953 -15.30074 -15.26140 -14.80270 -14.41464 -14.20837 -14.06704 -13.95474 -13.85448 -13.45544 -13.40024 -13.07460 -12.83185 -12.71608 -12.34392 -12.22685 -12.22312 -11.71241 -11.67141 -11.47918 -11.37201 -10.97155 -10.38926 -10.19768 -9.48621 -9.09714 -5.06390 -0.40562 0.39275 0.70984 1.16513 1.45276 1.56121 1.57089 1.72447 1.86885 1.93736 2.86400 2.98349 3.12750 3.26040 3.29724 3.34488 3.49573 3.62604 3.66835 3.76766 3.87977 3.96275 4.06870 4.12426 4.14048 4.19701 4.37403 4.37970 4.47208 4.49309 4.53430 4.60270 4.62598 4.66200 4.70987 4.83137 4.87434 4.95128 5.02103 5.06820 5.10637 5.19045 5.25773 5.34490 5.37109 5.82074 5.98174 6.17065 6.31402 6.53588 7.23242 Molecular weight = 318.16amu Principal moments of inertia in cm(-1) A = 0.025235 B = 0.002935 C = 0.002782 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1109.308593 B = 9536.761527 C =10062.203548 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.618 5.618 2 H 0.450 0.550 3 H 0.450 0.550 4 H 0.444 0.556 5 C 0.049 3.951 6 H 0.148 0.852 7 C -0.134 4.134 8 C -0.127 4.127 9 C 0.142 3.858 10 H 0.096 0.904 11 N -0.706 5.706 12 C 0.429 3.571 13 C -0.287 4.287 14 C 0.167 3.833 15 N -0.582 5.582 16 C 0.422 3.578 17 C -0.150 4.150 18 C 0.014 3.986 19 C -0.056 4.056 20 O -0.539 6.539 21 Si 0.766 3.234 22 O -0.189 6.189 23 C -0.031 4.031 24 C -0.185 4.185 25 N -0.591 5.591 26 C -0.138 4.138 27 C -0.136 4.136 28 H 0.103 0.897 29 H 0.110 0.890 30 H 0.068 0.932 31 H 0.079 0.921 32 H 0.407 0.593 33 H 0.180 0.820 34 H 0.197 0.803 35 H 0.171 0.829 36 H 0.387 0.613 37 H -0.271 1.271 38 H -0.284 1.284 39 H 0.243 0.757 40 H 0.169 0.831 41 H 0.069 0.931 42 H 0.057 0.943 43 H 0.105 0.895 44 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 27.696 23.664 21.944 42.528 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.020 5.020 2 H 0.282 0.718 3 H 0.281 0.719 4 H 0.275 0.725 5 C -0.057 4.057 6 H 0.165 0.835 7 C -0.172 4.172 8 C -0.166 4.166 9 C 0.038 3.962 10 H 0.114 0.886 11 N -0.337 5.337 12 C 0.183 3.817 13 C -0.314 4.314 14 C 0.007 3.993 15 N -0.302 5.302 16 C 0.156 3.844 17 C -0.154 4.154 18 C -0.040 4.040 19 C -0.163 4.163 20 O -0.347 6.347 21 Si 0.667 3.333 22 O -0.085 6.085 23 C -0.096 4.096 24 C -0.205 4.205 25 N -0.316 5.316 26 C -0.178 4.178 27 C -0.174 4.174 28 H 0.121 0.879 29 H 0.129 0.871 30 H 0.087 0.913 31 H 0.097 0.903 32 H 0.243 0.757 33 H 0.197 0.803 34 H 0.214 0.786 35 H 0.188 0.812 36 H 0.236 0.764 37 H -0.197 1.197 38 H -0.210 1.210 39 H 0.259 0.741 40 H 0.186 0.814 41 H 0.088 0.912 42 H 0.076 0.924 43 H 0.123 0.877 44 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges 26.721 22.731 21.585 41.190 hybrid contribution -0.357 0.646 -1.058 1.290 sum 26.364 23.377 20.527 40.778 Atomic orbital electron populations 1.42240 1.22103 1.20921 1.16731 0.71835 0.71909 0.72541 1.22865 0.96690 0.96073 0.90041 0.83456 1.21953 1.03679 0.92471 0.99110 1.21711 0.92024 1.02558 1.00316 1.21499 0.95307 0.92432 0.86992 0.88590 1.44753 1.13163 1.57681 1.18144 1.18812 0.87430 0.86669 0.88745 1.22430 0.97364 1.10893 1.00716 1.23523 0.93931 0.87025 0.94858 1.68070 1.36183 1.24307 1.01605 1.19861 0.84894 0.89365 0.90237 1.19359 0.97375 1.05086 0.93600 1.23287 0.98235 0.97665 0.84814 1.25533 0.79320 1.15691 0.95795 1.86626 1.33155 1.65276 1.49606 0.93821 0.88340 0.71222 0.79892 1.83798 1.42356 1.61399 1.20974 1.24700 0.85116 1.00385 0.99390 1.22936 1.02600 1.03882 0.91099 1.67781 1.16639 1.17214 1.30007 1.21965 1.01428 0.94700 0.99703 1.21958 0.92263 1.03960 0.99267 0.87863 0.87147 0.91288 0.90255 0.75728 0.80300 0.78604 0.81198 0.76367 1.19685 1.21032 0.74112 0.81397 0.91232 0.92393 0.87704 0.87774 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.62 49.15 4.15 -168.68 -0.70 48.45 16 2 H 0.45 -37.22 8.96 -89.69 -0.80 -38.03 16 3 H 0.45 -37.02 8.96 -89.69 -0.80 -37.82 16 4 H 0.44 -36.42 8.90 -89.69 -0.80 -37.22 16 5 C 0.05 -3.31 3.03 44.92 0.14 -3.17 16 6 H 0.15 -9.85 8.14 -2.39 -0.02 -9.87 16 7 C -0.13 7.97 5.43 30.60 0.17 8.13 16 8 C -0.13 5.95 5.39 30.59 0.16 6.11 16 9 C 0.14 -5.85 2.15 44.99 0.10 -5.76 16 10 H 0.10 -4.08 6.50 -2.39 -0.02 -4.09 16 11 N -0.71 20.74 5.23 -324.11 -1.69 19.05 16 12 C 0.43 -8.65 7.69 133.22 1.02 -7.63 16 13 C -0.29 6.95 8.94 22.61 0.20 7.15 16 14 C 0.17 -3.18 11.28 84.60 0.95 -2.23 16 15 N -0.58 6.12 7.46 -189.48 -1.41 4.70 16 16 C 0.42 -3.31 7.59 137.45 1.04 -2.27 16 17 C -0.15 0.90 6.31 -18.93 -0.12 0.78 16 18 C 0.01 -0.08 5.41 25.16 0.14 0.05 16 19 C -0.06 0.40 2.92 71.24 0.21 0.61 16 20 O -0.54 2.69 12.88 -148.98 -1.92 0.77 16 21 Si 0.77 -7.31 33.09 68.60 2.27 -5.04 16 22 O -0.19 1.23 10.39 2.29 0.02 1.25 16 23 C -0.03 0.35 12.04 66.92 0.81 1.15 16 24 C -0.19 1.73 10.96 23.61 0.26 1.99 16 25 N -0.59 6.75 10.24 -186.81 -1.91 4.83 16 26 C -0.14 6.18 5.47 30.58 0.17 6.35 16 27 C -0.14 7.97 5.42 30.58 0.17 8.13 16 28 H 0.10 -6.27 8.14 -2.39 -0.02 -6.29 16 29 H 0.11 -6.75 8.14 -2.39 -0.02 -6.77 16 30 H 0.07 -2.81 8.14 -2.39 -0.02 -2.83 16 31 H 0.08 -3.60 8.14 -2.39 -0.02 -3.62 16 32 H 0.41 -11.46 8.73 -92.71 -0.81 -12.27 16 33 H 0.18 -6.07 6.31 -2.91 -0.02 -6.09 16 34 H 0.20 -5.09 8.06 -2.91 -0.02 -5.11 16 35 H 0.17 -1.26 5.00 -2.39 -0.01 -1.28 16 36 H 0.39 -4.05 8.70 -74.06 -0.64 -4.69 16 37 H -0.27 1.37 7.11 99.48 0.71 2.08 16 38 H -0.28 1.24 7.11 99.48 0.71 1.94 16 39 H 0.24 -4.71 8.06 -2.91 -0.02 -4.73 16 40 H 0.17 -2.07 8.06 -2.91 -0.02 -2.10 16 41 H 0.07 -2.91 8.14 -2.39 -0.02 -2.93 16 42 H 0.06 -2.17 7.79 -2.39 -0.02 -2.19 16 43 H 0.10 -6.34 8.14 -2.39 -0.02 -6.35 16 44 H 0.10 -6.18 8.14 -2.38 -0.02 -6.20 16 Total: 1.00 -100.38 356.85 -2.67 -103.05 By element: Atomic # 1 Polarization: -193.73 SS G_CDS: -2.74 Total: -196.47 kcal Atomic # 6 Polarization: 14.00 SS G_CDS: 5.41 Total: 19.41 kcal Atomic # 7 Polarization: 82.75 SS G_CDS: -5.72 Total: 77.03 kcal Atomic # 8 Polarization: 3.92 SS G_CDS: -1.90 Total: 2.02 kcal Atomic # 14 Polarization: -7.31 SS G_CDS: 2.27 Total: -5.04 kcal Total: -100.38 -2.67 -103.05 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081500_17085348.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 223.974 kcal (2) G-P(sol) polarization free energy of solvation -100.376 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 123.597 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.674 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -103.050 kcal (6) G-S(sol) free energy of system = (1) + (5) 120.923 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds