Wall clock time and date at job start Mon Mar 8 2021 08:24:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00898 * 1 3 3 H 1.00905 * 109.47393 * 1 2 4 4 H 1.00900 * 109.47462 * 240.00349 * 1 2 3 5 5 C 1.46898 * 109.47901 * 119.99856 * 1 2 3 6 6 H 1.08998 * 109.47563 * 179.97438 * 5 1 2 7 7 C 1.53001 * 109.47164 * 300.00539 * 5 1 2 8 8 C 1.53001 * 109.47225 * 179.97438 * 7 5 1 9 9 C 1.53002 * 109.46761 * 299.99472 * 8 7 5 10 10 H 1.08998 * 109.47241 * 300.00142 * 9 8 7 11 11 N 1.46500 * 109.46817 * 180.02562 * 9 8 7 12 12 C 1.34782 * 119.99940 * 85.00546 * 11 9 8 13 13 O 1.21587 * 119.99852 * 359.97438 * 12 11 9 14 14 C 1.47610 * 119.99676 * 180.02562 * 12 11 9 15 15 C 1.40265 * 120.45188 * 179.97438 * 14 12 11 16 16 C 1.37958 * 118.39464 * 180.02562 * 15 14 12 17 17 C 1.39583 * 119.22036 * 359.97438 * 16 15 14 18 18 C 1.48068 * 119.57606 * 179.97438 * 17 16 15 19 19 C 1.36062 * 127.14385 * 185.49893 * 18 17 16 20 20 C 1.50700 * 125.77851 * 0.03677 * 19 18 17 21 21 O 1.42901 * 109.46814 * 114.63280 * 20 19 18 22 22 Si 1.86306 * 109.47071 * 234.62859 * 20 19 18 23 23 O 1.33921 * 108.43131 * 179.77905 * 19 18 17 24 24 C 1.34182 * 110.81102 * 0.22373 * 23 19 18 25 25 C 1.34302 * 109.04385 * 0.02562 * 24 23 19 26 26 N 1.32863 * 120.84742 * 0.25861 * 17 16 15 27 27 C 1.31502 * 121.75882 * 359.47499 * 26 17 16 28 28 C 1.52996 * 109.46993 * 59.99999 * 9 8 7 29 29 C 1.52999 * 109.47604 * 299.99929 * 28 9 8 30 30 H 1.09003 * 109.46617 * 299.99292 * 7 5 1 31 31 H 1.08998 * 109.47326 * 59.99309 * 7 5 1 32 32 H 1.09003 * 109.47045 * 179.97438 * 8 7 5 33 33 H 1.08998 * 109.47359 * 59.99542 * 8 7 5 34 34 H 0.96998 * 120.00320 * 264.99532 * 11 9 8 35 35 H 1.08002 * 120.79810 * 0.03931 * 15 14 12 36 36 H 1.07995 * 120.38839 * 179.97438 * 16 15 14 37 37 H 1.08996 * 109.47712 * 354.62924 * 20 19 18 38 38 H 0.96698 * 114.00054 * 59.99553 * 21 20 19 39 39 H 1.48504 * 109.99554 * 58.68419 * 22 20 19 40 40 H 1.48496 * 109.99884 * 180.02562 * 22 20 19 41 41 H 1.07999 * 125.48099 * 180.02562 * 24 23 19 42 42 H 1.07996 * 127.00153 * 179.97438 * 25 24 23 43 43 H 1.07997 * 119.66010 * 180.29480 * 27 26 17 44 44 H 1.09008 * 109.47127 * 59.99977 * 28 9 8 45 45 H 1.09000 * 109.47135 * 179.97438 * 28 9 8 46 46 H 1.08999 * 109.46812 * 180.02562 * 29 28 9 47 47 H 1.08998 * 109.46996 * 300.00081 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9513 0.0000 4 1 -0.3364 -0.4756 0.8239 5 6 -0.4898 -0.6924 -1.1994 6 1 -1.5798 -0.6928 -1.1991 7 6 0.0202 0.0287 -2.4487 8 6 -0.4895 -0.6928 -3.6979 9 6 0.0210 -2.1351 -3.6976 10 1 1.1110 -2.1348 -3.6974 11 7 -0.4665 -2.8259 -4.8940 12 6 0.2110 -2.7230 -6.0547 13 8 1.2264 -2.0565 -6.1087 14 6 -0.2806 -3.4185 -7.2603 15 6 0.4166 -3.3175 -8.4732 16 6 -0.0810 -3.9845 -9.5734 17 6 -1.2525 -4.7325 -9.4445 18 6 -1.7939 -5.4512 -10.6205 19 6 -2.9682 -6.1341 -10.6969 20 6 -3.9675 -6.2961 -9.5806 21 8 -5.1828 -5.6298 -9.9289 22 14 -4.3081 -8.1076 -9.3101 23 8 -3.0881 -6.6330 -11.9340 24 6 -2.0248 -6.3068 -12.6847 25 6 -1.1734 -5.5776 -11.9451 26 7 -1.8909 -4.8035 -8.2815 27 6 -1.4460 -4.1864 -7.2089 28 6 -0.4889 -2.8563 -2.4483 29 6 0.0206 -2.1348 -1.1991 30 1 -0.3432 1.0564 -2.4486 31 1 1.1101 0.0287 -2.4487 32 1 -0.1265 -0.1787 -4.5879 33 1 -1.5795 -0.6931 -3.6980 34 1 -1.2768 -3.3574 -4.8509 35 1 1.3213 -2.7319 -8.5439 36 1 0.4297 -3.9286 -10.5233 37 1 -3.5642 -5.8617 -8.6659 38 1 -5.5984 -5.9654 -10.7349 39 1 -3.0466 -8.8175 -8.9785 40 1 -5.2927 -8.2808 -8.2120 41 1 -1.8774 -6.5859 -13.7175 42 1 -0.2269 -5.1648 -12.2615 43 1 -1.9896 -4.2710 -6.2795 44 1 -1.5790 -2.8566 -2.4484 45 1 -0.1257 -3.8840 -2.4483 46 1 -0.3423 -2.6489 -0.3091 47 1 1.1106 -2.1344 -1.1989 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081500_17119696.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:24:07 Heat of formation + Delta-G solvation = 99.729814 kcal Electronic energy + Delta-G solvation = -29730.273862 eV Core-core repulsion = 25579.000247 eV Total energy + Delta-G solvation = -4151.273615 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.165 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -44.20275 -43.58215 -42.50516 -41.18494 -39.23023 -38.45765 -36.20067 -35.50086 -34.48966 -34.01138 -32.92273 -32.13242 -30.97105 -27.71122 -26.53813 -26.15625 -25.66528 -25.12381 -23.58517 -23.40075 -22.59419 -21.88895 -21.43865 -21.22257 -20.17002 -19.89330 -19.63995 -19.08944 -18.50130 -18.03149 -17.74928 -17.63129 -17.39154 -17.28720 -16.97921 -16.67294 -16.42085 -16.26822 -16.18089 -15.83001 -15.52828 -15.44098 -15.26997 -15.08239 -14.81311 -14.77367 -14.57186 -14.52673 -14.23259 -14.12693 -14.02183 -13.55061 -13.39279 -13.28239 -12.68334 -12.31732 -12.20205 -11.82040 -11.54756 -11.47393 -11.10242 -10.76881 -9.89609 -5.57411 -1.55694 -1.22858 -0.67474 -0.01688 0.54891 0.65030 0.65403 0.65852 0.73391 0.83253 1.01286 1.12759 1.17494 1.35962 1.45686 1.56010 1.64452 1.92182 1.99775 2.05002 2.06245 2.18825 2.32883 2.37501 2.47002 2.63994 2.66598 2.73452 2.81405 2.82110 2.85049 2.88750 2.93657 3.02551 3.11811 3.25430 3.34168 3.42846 3.49802 3.60502 3.64763 3.79161 3.89902 4.05564 4.05644 4.10872 4.19215 4.40093 4.64409 4.71003 5.16951 5.39849 5.87493 5.88841 5.99721 Molecular weight = 345.16amu Principal moments of inertia in cm(-1) A = 0.017558 B = 0.002394 C = 0.002194 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1594.324534 B =11692.635902 C =12758.150300 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.434 0.566 3 H 0.437 0.563 4 H 0.437 0.563 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.139 4.139 8 C -0.132 4.132 9 C 0.141 3.859 10 H 0.097 0.903 11 N -0.728 5.728 12 C 0.575 3.425 13 O -0.528 6.528 14 C -0.211 4.211 15 C -0.003 4.003 16 C -0.165 4.165 17 C 0.244 3.756 18 C -0.158 4.158 19 C 0.026 3.974 20 C -0.042 4.042 21 O -0.532 6.532 22 Si 0.698 3.302 23 O -0.169 6.169 24 C -0.018 4.018 25 C -0.195 4.195 26 N -0.494 5.494 27 C 0.150 3.850 28 C -0.128 4.128 29 C -0.138 4.138 30 H 0.093 0.907 31 H 0.092 0.908 32 H 0.092 0.908 33 H 0.079 0.921 34 H 0.403 0.597 35 H 0.152 0.848 36 H 0.149 0.851 37 H 0.167 0.833 38 H 0.382 0.618 39 H -0.255 1.255 40 H -0.244 1.244 41 H 0.214 0.786 42 H 0.160 0.840 43 H 0.158 0.842 44 H 0.083 0.917 45 H 0.094 0.906 46 H 0.096 0.904 47 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.415 15.203 29.864 33.800 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.263 0.737 3 H 0.266 0.734 4 H 0.265 0.735 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.177 4.177 8 C -0.171 4.171 9 C 0.036 3.964 10 H 0.115 0.885 11 N -0.381 5.381 12 C 0.362 3.638 13 O -0.404 6.404 14 C -0.216 4.216 15 C -0.029 4.029 16 C -0.185 4.185 17 C 0.110 3.890 18 C -0.161 4.161 19 C -0.027 4.027 20 C -0.151 4.151 21 O -0.337 6.337 22 Si 0.597 3.403 23 O -0.065 6.065 24 C -0.084 4.084 25 C -0.214 4.214 26 N -0.203 5.203 27 C -0.010 4.010 28 C -0.167 4.167 29 C -0.176 4.176 30 H 0.112 0.888 31 H 0.110 0.890 32 H 0.111 0.889 33 H 0.098 0.902 34 H 0.240 0.760 35 H 0.170 0.830 36 H 0.166 0.834 37 H 0.183 0.817 38 H 0.230 0.770 39 H -0.179 1.179 40 H -0.168 1.168 41 H 0.231 0.769 42 H 0.177 0.823 43 H 0.176 0.824 44 H 0.102 0.898 45 H 0.113 0.887 46 H 0.114 0.886 47 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 4.229 14.558 30.654 34.198 hybrid contribution 1.112 1.087 0.205 1.569 sum 5.341 15.645 30.859 35.008 Atomic orbital electron populations 1.42646 1.21350 1.20750 1.18624 0.73731 0.73379 0.73451 1.23589 1.04473 0.95736 0.84193 0.83837 1.22047 1.03304 1.00236 0.92142 1.21944 1.02121 0.95604 0.97431 1.21005 1.00788 0.90706 0.83864 0.88476 1.45844 1.29806 1.53084 1.09355 1.18003 0.83051 0.80063 0.82643 1.90827 1.24271 1.40569 1.84748 1.20774 1.00072 1.05364 0.95424 1.21685 0.97808 0.93199 0.90168 1.22034 0.97125 0.98773 1.00559 1.19135 0.89725 0.90517 0.89629 1.19597 0.97115 1.05773 0.93569 1.23352 0.97644 0.96322 0.85417 1.25357 0.83083 1.11444 0.95264 1.86565 1.35754 1.62870 1.48531 0.94613 0.83094 0.74090 0.88529 1.83804 1.41496 1.60732 1.20425 1.24067 0.85643 1.01050 0.97684 1.22795 1.02296 1.04554 0.91804 1.67359 1.32154 1.21810 0.99023 1.22794 0.91545 0.90128 0.96511 1.21778 1.02498 1.00857 0.91522 1.22013 1.03350 0.90799 1.01425 0.88835 0.88979 0.88942 0.90235 0.76049 0.83013 0.83372 0.81684 0.77023 1.17887 1.16752 0.76907 0.82283 0.82448 0.89792 0.88715 0.88595 0.88902 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 23.93 4.15 -4.67 -0.02 23.91 16 2 H 0.43 -16.70 8.90 -39.29 -0.35 -17.05 16 3 H 0.44 -17.07 8.96 -39.29 -0.35 -17.42 16 4 H 0.44 -17.16 8.96 -39.29 -0.35 -17.51 16 5 C 0.02 -0.76 3.03 -67.71 -0.20 -0.96 16 6 H 0.14 -4.58 8.14 -51.93 -0.42 -5.00 16 7 C -0.14 3.74 5.43 -26.73 -0.15 3.60 16 8 C -0.13 2.78 5.49 -26.73 -0.15 2.63 16 9 C 0.14 -2.75 2.45 -67.93 -0.17 -2.92 16 10 H 0.10 -1.70 7.57 -51.93 -0.39 -2.10 16 11 N -0.73 11.60 5.03 -54.82 -0.28 11.33 16 12 C 0.57 -6.35 7.74 -12.43 -0.10 -6.44 16 13 O -0.53 4.07 16.07 5.29 0.09 4.16 16 14 C -0.21 2.05 5.89 -104.78 -0.62 1.43 16 15 C 0.00 0.02 9.70 -38.92 -0.38 -0.35 16 16 C -0.17 1.30 9.63 -39.18 -0.38 0.93 16 17 C 0.24 -1.50 6.75 -82.89 -0.56 -2.06 16 18 C -0.16 0.87 6.26 -103.18 -0.65 0.23 16 19 C 0.03 -0.14 5.60 -35.09 -0.20 -0.34 16 20 C -0.04 0.26 2.92 36.01 0.11 0.37 16 21 O -0.53 3.29 12.88 -35.23 -0.45 2.83 16 22 Si 0.70 -4.97 32.88 -169.99 -5.59 -10.56 16 23 O -0.17 1.09 10.09 7.05 0.07 1.16 16 24 C -0.02 0.15 12.04 29.34 0.35 0.50 16 25 C -0.19 1.42 10.52 -37.50 -0.39 1.03 16 26 N -0.49 3.40 7.42 -9.46 -0.07 3.33 16 27 C 0.15 -1.51 10.70 -17.16 -0.18 -1.69 16 28 C -0.13 2.96 5.39 -26.73 -0.14 2.81 16 29 C -0.14 3.86 5.43 -26.73 -0.15 3.72 16 30 H 0.09 -2.57 8.14 -51.93 -0.42 -2.99 16 31 H 0.09 -2.45 8.14 -51.93 -0.42 -2.88 16 32 H 0.09 -1.56 8.14 -51.93 -0.42 -1.99 16 33 H 0.08 -1.69 8.14 -51.93 -0.42 -2.11 16 34 H 0.40 -7.18 6.65 -40.82 -0.27 -7.45 16 35 H 0.15 -1.41 7.73 -52.49 -0.41 -1.81 16 36 H 0.15 -1.43 7.25 -52.49 -0.38 -1.81 16 37 H 0.17 -0.97 5.02 -51.93 -0.26 -1.24 16 38 H 0.38 -3.75 8.70 45.56 0.40 -3.35 16 39 H -0.25 1.11 7.11 56.52 0.40 1.51 16 40 H -0.24 1.23 7.11 56.52 0.40 1.63 16 41 H 0.21 -2.45 8.06 -52.49 -0.42 -2.87 16 42 H 0.16 -1.52 7.60 -52.49 -0.40 -1.92 16 43 H 0.16 -2.24 6.40 -52.49 -0.34 -2.58 16 44 H 0.08 -1.97 8.14 -51.92 -0.42 -2.39 16 45 H 0.09 -2.00 8.14 -51.93 -0.42 -2.42 16 46 H 0.10 -2.78 8.14 -51.93 -0.42 -3.20 16 47 H 0.09 -2.59 8.14 -51.93 -0.42 -3.01 16 LS Contribution 382.80 15.07 5.77 5.77 Total: 1.00 -44.60 382.80 -10.96 -55.56 By element: Atomic # 1 Polarization: -93.43 SS G_CDS: -6.53 Total: -99.96 kcal Atomic # 6 Polarization: 6.41 SS G_CDS: -3.94 Total: 2.47 kcal Atomic # 7 Polarization: 38.93 SS G_CDS: -0.37 Total: 38.57 kcal Atomic # 8 Polarization: 8.45 SS G_CDS: -0.30 Total: 8.15 kcal Atomic # 14 Polarization: -4.97 SS G_CDS: -5.59 Total: -10.56 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -44.60 -10.96 -55.56 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081500_17119696.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 155.288 kcal (2) G-P(sol) polarization free energy of solvation -44.603 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 110.685 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.955 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -55.558 kcal (6) G-S(sol) free energy of system = (1) + (5) 99.730 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds