Wall clock time and date at job start Mon Mar 8 2021 08:10:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00906 * 1 3 3 H 1.00894 * 109.46842 * 1 2 4 4 H 1.00897 * 109.47600 * 239.98912 * 1 2 3 5 5 C 1.46904 * 109.46758 * 119.99373 * 1 2 3 6 6 H 1.09003 * 109.47038 * 180.02562 * 5 1 2 7 7 C 1.53000 * 109.47313 * 300.00123 * 5 1 2 8 8 C 1.52995 * 109.47347 * 180.02562 * 7 5 1 9 9 C 1.53001 * 109.47129 * 299.99797 * 8 7 5 10 10 H 1.09003 * 109.47377 * 300.00380 * 9 8 7 11 11 N 1.46497 * 109.47574 * 179.97438 * 9 8 7 12 12 C 1.34772 * 120.00130 * 154.99778 * 11 9 8 13 13 O 1.21554 * 120.00136 * 0.02562 * 12 11 9 14 14 C 1.47886 * 119.99954 * 180.02562 * 12 11 9 15 15 C 1.39503 * 119.97852 * 180.02562 * 14 12 11 16 16 N 1.31941 * 120.01295 * 179.97438 * 15 14 12 17 17 C 1.33033 * 119.97291 * 0.02562 * 16 15 14 18 18 C 1.48021 * 120.02129 * 180.02562 * 17 16 15 19 19 C 1.36102 * 127.14831 * 46.54380 * 18 17 16 20 20 C 1.50696 * 125.78547 * 359.95637 * 19 18 17 21 21 O 1.42902 * 109.47161 * 37.23145 * 20 19 18 22 22 Si 1.86303 * 109.46927 * 157.22786 * 20 19 18 23 23 O 1.33918 * 108.42423 * 179.84116 * 19 18 17 24 24 C 1.34192 * 110.81186 * 0.44310 * 23 19 18 25 25 C 1.34290 * 109.05603 * 359.72750 * 24 23 19 26 26 C 1.40056 * 119.95924 * 359.97438 * 17 16 15 27 27 N 1.31496 * 119.98572 * 359.74405 * 26 17 16 28 28 C 1.53000 * 109.46841 * 59.99893 * 9 8 7 29 29 C 1.52993 * 109.47210 * 60.00068 * 5 1 2 30 30 H 1.08999 * 109.47453 * 59.99671 * 7 5 1 31 31 H 1.09009 * 109.46879 * 300.00259 * 7 5 1 32 32 H 1.09002 * 109.47371 * 179.97438 * 8 7 5 33 33 H 1.08994 * 109.47192 * 60.00003 * 8 7 5 34 34 H 0.97006 * 119.99825 * 335.00596 * 11 9 8 35 35 H 1.07997 * 119.99202 * 359.95561 * 15 14 12 36 36 H 1.09000 * 109.47489 * 277.23322 * 20 19 18 37 37 H 0.96703 * 114.00193 * 59.99946 * 21 20 19 38 38 H 1.48502 * 109.99898 * 180.02562 * 22 20 19 39 39 H 1.48494 * 110.00133 * 301.32207 * 22 20 19 40 40 H 1.07993 * 125.47333 * 179.75551 * 24 23 19 41 41 H 1.08000 * 127.00076 * 180.02562 * 25 24 23 42 42 H 1.07996 * 120.00928 * 180.02562 * 26 17 16 43 43 H 1.08999 * 109.47443 * 60.00089 * 28 9 8 44 44 H 1.09001 * 109.47016 * 180.02562 * 28 9 8 45 45 H 1.09002 * 109.47462 * 60.00039 * 29 5 1 46 46 H 1.08994 * 109.47371 * 299.99969 * 29 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0091 0.0000 0.0000 3 1 -0.3363 0.9513 0.0000 4 1 -0.3364 -0.4758 0.8237 5 6 -0.4896 -0.6924 -1.1996 6 1 -1.5796 -0.6920 -1.1998 7 6 0.0205 0.0290 -2.4487 8 6 -0.4900 -0.6918 -3.6980 9 6 0.0196 -2.1344 -3.6985 10 1 1.1096 -2.1348 -3.6986 11 7 -0.4696 -2.8248 -4.8944 12 6 0.2066 -3.8818 -5.3864 13 8 1.2222 -4.2625 -4.8375 14 6 -0.2869 -4.5783 -6.5940 15 6 0.4131 -5.6726 -7.1025 16 7 -0.0269 -6.2949 -8.1795 17 6 -1.1381 -5.8780 -8.7806 18 6 -1.6330 -6.5757 -9.9887 19 6 -1.7584 -7.9189 -10.1686 20 6 -1.4114 -8.9798 -9.1562 21 8 -1.7615 -8.5228 -7.8483 22 14 -2.3550 -10.5391 -9.5424 23 8 -2.2450 -8.1378 -11.3969 24 6 -2.4391 -6.9795 -12.0462 25 6 -2.0846 -5.9625 -11.2442 26 6 -1.8400 -4.7792 -8.2691 27 7 -1.4030 -4.1637 -7.1924 28 6 -0.4905 -2.8558 -2.4494 29 6 0.0204 -2.1348 -1.1997 30 1 1.1104 0.0290 -2.4487 31 1 -0.3429 1.0567 -2.4486 32 1 -0.1270 -0.1776 -4.5880 33 1 -1.5799 -0.6914 -3.6979 34 1 -1.2802 -2.5212 -5.3323 35 1 1.3155 -6.0103 -6.6147 36 1 -0.3413 -9.1834 -9.1955 37 1 -2.7012 -8.3219 -7.7403 38 1 -2.0219 -11.5931 -8.5507 39 1 -3.8147 -10.2673 -9.5233 40 1 -2.8197 -6.8811 -13.0521 41 1 -2.1241 -4.9082 -11.4753 42 1 -2.7423 -4.4404 -8.7562 43 1 -1.5805 -2.8555 -2.4491 44 1 -0.1271 -3.8835 -2.4494 45 1 -0.3430 -2.6488 -0.3098 46 1 1.1103 -2.1349 -1.1997 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081500_17088084.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:10:38 Heat of formation + Delta-G solvation = 115.487190 kcal Electronic energy + Delta-G solvation = -29998.813410 eV Core-core repulsion = 25782.797175 eV Total energy + Delta-G solvation = -4216.016235 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.160 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -44.27318 -43.55894 -42.95706 -41.45199 -39.22838 -38.85565 -36.63658 -35.77958 -35.19933 -33.97432 -33.04825 -32.19744 -31.15148 -28.22038 -26.65871 -26.43614 -26.12474 -25.39621 -23.65608 -23.34058 -22.92888 -21.99899 -21.43534 -21.20140 -20.22799 -19.92696 -19.86938 -19.53020 -18.48020 -18.34895 -18.05645 -17.73649 -17.55127 -17.45068 -17.12620 -16.79432 -16.52622 -16.40209 -16.24496 -16.03564 -15.74103 -15.54533 -15.25434 -15.02522 -14.78678 -14.57240 -14.51938 -14.47182 -14.22930 -14.18667 -13.60221 -13.52901 -13.50229 -13.24769 -13.12945 -12.63543 -12.43319 -12.00031 -11.53641 -11.40842 -11.00732 -10.91619 -10.12380 -5.52637 -1.64787 -1.20415 -0.77400 -0.10673 0.51954 0.55830 0.67922 0.68090 0.75908 0.84598 0.86253 0.99574 1.10446 1.35828 1.48301 1.58692 1.66932 1.88449 1.92110 1.98313 2.07063 2.16596 2.22152 2.37211 2.41548 2.45341 2.50809 2.60307 2.70788 2.85366 2.85676 2.89742 2.92143 3.05103 3.16437 3.21487 3.30228 3.45132 3.54539 3.64124 3.67387 3.71625 3.82111 3.95982 4.15114 4.25111 4.41789 4.60274 5.12057 5.25904 5.33275 5.57763 5.83567 6.00056 Molecular weight = 346.16amu Principal moments of inertia in cm(-1) A = 0.022721 B = 0.002255 C = 0.002144 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1232.059706 B =12415.223815 C =13056.787386 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.434 0.566 3 H 0.437 0.563 4 H 0.437 0.563 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.137 4.137 8 C -0.127 4.127 9 C 0.139 3.861 10 H 0.098 0.902 11 N -0.713 5.713 12 C 0.587 3.413 13 O -0.522 6.522 14 C 0.000 4.000 15 C 0.130 3.870 16 N -0.416 5.416 17 C 0.202 3.798 18 C -0.148 4.148 19 C 0.013 3.987 20 C -0.034 4.034 21 O -0.512 6.512 22 Si 0.709 3.291 23 O -0.164 6.164 24 C -0.014 4.014 25 C -0.196 4.196 26 C 0.062 3.938 27 N -0.410 5.410 28 C -0.132 4.132 29 C -0.139 4.139 30 H 0.093 0.907 31 H 0.095 0.905 32 H 0.094 0.906 33 H 0.084 0.916 34 H 0.414 0.586 35 H 0.183 0.817 36 H 0.142 0.858 37 H 0.374 0.626 38 H -0.247 1.247 39 H -0.257 1.257 40 H 0.215 0.785 41 H 0.159 0.841 42 H 0.178 0.822 43 H 0.079 0.921 44 H 0.092 0.908 45 H 0.093 0.907 46 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.148 23.833 25.417 34.843 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.263 0.737 3 H 0.265 0.735 4 H 0.266 0.734 5 C -0.080 4.080 6 H 0.161 0.839 7 C -0.176 4.176 8 C -0.166 4.166 9 C 0.034 3.966 10 H 0.116 0.884 11 N -0.365 5.365 12 C 0.372 3.628 13 O -0.397 6.397 14 C -0.139 4.139 15 C -0.031 4.031 16 N -0.129 5.129 17 C 0.061 3.939 18 C -0.151 4.151 19 C -0.039 4.039 20 C -0.143 4.143 21 O -0.318 6.318 22 Si 0.607 3.393 23 O -0.060 6.060 24 C -0.080 4.080 25 C -0.215 4.215 26 C -0.102 4.102 27 N -0.126 5.126 28 C -0.171 4.171 29 C -0.177 4.177 30 H 0.111 0.889 31 H 0.114 0.886 32 H 0.113 0.887 33 H 0.102 0.898 34 H 0.251 0.749 35 H 0.200 0.800 36 H 0.159 0.841 37 H 0.221 0.779 38 H -0.171 1.171 39 H -0.181 1.181 40 H 0.231 0.769 41 H 0.177 0.823 42 H 0.195 0.805 43 H 0.098 0.902 44 H 0.111 0.889 45 H 0.111 0.889 46 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 0.829 22.486 25.930 34.332 hybrid contribution -0.859 1.483 0.629 1.826 sum -0.030 23.969 26.559 35.776 Atomic orbital electron populations 1.42648 1.21351 1.20662 1.18699 0.73732 0.73466 0.73401 1.23593 1.04474 0.95881 0.84059 0.83856 1.22018 1.03342 1.00169 0.92037 1.21764 1.02547 0.94480 0.97769 1.21046 1.00760 0.90368 0.84380 0.88446 1.45748 1.29867 1.31774 1.29132 1.17603 0.82981 0.79783 0.82400 1.90851 1.24033 1.65159 1.59677 1.21909 0.95232 0.98393 0.98386 1.23822 0.98922 0.89711 0.90653 1.68738 1.10888 1.26551 1.06754 1.20150 0.90173 0.91443 0.92087 1.19327 1.09604 0.92042 0.94152 1.23149 0.99669 0.95275 0.85836 1.24428 1.08216 1.01364 0.80331 1.86721 1.30322 1.87256 1.27453 0.94240 0.79299 0.76336 0.89422 1.83800 1.64152 1.34366 1.23699 1.24095 1.03520 0.81411 0.98997 1.22793 1.05828 1.00725 0.92168 1.23755 1.00576 0.93264 0.92630 1.68217 1.10225 1.27057 1.07129 1.21955 1.02140 1.01300 0.91701 1.22054 1.03314 0.90549 1.01793 0.88889 0.88608 0.88701 0.89771 0.74874 0.80022 0.84061 0.77906 1.17069 1.18081 0.76864 0.82305 0.80461 0.90234 0.88940 0.88854 0.88937 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 23.81 4.15 -4.67 -0.02 23.79 16 2 H 0.43 -16.63 8.90 -39.29 -0.35 -16.98 16 3 H 0.44 -17.08 8.96 -39.29 -0.35 -17.44 16 4 H 0.44 -16.99 8.96 -39.29 -0.35 -17.35 16 5 C 0.02 -0.74 3.02 -67.71 -0.20 -0.95 16 6 H 0.14 -4.53 8.14 -51.93 -0.42 -4.95 16 7 C -0.14 3.81 5.43 -26.73 -0.15 3.66 16 8 C -0.13 2.85 5.39 -26.73 -0.14 2.71 16 9 C 0.14 -2.62 2.45 -67.93 -0.17 -2.79 16 10 H 0.10 -1.68 7.58 -51.93 -0.39 -2.07 16 11 N -0.71 10.37 5.07 -54.74 -0.28 10.09 16 12 C 0.59 -5.91 7.77 -12.31 -0.10 -6.01 16 13 O -0.52 3.94 15.99 5.32 0.09 4.03 16 14 C 0.00 0.00 6.75 -82.83 -0.56 -0.56 16 15 C 0.13 -0.90 10.76 -17.03 -0.18 -1.08 16 16 N -0.42 2.33 9.50 -9.27 -0.09 2.25 16 17 C 0.20 -1.39 5.54 -82.65 -0.46 -1.85 16 18 C -0.15 1.02 5.91 -103.18 -0.61 0.41 16 19 C 0.01 -0.09 6.29 -35.08 -0.22 -0.31 16 20 C -0.03 0.25 2.76 36.00 0.10 0.35 16 21 O -0.51 3.45 10.94 -35.23 -0.39 3.06 16 22 Si 0.71 -5.36 32.26 -169.99 -5.48 -10.84 16 23 O -0.16 1.18 9.18 7.03 0.06 1.25 16 24 C -0.01 0.12 12.04 29.34 0.35 0.48 16 25 C -0.20 1.66 11.10 -37.50 -0.42 1.24 16 26 C 0.06 -0.55 10.93 -17.01 -0.19 -0.73 16 27 N -0.41 3.71 9.69 -9.36 -0.09 3.62 16 28 C -0.13 2.71 5.49 -26.71 -0.15 2.57 16 29 C -0.14 3.70 5.43 -26.71 -0.15 3.55 16 30 H 0.09 -2.57 8.14 -51.93 -0.42 -2.99 16 31 H 0.10 -2.75 8.14 -51.92 -0.42 -3.17 16 32 H 0.09 -1.93 8.14 -51.93 -0.42 -2.35 16 33 H 0.08 -1.90 8.14 -51.93 -0.42 -2.33 16 34 H 0.41 -6.29 7.94 -40.82 -0.32 -6.62 16 35 H 0.18 -1.42 7.63 -52.49 -0.40 -1.82 16 36 H 0.14 -1.07 7.96 -51.93 -0.41 -1.48 16 37 H 0.37 -3.48 8.70 45.56 0.40 -3.08 16 38 H -0.25 1.15 7.11 56.52 0.40 1.55 16 39 H -0.26 1.34 7.11 56.52 0.40 1.75 16 40 H 0.21 -2.62 8.06 -52.49 -0.42 -3.05 16 41 H 0.16 -1.66 8.06 -52.49 -0.42 -2.09 16 42 H 0.18 -2.00 8.06 -52.49 -0.42 -2.43 16 43 H 0.08 -1.64 8.14 -51.93 -0.42 -2.06 16 44 H 0.09 -1.53 8.14 -51.93 -0.42 -1.96 16 45 H 0.09 -2.54 8.14 -51.93 -0.42 -2.97 16 46 H 0.09 -2.45 8.14 -51.93 -0.42 -2.87 16 LS Contribution 382.17 15.07 5.76 5.76 Total: 1.00 -42.93 382.17 -10.13 -53.05 By element: Atomic # 1 Polarization: -90.28 SS G_CDS: -6.46 Total: -96.74 kcal Atomic # 6 Polarization: 3.91 SS G_CDS: -3.23 Total: 0.69 kcal Atomic # 7 Polarization: 40.22 SS G_CDS: -0.48 Total: 39.75 kcal Atomic # 8 Polarization: 8.57 SS G_CDS: -0.24 Total: 8.34 kcal Atomic # 14 Polarization: -5.36 SS G_CDS: -5.48 Total: -10.84 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -42.93 -10.13 -53.05 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081500_17088084.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 168.538 kcal (2) G-P(sol) polarization free energy of solvation -42.926 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 125.613 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.125 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -53.051 kcal (6) G-S(sol) free energy of system = (1) + (5) 115.487 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds