Wall clock time and date at job start Mon Mar 8 2021 08:20:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00905 * 1 3 3 H 1.00898 * 109.47202 * 1 2 4 4 H 1.00901 * 109.47054 * 239.99200 * 1 2 3 5 5 C 1.46904 * 109.47029 * 119.99774 * 1 2 3 6 6 H 1.08994 * 109.47005 * 180.02562 * 5 1 2 7 7 C 1.53002 * 109.47031 * 300.00027 * 5 1 2 8 8 C 1.52994 * 109.47235 * 180.02562 * 7 5 1 9 9 C 1.52999 * 109.47309 * 299.99929 * 8 7 5 10 10 H 1.09004 * 109.47276 * 300.00033 * 9 8 7 11 11 N 1.46503 * 109.47304 * 179.97438 * 9 8 7 12 12 C 1.34779 * 119.99621 * 154.99990 * 11 9 8 13 13 O 1.21576 * 120.00309 * 0.02562 * 12 11 9 14 14 C 1.47608 * 119.99400 * 179.97438 * 12 11 9 15 15 C 1.40132 * 120.85417 * 359.72750 * 14 12 11 16 16 N 1.31920 * 119.02654 * 179.71053 * 15 14 12 17 17 C 1.32829 * 120.88355 * 0.57557 * 16 15 14 18 18 C 1.47939 * 119.06251 * 179.72231 * 17 16 15 19 19 C 1.36131 * 127.15716 * 226.78570 * 18 17 16 20 20 C 1.50701 * 125.78577 * 359.97438 * 19 18 17 21 21 O 1.42904 * 109.46970 * 37.23836 * 20 19 18 22 22 Si 1.86301 * 109.47199 * 157.23016 * 20 19 18 23 23 O 1.33856 * 108.42893 * 179.97438 * 19 18 17 24 24 C 1.34186 * 110.82672 * 0.02562 * 23 19 18 25 25 C 1.34266 * 109.06697 * 359.70502 * 24 23 19 26 26 N 1.32834 * 121.87914 * 359.69493 * 17 16 15 27 27 C 1.31914 * 120.87994 * 0.02562 * 26 17 16 28 28 C 1.53002 * 109.46914 * 59.99874 * 9 8 7 29 29 C 1.52994 * 109.47235 * 300.00171 * 28 9 8 30 30 H 1.08995 * 109.47273 * 300.00507 * 7 5 1 31 31 H 1.09004 * 109.47019 * 60.00245 * 7 5 1 32 32 H 1.08994 * 109.46965 * 60.00092 * 8 7 5 33 33 H 1.09006 * 109.47045 * 180.02562 * 8 7 5 34 34 H 0.96992 * 119.99901 * 335.00249 * 11 9 8 35 35 H 1.07996 * 120.48583 * 359.97438 * 15 14 12 36 36 H 1.08994 * 109.47712 * 277.23447 * 20 19 18 37 37 H 0.96696 * 114.00198 * 59.99392 * 21 20 19 38 38 H 1.48505 * 109.99786 * 58.68611 * 22 20 19 39 39 H 1.48495 * 110.00347 * 179.97438 * 22 20 19 40 40 H 1.08010 * 125.46633 * 180.02562 * 24 23 19 41 41 H 1.08001 * 127.00950 * 180.27045 * 25 24 23 42 42 H 1.07999 * 120.48237 * 179.97438 * 27 26 17 43 43 H 1.08999 * 109.47064 * 180.02562 * 28 9 8 44 44 H 1.09004 * 109.47019 * 60.00002 * 28 9 8 45 45 H 1.09004 * 109.47429 * 300.00142 * 29 28 9 46 46 H 1.09006 * 109.47505 * 179.97438 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0091 0.0000 0.0000 3 1 -0.3363 0.9513 0.0000 4 1 -0.3363 -0.4758 0.8238 5 6 -0.4897 -0.6925 -1.1995 6 1 -1.5796 -0.6921 -1.1997 7 6 0.0204 0.0289 -2.4487 8 6 -0.4901 -0.6919 -3.6980 9 6 0.0194 -2.1346 -3.6984 10 1 1.1094 -2.1350 -3.6986 11 7 -0.4699 -2.8250 -4.8944 12 6 0.2063 -3.8820 -5.3863 13 8 1.2220 -4.2628 -4.8373 14 6 -0.2871 -4.5779 -6.5909 15 6 -1.4593 -4.1582 -7.2339 16 7 -1.8643 -4.8027 -8.3113 17 6 -1.1833 -5.8424 -8.7801 18 6 -1.6774 -6.5395 -9.9878 19 6 -1.8060 -7.8829 -10.1670 20 6 -1.4640 -8.9439 -9.1529 21 8 -1.8160 -8.4850 -7.8461 22 14 -2.4107 -10.5011 -9.5400 23 8 -2.2877 -8.1016 -11.3966 24 6 -2.4843 -6.9433 -12.0449 25 6 -2.1369 -5.9260 -11.2405 26 7 -0.0711 -6.2737 -8.1958 27 6 0.4016 -5.6789 -7.1174 28 6 -0.4906 -2.8559 -2.4492 29 6 0.0198 -2.1351 -1.2000 30 1 -0.3429 1.0565 -2.4486 31 1 1.1104 0.0288 -2.4487 32 1 -1.5800 -0.6915 -3.6978 33 1 -0.1263 -0.1782 -4.5879 34 1 -1.2804 -2.5213 -5.3321 35 1 -2.0206 -3.3168 -6.8554 36 1 -0.3944 -9.1504 -9.1896 37 1 -2.7554 -8.2815 -7.7406 38 1 -2.0774 -10.9710 -10.9087 39 1 -2.0817 -11.5555 -8.5475 40 1 -2.8662 -6.8450 -13.0504 41 1 -2.1834 -4.8714 -11.4691 42 1 1.3062 -6.0353 -6.6472 43 1 -0.1273 -3.8836 -2.4493 44 1 -1.5807 -2.8555 -2.4490 45 1 1.1098 -2.1355 -1.2001 46 1 -0.3439 -2.6488 -0.3099 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081500_17119452.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:20:13 Heat of formation + Delta-G solvation = 119.391680 kcal Electronic energy + Delta-G solvation = -30005.398377 eV Core-core repulsion = 25789.551453 eV Total energy + Delta-G solvation = -4215.846924 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.160 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -44.22429 -43.60709 -42.92462 -41.51452 -39.26986 -38.71342 -36.33909 -35.55158 -35.39124 -34.02560 -33.41449 -32.23076 -31.14185 -28.14700 -26.63094 -26.42393 -26.17620 -25.40330 -23.65320 -23.41373 -22.93398 -22.02906 -21.45596 -21.23105 -20.20067 -19.97632 -19.86528 -19.61462 -18.44238 -18.34801 -18.02642 -17.77635 -17.66329 -17.31088 -17.09903 -16.69103 -16.57206 -16.32175 -16.16878 -16.10323 -15.62143 -15.44750 -15.30855 -15.12230 -14.83101 -14.71580 -14.60329 -14.54995 -14.24340 -14.11022 -13.60169 -13.50080 -13.46153 -13.30207 -12.74752 -12.62282 -12.07316 -12.04838 -11.51812 -11.35603 -11.09647 -11.01287 -10.13022 -5.59115 -1.62945 -1.23591 -0.74993 -0.07097 0.59035 0.60779 0.62149 0.64540 0.71277 0.81537 0.89903 0.97827 1.25342 1.42666 1.44675 1.55164 1.63265 1.85230 1.92388 1.93146 2.02183 2.17000 2.30354 2.31149 2.37289 2.42653 2.53538 2.57121 2.63279 2.71452 2.80711 2.86770 2.96142 2.98038 3.10222 3.19066 3.23984 3.44240 3.49285 3.58865 3.71215 3.73534 3.88942 4.02662 4.06456 4.29655 4.40471 4.67209 5.02024 5.12727 5.35360 5.72665 5.92730 6.18632 Molecular weight = 346.16amu Principal moments of inertia in cm(-1) A = 0.022806 B = 0.002256 C = 0.002145 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1227.455123 B =12408.752244 C =13052.680753 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.434 0.566 3 H 0.437 0.563 4 H 0.438 0.562 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.138 4.138 8 C -0.128 4.128 9 C 0.141 3.859 10 H 0.098 0.902 11 N -0.727 5.727 12 C 0.581 3.419 13 O -0.523 6.523 14 C -0.266 4.266 15 C 0.190 3.810 16 N -0.509 5.509 17 C 0.435 3.565 18 C -0.132 4.132 19 C 0.016 3.984 20 C -0.027 4.027 21 O -0.523 6.523 22 Si 0.704 3.296 23 O -0.166 6.166 24 C -0.021 4.021 25 C -0.178 4.178 26 N -0.492 5.492 27 C 0.223 3.777 28 C -0.132 4.132 29 C -0.139 4.139 30 H 0.096 0.904 31 H 0.093 0.907 32 H 0.084 0.916 33 H 0.094 0.906 34 H 0.403 0.597 35 H 0.169 0.831 36 H 0.139 0.861 37 H 0.377 0.623 38 H -0.247 1.247 39 H -0.245 1.245 40 H 0.215 0.785 41 H 0.159 0.841 42 H 0.182 0.818 43 H 0.093 0.907 44 H 0.079 0.921 45 H 0.092 0.908 46 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.170 25.497 28.829 38.504 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.263 0.737 3 H 0.266 0.734 4 H 0.266 0.734 5 C -0.080 4.080 6 H 0.161 0.839 7 C -0.176 4.176 8 C -0.166 4.166 9 C 0.037 3.963 10 H 0.116 0.884 11 N -0.380 5.380 12 C 0.367 3.633 13 O -0.399 6.399 14 C -0.274 4.274 15 C 0.020 3.980 16 N -0.222 5.222 17 C 0.173 3.827 18 C -0.135 4.135 19 C -0.038 4.038 20 C -0.137 4.137 21 O -0.327 6.327 22 Si 0.602 3.398 23 O -0.062 6.062 24 C -0.087 4.087 25 C -0.198 4.198 26 N -0.204 5.204 27 C 0.055 3.945 28 C -0.171 4.171 29 C -0.178 4.178 30 H 0.114 0.886 31 H 0.111 0.889 32 H 0.102 0.898 33 H 0.113 0.887 34 H 0.239 0.761 35 H 0.185 0.815 36 H 0.156 0.844 37 H 0.224 0.776 38 H -0.170 1.170 39 H -0.169 1.169 40 H 0.231 0.769 41 H 0.177 0.823 42 H 0.199 0.801 43 H 0.111 0.889 44 H 0.098 0.902 45 H 0.110 0.890 46 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -0.218 23.385 27.933 36.430 hybrid contribution 0.503 1.645 0.730 1.869 sum 0.285 25.029 28.664 38.055 Atomic orbital electron populations 1.42646 1.21366 1.20674 1.18699 0.73721 0.73448 0.73374 1.23588 1.04466 0.95880 0.84067 0.83851 1.22015 1.03373 1.00189 0.92033 1.21776 1.02485 0.94516 0.97854 1.21021 1.00837 0.90243 0.84245 0.88395 1.45810 1.29742 1.32581 1.29856 1.17766 0.83099 0.79482 0.82920 1.90843 1.24095 1.64890 1.60116 1.21608 1.01508 1.03206 1.01099 1.23324 0.90568 0.95370 0.88692 1.68510 1.32565 1.08545 1.12621 1.20480 0.85491 0.86349 0.90417 1.18908 1.09718 0.91548 0.93341 1.23161 0.99709 0.95117 0.85824 1.24535 1.06414 1.01768 0.81012 1.86596 1.30883 1.88597 1.26665 0.94464 0.89176 0.74968 0.81146 1.83813 1.64319 1.34477 1.23578 1.24065 1.04217 0.81311 0.99101 1.22749 1.04537 1.00673 0.91854 1.68641 1.12638 1.29719 1.09416 1.23515 0.96473 0.86750 0.87790 1.21944 1.02105 1.01348 0.91696 1.22050 1.03335 0.90542 1.01827 0.88591 0.88887 0.89774 0.88696 0.76103 0.81451 0.84379 0.77552 1.17046 1.16937 0.76872 0.82346 0.80127 0.88891 0.90224 0.88956 0.88828 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.17 4.16 -4.67 -0.02 24.15 16 2 H 0.43 -16.84 8.90 -39.29 -0.35 -17.19 16 3 H 0.44 -17.32 8.96 -39.29 -0.35 -17.67 16 4 H 0.44 -17.23 8.96 -39.29 -0.35 -17.58 16 5 C 0.02 -0.76 3.02 -67.71 -0.20 -0.97 16 6 H 0.14 -4.65 8.14 -51.93 -0.42 -5.08 16 7 C -0.14 3.94 5.43 -26.73 -0.15 3.79 16 8 C -0.13 3.04 5.39 -26.73 -0.14 2.90 16 9 C 0.14 -2.86 2.45 -67.93 -0.17 -3.02 16 10 H 0.10 -1.78 7.58 -51.93 -0.39 -2.18 16 11 N -0.73 12.25 5.03 -54.82 -0.28 11.98 16 12 C 0.58 -6.86 7.74 -12.44 -0.10 -6.96 16 13 O -0.52 4.40 16.10 5.30 0.09 4.49 16 14 C -0.27 2.70 5.91 -104.65 -0.62 2.08 16 15 C 0.19 -2.05 10.80 -16.80 -0.18 -2.23 16 16 N -0.51 3.67 10.34 -10.85 -0.11 3.55 16 17 C 0.43 -2.39 6.38 -156.70 -1.00 -3.39 16 18 C -0.13 0.69 6.05 -103.19 -0.62 0.07 16 19 C 0.02 -0.09 6.29 -35.06 -0.22 -0.31 16 20 C -0.03 0.18 2.73 36.01 0.10 0.28 16 21 O -0.52 3.72 10.94 -35.23 -0.39 3.34 16 22 Si 0.70 -5.11 32.26 -169.99 -5.48 -10.60 16 23 O -0.17 0.96 9.18 7.21 0.07 1.02 16 24 C -0.02 0.16 12.04 29.33 0.35 0.51 16 25 C -0.18 1.16 11.15 -37.49 -0.42 0.74 16 26 N -0.49 2.58 9.34 -10.85 -0.10 2.48 16 27 C 0.22 -1.66 10.87 -16.81 -0.18 -1.84 16 28 C -0.13 2.86 5.49 -26.73 -0.15 2.72 16 29 C -0.14 3.82 5.43 -26.73 -0.15 3.67 16 30 H 0.10 -2.82 8.14 -51.93 -0.42 -3.25 16 31 H 0.09 -2.64 8.14 -51.93 -0.42 -3.06 16 32 H 0.08 -2.04 8.14 -51.93 -0.42 -2.46 16 33 H 0.09 -2.06 8.14 -51.93 -0.42 -2.49 16 34 H 0.40 -7.62 6.72 -40.82 -0.27 -7.89 16 35 H 0.17 -2.60 6.52 -52.49 -0.34 -2.95 16 36 H 0.14 -0.86 7.96 -51.93 -0.41 -1.27 16 37 H 0.38 -3.92 8.70 45.56 0.40 -3.53 16 38 H -0.25 1.03 7.11 56.52 0.40 1.43 16 39 H -0.25 1.12 7.11 56.52 0.40 1.52 16 40 H 0.21 -2.34 8.06 -52.48 -0.42 -2.76 16 41 H 0.16 -1.25 8.06 -52.49 -0.42 -1.67 16 42 H 0.18 -1.51 7.74 -52.49 -0.41 -1.91 16 43 H 0.09 -1.63 8.14 -51.93 -0.42 -2.06 16 44 H 0.08 -1.75 8.14 -51.93 -0.42 -2.17 16 45 H 0.09 -2.50 8.14 -51.93 -0.42 -2.92 16 46 H 0.09 -2.61 8.14 -51.93 -0.42 -3.04 16 LS Contribution 380.19 15.07 5.73 5.73 Total: 1.00 -45.33 380.19 -10.68 -56.01 By element: Atomic # 1 Polarization: -93.84 SS G_CDS: -6.34 Total: -100.17 kcal Atomic # 6 Polarization: 1.87 SS G_CDS: -3.84 Total: -1.97 kcal Atomic # 7 Polarization: 42.67 SS G_CDS: -0.51 Total: 42.16 kcal Atomic # 8 Polarization: 9.08 SS G_CDS: -0.23 Total: 8.85 kcal Atomic # 14 Polarization: -5.11 SS G_CDS: -5.48 Total: -10.60 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -45.33 -10.68 -56.01 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081500_17119452.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 175.398 kcal (2) G-P(sol) polarization free energy of solvation -45.330 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 130.068 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.676 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -56.007 kcal (6) G-S(sol) free energy of system = (1) + (5) 119.392 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds