Wall clock time and date at job start Mon Mar 8 2021 08:05:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00903 * 1 3 3 H 1.00899 * 109.46725 * 1 2 4 4 H 1.00900 * 109.47264 * 240.00682 * 1 2 3 5 5 C 1.46899 * 109.47307 * 120.00054 * 1 2 3 6 6 H 1.08995 * 109.47636 * 300.00202 * 5 1 2 7 7 C 1.53005 * 109.47007 * 60.00484 * 5 1 2 8 8 C 1.53000 * 109.47003 * 179.97438 * 7 5 1 9 9 C 1.52999 * 109.46977 * 299.99668 * 8 7 5 10 10 H 1.09000 * 109.46825 * 300.00004 * 9 8 7 11 11 N 1.46503 * 109.46907 * 179.97438 * 9 8 7 12 12 C 1.34777 * 120.00040 * 154.99790 * 11 9 8 13 13 O 1.21548 * 119.99766 * 0.02562 * 12 11 9 14 14 C 1.47906 * 120.00027 * 179.97438 * 12 11 9 15 15 C 1.39970 * 120.06912 * 179.97438 * 14 12 11 16 16 C 1.38410 * 118.02150 * 179.75233 * 15 14 12 17 17 C 1.39807 * 118.00700 * 0.52687 * 16 15 14 18 18 C 1.48062 * 120.07600 * 179.73779 * 17 16 15 19 19 C 1.36052 * 127.14557 * 226.61778 * 18 17 16 20 20 C 1.50700 * 125.78336 * 0.04180 * 19 18 17 21 21 O 1.42896 * 109.47105 * 37.10835 * 20 19 18 22 22 Si 1.86302 * 109.47387 * 157.10970 * 20 19 18 23 23 O 1.33936 * 108.43675 * 180.02562 * 19 18 17 24 24 C 1.34193 * 110.80154 * 359.97438 * 23 19 18 25 25 C 1.34299 * 109.04310 * 0.02562 * 24 23 19 26 26 N 1.33111 * 119.84926 * 359.46367 * 17 16 15 27 27 N 1.28367 * 122.12136 * 0.27678 * 26 17 16 28 28 C 1.52995 * 109.46969 * 60.00220 * 9 8 7 29 29 C 1.52999 * 109.46833 * 180.02562 * 5 1 2 30 30 H 1.08995 * 109.47153 * 59.99421 * 7 5 1 31 31 H 1.09002 * 109.46432 * 299.99437 * 7 5 1 32 32 H 1.09001 * 109.46720 * 179.97438 * 8 7 5 33 33 H 1.09004 * 109.46947 * 59.99640 * 8 7 5 34 34 H 0.97002 * 120.00160 * 335.00109 * 11 9 8 35 35 H 1.08000 * 120.98245 * 0.02562 * 15 14 12 36 36 H 1.07997 * 120.99363 * 180.26574 * 16 15 14 37 37 H 1.09004 * 109.47092 * 277.11018 * 20 19 18 38 38 H 0.96704 * 113.99967 * 180.02562 * 21 20 19 39 39 H 1.48493 * 109.99965 * 178.67940 * 22 20 19 40 40 H 1.48494 * 109.99946 * 300.00301 * 22 20 19 41 41 H 1.07998 * 125.47542 * 180.02562 * 24 23 19 42 42 H 1.08002 * 126.99335 * 179.73929 * 25 24 23 43 43 H 1.09000 * 109.47524 * 60.00212 * 28 9 8 44 44 H 1.09005 * 109.46890 * 179.97438 * 28 9 8 45 45 H 1.09004 * 109.47259 * 299.99863 * 29 5 1 46 46 H 1.09001 * 109.47672 * 60.00326 * 29 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3363 0.9513 0.0000 4 1 -0.3364 -0.4755 0.8239 5 6 -0.4897 -0.6925 -1.1994 6 1 -0.1264 -0.1788 -2.0894 7 6 0.0202 -2.1351 -1.1993 8 6 -0.4904 -2.8565 -2.4482 9 6 -2.0204 -2.8564 -2.4475 10 1 -2.3833 -3.3701 -1.5573 11 7 -2.5092 -3.5467 -3.6437 12 6 -3.7312 -4.1153 -3.6415 13 8 -4.4278 -4.0549 -2.6473 14 6 -4.2250 -4.8117 -4.8494 15 6 -5.4936 -5.4031 -4.8485 16 6 -5.9153 -6.0392 -6.0032 17 6 -5.0436 -6.0617 -7.0961 18 6 -5.4457 -6.7346 -8.3521 19 6 -4.7038 -7.6009 -9.0939 20 6 -3.3022 -8.0552 -8.7777 21 8 -3.1596 -8.2118 -7.3645 22 14 -2.9726 -9.6843 -9.6193 23 8 -5.4303 -7.9817 -10.1527 24 6 -6.6369 -7.3947 -10.1387 25 6 -6.7277 -6.6054 -9.0560 26 7 -3.8536 -5.4720 -7.0066 27 7 -3.4650 -4.8776 -5.9372 28 6 -2.5302 -1.4139 -2.4476 29 6 -2.0197 -0.6919 -1.1996 30 1 -0.3431 -2.6488 -0.3093 31 1 1.1102 -2.1350 -1.1994 32 1 -0.1267 -3.8841 -2.4483 33 1 -0.1274 -2.3428 -3.3385 34 1 -1.9535 -3.5946 -4.4373 35 1 -6.1263 -5.3604 -3.9743 36 1 -6.8868 -6.5078 -6.0569 37 1 -2.5898 -7.3113 -9.1345 38 1 -2.2799 -8.5028 -7.0877 39 1 -1.5829 -10.1276 -9.3413 40 1 -3.9372 -10.7071 -9.1415 41 1 -7.4106 -7.5345 -10.8792 42 1 -7.5706 -5.9962 -8.7647 43 1 -2.1673 -0.9003 -3.3378 44 1 -3.6203 -1.4139 -2.4475 45 1 -2.3834 -1.2054 -0.3096 46 1 -2.3827 0.3359 -1.1999 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081500_17088014.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:05:06 Heat of formation + Delta-G solvation = 126.263878 kcal Electronic energy + Delta-G solvation = -30022.482866 eV Core-core repulsion = 25806.933943 eV Total energy + Delta-G solvation = -4215.548923 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.160 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -44.21452 -43.54977 -42.83831 -41.46057 -39.24093 -38.74245 -36.27740 -35.73596 -34.90922 -33.97226 -33.36556 -32.32201 -31.18011 -28.03999 -26.99404 -26.19085 -26.10230 -25.39947 -23.65268 -23.33602 -22.87921 -21.94493 -21.44270 -21.19626 -20.25675 -19.86359 -19.47613 -19.36337 -19.26506 -18.40573 -17.83210 -17.70585 -17.39867 -17.20438 -17.13300 -16.67159 -16.43453 -16.26623 -16.21684 -16.05560 -15.55298 -15.54776 -15.25176 -15.09835 -14.82186 -14.74172 -14.57805 -14.49958 -14.33178 -14.17678 -13.53180 -13.48565 -13.36443 -13.24218 -12.62706 -12.36771 -12.17090 -12.06619 -11.64634 -11.42537 -11.35487 -11.05544 -10.06619 -5.53994 -1.52797 -1.19829 -0.99953 -0.08009 0.52238 0.57035 0.67309 0.68775 0.75940 0.85510 0.87665 0.88054 1.06476 1.37311 1.48881 1.59182 1.67744 1.80821 1.91642 1.98968 2.07430 2.22296 2.33338 2.40081 2.42051 2.57544 2.67865 2.70991 2.78736 2.85828 2.86231 2.90325 2.92459 3.06545 3.17661 3.17954 3.30983 3.40182 3.52679 3.62015 3.64532 3.79116 3.87651 3.99052 4.06810 4.15882 4.27093 4.38120 4.66334 5.22307 5.36707 5.63243 5.94497 6.74691 Molecular weight = 346.16amu Principal moments of inertia in cm(-1) A = 0.020008 B = 0.002355 C = 0.002195 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1399.084122 B =11887.844470 C =12753.963174 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.437 0.563 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.137 4.137 8 C -0.128 4.128 9 C 0.140 3.860 10 H 0.097 0.903 11 N -0.712 5.712 12 C 0.589 3.411 13 O -0.524 6.524 14 C 0.000 4.000 15 C -0.059 4.059 16 C -0.108 4.108 17 C 0.193 3.807 18 C -0.141 4.141 19 C 0.055 3.945 20 C -0.035 4.035 21 O -0.531 6.531 22 Si 0.704 3.296 23 O -0.164 6.164 24 C -0.013 4.013 25 C -0.196 4.196 26 N -0.219 5.219 27 N -0.206 5.206 28 C -0.132 4.132 29 C -0.138 4.138 30 H 0.092 0.908 31 H 0.096 0.904 32 H 0.095 0.905 33 H 0.085 0.915 34 H 0.416 0.584 35 H 0.163 0.837 36 H 0.160 0.840 37 H 0.103 0.897 38 H 0.390 0.610 39 H -0.251 1.251 40 H -0.252 1.252 41 H 0.217 0.783 42 H 0.160 0.840 43 H 0.080 0.920 44 H 0.092 0.908 45 H 0.092 0.908 46 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 15.834 22.251 20.729 34.285 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.265 0.735 3 H 0.266 0.734 4 H 0.262 0.738 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.175 4.175 8 C -0.166 4.166 9 C 0.035 3.965 10 H 0.115 0.885 11 N -0.364 5.364 12 C 0.373 3.627 13 O -0.398 6.398 14 C -0.146 4.146 15 C -0.088 4.088 16 C -0.137 4.137 17 C 0.053 3.947 18 C -0.144 4.144 19 C 0.003 3.997 20 C -0.144 4.144 21 O -0.340 6.340 22 Si 0.602 3.398 23 O -0.061 6.061 24 C -0.079 4.079 25 C -0.216 4.216 26 N -0.064 5.064 27 N -0.053 5.053 28 C -0.171 4.171 29 C -0.177 4.177 30 H 0.111 0.889 31 H 0.114 0.886 32 H 0.113 0.887 33 H 0.103 0.897 34 H 0.253 0.747 35 H 0.181 0.819 36 H 0.177 0.823 37 H 0.120 0.880 38 H 0.239 0.761 39 H -0.175 1.175 40 H -0.176 1.176 41 H 0.233 0.767 42 H 0.177 0.823 43 H 0.099 0.901 44 H 0.110 0.890 45 H 0.110 0.890 46 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 16.371 21.709 20.413 34.000 hybrid contribution -0.735 0.130 1.709 1.865 sum 15.636 21.839 22.122 34.797 Atomic orbital electron populations 1.42647 1.21156 1.20704 1.18848 0.73454 0.73404 0.73753 1.23595 0.99693 0.97457 0.87278 0.83804 1.22017 1.02744 0.90844 1.01944 1.21771 0.94398 1.03117 0.97327 1.21048 0.93074 0.92429 0.89965 0.88464 1.45757 1.17775 1.55888 1.17020 1.17542 0.81455 0.77734 0.85992 1.90842 1.56321 1.59378 1.33246 1.22512 0.94691 1.01629 0.95763 1.22320 0.94962 0.92187 0.99332 1.22432 1.01752 0.97667 0.91870 1.20499 0.90681 0.91229 0.92321 1.19216 0.95584 1.03327 0.96321 1.21408 0.93523 0.97506 0.87310 1.23765 0.91242 1.12107 0.87270 1.86442 1.38064 1.90199 1.19264 0.94361 0.80652 0.74660 0.90099 1.83768 1.24339 1.57405 1.40558 1.24077 0.85751 0.97136 1.00966 1.22801 0.97634 1.04504 0.96671 1.73400 1.12845 1.05081 1.15089 1.73143 1.27178 1.09501 0.95492 1.21939 1.03606 0.94990 0.96613 1.22035 0.89261 1.04061 1.02330 0.88924 0.88583 0.88663 0.89653 0.74705 0.81913 0.82285 0.87991 0.76082 1.17494 1.17602 0.76682 0.82286 0.90129 0.88961 0.88985 0.88832 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 23.81 4.15 -4.67 -0.02 23.79 16 2 H 0.44 -17.08 8.96 -39.29 -0.35 -17.43 16 3 H 0.44 -17.00 8.96 -39.29 -0.35 -17.35 16 4 H 0.43 -16.63 8.90 -39.29 -0.35 -16.98 16 5 C 0.02 -0.74 3.02 -67.71 -0.20 -0.94 16 6 H 0.14 -4.54 8.14 -51.93 -0.42 -4.96 16 7 C -0.14 3.80 5.43 -26.73 -0.15 3.65 16 8 C -0.13 2.85 5.39 -26.73 -0.14 2.71 16 9 C 0.14 -2.62 2.46 -67.93 -0.17 -2.79 16 10 H 0.10 -1.67 7.58 -51.93 -0.39 -2.07 16 11 N -0.71 10.18 5.07 -54.73 -0.28 9.91 16 12 C 0.59 -5.84 7.77 -12.30 -0.10 -5.94 16 13 O -0.52 3.98 16.04 5.32 0.09 4.07 16 14 C 0.00 0.00 6.83 -82.81 -0.57 -0.56 16 15 C -0.06 0.48 9.71 -38.87 -0.38 0.10 16 16 C -0.11 0.82 9.89 -38.93 -0.39 0.44 16 17 C 0.19 -1.10 5.60 -82.70 -0.46 -1.57 16 18 C -0.14 0.78 5.91 -103.18 -0.61 0.17 16 19 C 0.05 -0.31 6.33 -35.09 -0.22 -0.53 16 20 C -0.04 0.26 2.76 36.01 0.10 0.36 16 21 O -0.53 3.64 10.93 -35.23 -0.38 3.25 16 22 Si 0.70 -5.34 32.27 -169.99 -5.48 -10.82 16 23 O -0.16 1.04 9.18 6.98 0.06 1.11 16 24 C -0.01 0.11 12.04 29.34 0.35 0.46 16 25 C -0.20 1.45 11.10 -37.50 -0.42 1.04 16 26 N -0.22 1.18 10.57 33.37 0.35 1.53 16 27 N -0.21 1.46 10.73 33.33 0.36 1.82 16 28 C -0.13 2.72 5.49 -26.76 -0.15 2.58 16 29 C -0.14 3.70 5.43 -26.76 -0.15 3.55 16 30 H 0.09 -2.56 8.14 -51.93 -0.42 -2.98 16 31 H 0.10 -2.75 8.14 -51.93 -0.42 -3.17 16 32 H 0.09 -1.93 8.14 -51.93 -0.42 -2.35 16 33 H 0.08 -1.92 8.14 -51.93 -0.42 -2.34 16 34 H 0.42 -6.13 7.95 -40.82 -0.32 -6.46 16 35 H 0.16 -1.55 7.71 -52.49 -0.40 -1.96 16 36 H 0.16 -1.53 8.06 -52.49 -0.42 -1.96 16 37 H 0.10 -0.90 7.96 -51.93 -0.41 -1.32 16 38 H 0.39 -4.13 8.74 45.56 0.40 -3.74 16 39 H -0.25 1.55 7.11 56.52 0.40 1.95 16 40 H -0.25 0.94 7.11 56.52 0.40 1.35 16 41 H 0.22 -2.53 8.06 -52.49 -0.42 -2.96 16 42 H 0.16 -1.51 8.06 -52.49 -0.42 -1.93 16 43 H 0.08 -1.66 8.14 -51.93 -0.42 -2.08 16 44 H 0.09 -1.54 8.14 -51.93 -0.42 -1.96 16 45 H 0.09 -2.44 8.14 -51.93 -0.42 -2.86 16 46 H 0.09 -2.56 8.14 -51.93 -0.42 -2.98 16 LS Contribution 382.54 15.07 5.76 5.76 Total: 1.00 -43.76 382.54 -9.64 -53.40 By element: Atomic # 1 Polarization: -90.07 SS G_CDS: -6.46 Total: -96.53 kcal Atomic # 6 Polarization: 6.36 SS G_CDS: -3.64 Total: 2.73 kcal Atomic # 7 Polarization: 36.63 SS G_CDS: 0.41 Total: 37.04 kcal Atomic # 8 Polarization: 8.66 SS G_CDS: -0.24 Total: 8.42 kcal Atomic # 14 Polarization: -5.34 SS G_CDS: -5.48 Total: -10.82 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -43.76 -9.64 -53.40 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081500_17088014.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 179.661 kcal (2) G-P(sol) polarization free energy of solvation -43.757 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 135.904 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.640 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -53.397 kcal (6) G-S(sol) free energy of system = (1) + (5) 126.264 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds