Wall clock time and date at job start Mon Mar 8 2021 08:36:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00896 * 1 3 3 H 1.00895 * 109.47393 * 1 2 4 4 H 1.00895 * 109.47359 * 239.99235 * 1 2 3 5 5 C 1.46899 * 109.46913 * 119.99544 * 1 2 3 6 6 H 1.08998 * 109.47530 * 179.97438 * 5 1 2 7 7 C 1.53000 * 109.47424 * 299.99972 * 5 1 2 8 8 C 1.52994 * 109.47489 * 179.97438 * 7 5 1 9 9 C 1.53002 * 109.47549 * 300.00443 * 8 7 5 10 10 H 1.08998 * 109.46394 * 299.99808 * 9 8 7 11 11 N 1.46503 * 109.47251 * 179.97438 * 9 8 7 12 12 C 1.38542 * 119.99777 * 84.99869 * 11 9 8 13 13 C 1.39695 * 120.48107 * 0.02562 * 12 11 9 14 14 C 1.38205 * 118.53248 * 180.02562 * 13 12 11 15 15 N 1.32402 * 119.30815 * 359.97438 * 14 13 12 16 16 C 1.32707 * 120.91932 * 0.02562 * 15 14 13 17 17 C 1.48049 * 119.20127 * 179.97438 * 16 15 14 18 18 C 1.34566 * 122.86589 * 132.05700 * 17 16 15 19 19 C 1.50690 * 124.74638 * 359.96602 * 18 17 16 20 20 O 1.42906 * 109.47220 * 321.60825 * 19 18 17 21 21 Si 1.86298 * 109.47345 * 201.60926 * 19 18 17 22 22 S 1.70635 * 110.50811 * 179.70127 * 18 17 16 23 23 C 1.75733 * 91.70496 * 0.26527 * 22 18 17 24 24 C 1.33115 * 109.77899 * 359.97438 * 23 22 18 25 25 N 1.32675 * 121.59948 * 0.27630 * 16 15 14 26 26 C 1.53000 * 109.47087 * 59.99311 * 9 8 7 27 27 C 1.52997 * 109.47137 * 300.00646 * 26 9 8 28 28 H 1.08995 * 109.46976 * 299.99990 * 7 5 1 29 29 H 1.09006 * 109.46832 * 59.99605 * 7 5 1 30 30 H 1.08999 * 109.47215 * 179.97438 * 8 7 5 31 31 H 1.09006 * 109.47024 * 60.00191 * 8 7 5 32 32 H 0.97002 * 119.99995 * 265.00086 * 11 9 8 33 33 H 1.08001 * 120.73504 * 0.04168 * 13 12 11 34 34 H 1.08001 * 120.34690 * 179.97438 * 14 13 12 35 35 H 1.09005 * 109.47315 * 81.60925 * 19 18 17 36 36 H 0.96700 * 113.99730 * 179.97438 * 20 19 18 37 37 H 1.48501 * 110.00173 * 59.99628 * 21 19 18 38 38 H 1.48499 * 110.00431 * 181.31910 * 21 19 18 39 39 H 1.08001 * 125.11635 * 179.97438 * 23 22 18 40 40 H 1.07999 * 123.13620 * 180.02562 * 24 23 22 41 41 H 1.09006 * 109.46832 * 60.00653 * 26 9 8 42 42 H 1.08995 * 109.46976 * 180.02562 * 26 9 8 43 43 H 1.09007 * 109.46561 * 180.02562 * 27 26 9 44 44 H 1.08999 * 109.47240 * 299.99344 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9512 0.0000 4 1 -0.3364 -0.4757 0.8237 5 6 -0.4896 -0.6924 -1.1995 6 1 -1.5796 -0.6929 -1.1994 7 6 0.0204 0.0289 -2.4487 8 6 -0.4890 -0.6926 -3.6980 9 6 0.0214 -2.1350 -3.6978 10 1 1.1114 -2.1345 -3.6976 11 7 -0.4669 -2.8260 -4.8938 12 6 0.2286 -2.7203 -6.0873 13 6 1.3969 -1.9580 -6.1616 14 6 2.0583 -1.8799 -7.3725 15 7 1.5701 -2.5253 -8.4205 16 6 0.4580 -3.2426 -8.3222 17 6 -0.0544 -3.9484 -9.5184 18 6 -0.4338 -5.2393 -9.4980 19 6 -0.3905 -6.1281 -8.2819 20 8 0.7858 -5.8402 -7.5231 21 14 -0.3630 -7.9123 -8.8172 22 16 -0.9775 -5.7271 -11.0401 23 6 -0.6673 -4.1330 -11.7116 24 6 -0.1824 -3.3322 -10.7653 25 7 -0.2092 -3.3377 -7.1793 26 6 -0.4886 -2.8563 -2.4486 27 6 0.0209 -2.1347 -1.1994 28 1 -0.3430 1.0565 -2.4486 29 1 1.1104 0.0290 -2.4486 30 1 -0.1261 -0.1784 -4.5879 31 1 -1.5791 -0.6930 -3.6983 32 1 -1.2772 -3.3574 -4.8500 33 1 1.7751 -1.4414 -5.2918 34 1 2.9639 -1.2985 -7.4631 35 1 -1.2726 -5.9466 -7.6676 36 1 0.8791 -6.3763 -6.7237 37 1 0.8348 -8.1727 -9.6554 38 1 -0.3524 -8.7997 -7.6266 39 1 -0.8435 -3.8461 -12.7377 40 1 0.0835 -2.3008 -10.9439 41 1 -1.5786 -2.8567 -2.4489 42 1 -0.1246 -3.8836 -2.4483 43 1 -0.3421 -2.6490 -0.3094 44 1 1.1109 -2.1344 -1.1991 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081502_17085348.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:36:41 Heat of formation + Delta-G solvation = 175.833555 kcal Electronic energy + Delta-G solvation = -26795.638805 eV Core-core repulsion = 23153.218396 eV Total energy + Delta-G solvation = -3642.420409 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.133 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -43.62988 -42.63926 -40.42722 -39.66818 -38.18213 -37.01500 -34.74955 -34.12407 -33.08131 -32.10683 -30.73239 -28.24870 -26.32456 -25.96483 -25.64075 -24.68319 -24.04840 -23.35070 -21.49243 -21.30432 -21.13985 -20.05587 -19.73005 -19.45926 -19.13990 -18.52885 -18.04519 -17.68574 -17.47321 -16.98963 -16.87645 -16.69548 -16.56834 -16.18246 -15.78852 -15.51527 -15.43174 -15.38362 -14.90121 -14.70061 -14.61949 -14.51994 -14.38580 -14.28540 -13.99233 -13.85230 -13.39360 -13.36512 -12.98328 -12.80369 -12.51391 -12.21476 -11.71607 -11.30946 -10.85035 -10.28028 -10.16509 -9.81689 -5.70518 -1.29107 -0.97395 -0.42715 -0.30082 -0.07941 0.29866 0.58467 0.59986 0.61096 0.67212 0.77798 0.94902 1.11713 1.32821 1.39406 1.49102 1.58065 1.86460 1.93021 2.08468 2.23033 2.24988 2.28309 2.32316 2.46730 2.57218 2.65700 2.71135 2.75810 2.81387 2.97496 3.05813 3.10873 3.17339 3.31547 3.36980 3.52838 3.60060 3.72971 3.83139 3.91496 3.95797 4.29677 4.45784 4.66838 4.79372 4.91369 5.25850 5.64493 5.68355 6.62194 Molecular weight = 334.13amu Principal moments of inertia in cm(-1) A = 0.019171 B = 0.003198 C = 0.002912 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1460.200157 B = 8752.283301 C = 9611.450617 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.434 0.566 3 H 0.438 0.562 4 H 0.437 0.563 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.140 4.140 8 C -0.138 4.138 9 C 0.152 3.848 10 H 0.090 0.910 11 N -0.716 5.716 12 C 0.438 3.562 13 C -0.306 4.306 14 C 0.182 3.818 15 N -0.543 5.543 16 C 0.452 3.548 17 C -0.040 4.040 18 C -0.175 4.175 19 C -0.022 4.022 20 O -0.526 6.526 21 Si 0.653 3.347 22 S 0.200 5.800 23 C -0.222 4.222 24 C -0.103 4.103 25 N -0.549 5.549 26 C -0.126 4.126 27 C -0.137 4.137 28 H 0.094 0.906 29 H 0.091 0.909 30 H 0.091 0.909 31 H 0.082 0.918 32 H 0.409 0.591 33 H 0.134 0.866 34 H 0.166 0.834 35 H 0.088 0.912 36 H 0.376 0.624 37 H -0.240 1.240 38 H -0.243 1.243 39 H 0.175 0.825 40 H 0.148 0.852 41 H 0.084 0.916 42 H 0.094 0.906 43 H 0.096 0.904 44 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.750 15.481 32.215 35.847 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.262 0.738 3 H 0.266 0.734 4 H 0.266 0.734 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.178 4.178 8 C -0.178 4.178 9 C 0.046 3.954 10 H 0.107 0.893 11 N -0.350 5.350 12 C 0.194 3.806 13 C -0.334 4.334 14 C 0.018 3.982 15 N -0.260 5.260 16 C 0.184 3.816 17 C -0.056 4.056 18 C -0.296 4.296 19 C -0.133 4.133 20 O -0.333 6.333 21 Si 0.551 3.449 22 S 0.466 5.534 23 C -0.357 4.357 24 C -0.133 4.133 25 N -0.271 5.271 26 C -0.165 4.165 27 C -0.176 4.176 28 H 0.112 0.888 29 H 0.109 0.891 30 H 0.109 0.891 31 H 0.100 0.900 32 H 0.245 0.755 33 H 0.152 0.848 34 H 0.183 0.817 35 H 0.106 0.894 36 H 0.223 0.777 37 H -0.163 1.163 38 H -0.167 1.167 39 H 0.192 0.808 40 H 0.166 0.834 41 H 0.103 0.897 42 H 0.113 0.887 43 H 0.114 0.886 44 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -3.114 13.305 30.248 33.191 hybrid contribution 1.368 2.057 2.821 3.750 sum -1.747 15.362 33.069 36.504 Atomic orbital electron populations 1.42642 1.21315 1.20776 1.18652 0.73759 0.73356 0.73401 1.23583 1.04572 0.95701 0.84154 0.83816 1.22059 1.03121 1.00356 0.92261 1.22079 1.02773 0.95767 0.97137 1.20991 0.99789 0.90621 0.84019 0.89254 1.44230 1.29704 1.55279 1.05744 1.18312 0.87727 0.88257 0.86261 1.22050 1.00070 1.09892 1.01378 1.22932 0.96922 0.91251 0.87101 1.68536 1.13313 1.11516 1.32637 1.20245 0.85387 0.87318 0.88689 1.16786 1.04916 0.92132 0.91784 1.23337 1.08004 0.97782 1.00441 1.23970 0.90526 1.06815 0.92007 1.86593 1.42866 1.63654 1.40151 0.95422 0.89629 0.74253 0.85583 1.83092 1.60714 1.12352 0.97225 1.25736 1.08804 0.96916 1.04200 1.20071 1.00938 1.01644 0.90613 1.67860 1.35389 1.25211 0.98678 1.21740 1.02661 1.00815 0.91258 1.22019 1.03243 0.90797 1.01506 0.88779 0.89064 0.89089 0.89981 0.75469 0.84801 0.81731 0.89388 0.77668 1.16293 1.16668 0.80788 0.83449 0.89749 0.88724 0.88579 0.88941 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.46 4.15 -4.67 -0.02 24.44 16 2 H 0.43 -17.11 8.90 -39.29 -0.35 -17.46 16 3 H 0.44 -17.41 8.96 -39.29 -0.35 -17.76 16 4 H 0.44 -17.45 8.96 -39.29 -0.35 -17.81 16 5 C 0.02 -0.77 3.03 -67.71 -0.20 -0.98 16 6 H 0.14 -4.67 8.14 -51.93 -0.42 -5.09 16 7 C -0.14 3.97 5.43 -26.73 -0.15 3.82 16 8 C -0.14 3.11 5.46 -26.73 -0.15 2.96 16 9 C 0.15 -3.17 2.15 -67.93 -0.15 -3.32 16 10 H 0.09 -1.84 6.51 -51.93 -0.34 -2.18 16 11 N -0.72 11.12 5.23 -53.79 -0.28 10.84 16 12 C 0.44 -4.66 7.68 -154.86 -1.19 -5.85 16 13 C -0.31 3.50 8.93 -39.05 -0.35 3.15 16 14 C 0.18 -1.54 11.28 -17.32 -0.20 -1.73 16 15 N -0.54 2.48 10.31 -11.26 -0.12 2.36 16 16 C 0.45 -2.07 5.83 -156.90 -0.92 -2.99 16 17 C -0.04 0.17 5.58 -106.64 -0.60 -0.43 16 18 C -0.18 0.94 5.63 -35.61 -0.20 0.74 16 19 C -0.02 0.16 2.36 36.00 0.09 0.24 16 20 O -0.53 3.36 10.39 -35.23 -0.37 2.99 16 21 Si 0.65 -4.83 31.13 -169.99 -5.29 -10.12 16 22 S 0.20 -1.37 20.50 -107.50 -2.20 -3.57 16 23 C -0.22 1.45 11.20 28.95 0.32 1.77 16 24 C -0.10 0.53 10.06 -40.83 -0.41 0.12 16 25 N -0.55 3.80 8.84 -10.41 -0.09 3.71 16 26 C -0.13 2.98 5.39 -26.73 -0.14 2.84 16 27 C -0.14 3.98 5.43 -26.73 -0.15 3.83 16 28 H 0.09 -2.71 8.14 -51.93 -0.42 -3.13 16 29 H 0.09 -2.63 8.14 -51.93 -0.42 -3.05 16 30 H 0.09 -1.75 7.76 -51.93 -0.40 -2.16 16 31 H 0.08 -1.78 8.14 -51.93 -0.42 -2.20 16 32 H 0.41 -6.29 8.73 -40.82 -0.36 -6.64 16 33 H 0.13 -2.07 6.29 -52.49 -0.33 -2.40 16 34 H 0.17 -1.84 8.06 -52.49 -0.42 -2.26 16 35 H 0.09 -0.76 7.96 -51.93 -0.41 -1.17 16 36 H 0.38 -3.79 8.74 45.56 0.40 -3.39 16 37 H -0.24 0.89 7.11 56.52 0.40 1.29 16 38 H -0.24 1.49 7.11 56.52 0.40 1.89 16 39 H 0.17 -1.52 8.06 -52.49 -0.42 -1.94 16 40 H 0.15 -0.88 8.06 -52.49 -0.42 -1.30 16 41 H 0.08 -1.97 8.14 -51.93 -0.42 -2.39 16 42 H 0.09 -2.02 8.14 -51.93 -0.42 -2.44 16 43 H 0.10 -2.84 8.14 -51.93 -0.42 -3.26 16 44 H 0.09 -2.69 8.14 -51.93 -0.42 -3.11 16 LS Contribution 362.36 15.07 5.46 5.46 Total: 1.00 -44.04 362.36 -13.63 -57.68 By element: Atomic # 1 Polarization: -91.62 SS G_CDS: -6.34 Total: -97.97 kcal Atomic # 6 Polarization: 8.57 SS G_CDS: -4.38 Total: 4.19 kcal Atomic # 7 Polarization: 41.85 SS G_CDS: -0.51 Total: 41.34 kcal Atomic # 8 Polarization: 3.36 SS G_CDS: -0.37 Total: 2.99 kcal Atomic # 14 Polarization: -4.83 SS G_CDS: -5.29 Total: -10.12 kcal Atomic # 16 Polarization: -1.37 SS G_CDS: -2.20 Total: -3.57 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -44.04 -13.63 -57.68 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081502_17085348.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 233.510 kcal (2) G-P(sol) polarization free energy of solvation -44.043 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 189.467 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.633 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -57.676 kcal (6) G-S(sol) free energy of system = (1) + (5) 175.834 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds