Wall clock time and date at job start Mon Mar 8 2021 08:45:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00897 * 1 3 3 H 1.00897 * 109.47027 * 1 2 4 4 H 1.00896 * 109.47457 * 239.99843 * 1 2 3 5 5 C 1.46897 * 109.46771 * 119.99527 * 1 2 3 6 6 H 1.09004 * 109.47436 * 300.00033 * 5 1 2 7 7 C 1.53001 * 109.47185 * 60.00567 * 5 1 2 8 8 C 1.53003 * 109.47215 * 179.97438 * 7 5 1 9 9 C 1.52998 * 109.47179 * 299.99907 * 8 7 5 10 10 H 1.09000 * 109.46988 * 300.00379 * 9 8 7 11 11 N 1.46492 * 109.47142 * 180.02562 * 9 8 7 12 12 C 1.39006 * 120.00214 * 155.00086 * 11 9 8 13 13 C 1.39269 * 120.02024 * 359.97438 * 12 11 9 14 14 N 1.32055 * 120.14267 * 180.02562 * 13 12 11 15 15 C 1.32030 * 120.19803 * 359.70376 * 14 13 12 16 16 C 1.39441 * 120.04323 * 0.57494 * 15 14 13 17 17 C 1.48184 * 120.07543 * 179.70489 * 16 15 14 18 18 C 1.34699 * 122.79407 * 227.67580 * 17 16 15 19 19 C 1.50701 * 125.23453 * 359.69939 * 18 17 16 20 20 O 1.42904 * 109.46841 * 38.24392 * 19 18 17 21 21 Si 1.86302 * 109.46871 * 158.24099 * 19 18 17 22 22 S 1.75853 * 109.52903 * 179.72813 * 18 17 16 23 23 C 1.75809 * 91.16318 * 359.97438 * 22 18 17 24 24 C 1.32988 * 109.96719 * 0.02562 * 23 22 18 25 25 N 1.32618 * 120.02628 * 179.97438 * 12 11 9 26 26 C 1.53001 * 109.46971 * 59.99943 * 9 8 7 27 27 C 1.52998 * 109.47118 * 180.02562 * 5 1 2 28 28 H 1.08992 * 109.47163 * 59.99819 * 7 5 1 29 29 H 1.09002 * 109.46854 * 299.99560 * 7 5 1 30 30 H 1.08994 * 109.47245 * 179.97438 * 8 7 5 31 31 H 1.09009 * 109.46967 * 59.99756 * 8 7 5 32 32 H 0.96997 * 120.00270 * 334.99332 * 11 9 8 33 33 H 1.08002 * 119.93028 * 359.97438 * 13 12 11 34 34 H 1.07999 * 119.97937 * 180.27524 * 15 14 13 35 35 H 1.08998 * 109.47522 * 278.24383 * 19 18 17 36 36 H 0.96697 * 113.99497 * 184.97156 * 20 19 18 37 37 H 1.48499 * 109.99877 * 300.00372 * 21 19 18 38 38 H 1.48499 * 110.00053 * 61.32360 * 21 19 18 39 39 H 1.08002 * 125.01486 * 180.02562 * 23 22 18 40 40 H 1.08006 * 122.53421 * 180.02562 * 24 23 22 41 41 H 1.08996 * 109.47623 * 60.00250 * 26 9 8 42 42 H 1.09002 * 109.46854 * 180.02562 * 26 9 8 43 43 H 1.08997 * 109.47473 * 299.99867 * 27 5 1 44 44 H 1.09004 * 109.47229 * 59.99986 * 27 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3363 0.9513 0.0000 4 1 -0.3364 -0.4756 0.8238 5 6 -0.4896 -0.6924 -1.1995 6 1 -0.1262 -0.1785 -2.0895 7 6 0.0204 -2.1349 -1.1995 8 6 -0.4901 -2.8563 -2.4485 9 6 -2.0201 -2.8563 -2.4481 10 1 -2.3831 -3.3699 -1.5579 11 7 -2.5088 -3.5475 -3.6436 12 6 -3.7691 -4.1338 -3.6411 13 6 -4.5674 -4.0649 -2.5020 14 7 -5.7649 -4.6215 -2.4968 15 6 -6.2140 -5.2410 -3.5728 16 6 -5.4191 -5.3199 -4.7157 17 6 -5.9198 -6.0206 -5.9216 18 6 -5.1845 -6.9234 -6.5988 19 6 -3.7797 -7.3404 -6.2469 20 8 -3.6482 -7.4195 -4.8262 21 14 -3.4203 -9.0072 -6.9976 22 16 -6.1156 -7.5398 -7.9573 23 6 -7.4831 -6.5215 -7.5283 24 6 -7.1939 -5.8051 -6.4458 25 7 -4.2122 -4.7592 -4.7234 26 6 -2.5300 -1.4137 -2.4480 27 6 -2.0196 -0.6919 -1.1999 28 1 -0.3430 -2.6488 -0.3097 29 1 1.1104 -2.1349 -1.1995 30 1 -0.1265 -3.8838 -2.4488 31 1 -0.1270 -2.3425 -3.3388 32 1 -1.9530 -3.5959 -4.4371 33 1 -4.2060 -3.5558 -1.6207 34 1 -7.1957 -5.6911 -3.5661 35 1 -3.0744 -6.6066 -6.6368 36 1 -2.7492 -7.6089 -4.5244 37 1 -4.3754 -10.0166 -6.4740 38 1 -3.5227 -8.9306 -8.4771 39 1 -8.4197 -6.4834 -8.0647 40 1 -7.8932 -5.1096 -6.0057 41 1 -2.1670 -0.8999 -3.3381 42 1 -3.6200 -1.4137 -2.4472 43 1 -2.3833 -1.2055 -0.3100 44 1 -2.3826 0.3359 -1.2001 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081502_17085452.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:45:20 Heat of formation + Delta-G solvation = 175.410101 kcal Electronic energy + Delta-G solvation = -26765.822733 eV Core-core repulsion = 23123.383962 eV Total energy + Delta-G solvation = -3642.438771 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.133 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -43.60777 -42.76514 -40.40133 -39.69862 -38.12279 -36.95398 -35.48896 -34.08261 -32.82535 -32.01264 -30.46410 -28.26971 -26.33285 -25.97946 -25.75196 -24.61980 -24.12365 -23.36344 -21.44478 -21.26107 -21.00523 -20.03068 -19.73185 -19.33101 -19.10636 -18.59174 -18.38749 -17.96779 -17.52263 -17.32829 -16.86110 -16.61688 -16.52636 -16.15975 -15.74156 -15.50243 -15.41346 -15.12452 -14.96918 -14.83304 -14.62852 -14.54937 -14.27106 -14.18802 -14.02301 -13.81141 -13.38422 -13.36304 -13.16916 -13.05478 -12.72656 -12.50479 -12.06798 -11.22584 -10.86734 -10.23729 -10.21107 -9.70058 -5.82686 -1.25773 -1.12420 -0.57325 -0.37730 -0.22543 0.20065 0.56017 0.61820 0.62271 0.69321 0.79580 0.95121 1.03392 1.33547 1.42764 1.52318 1.61519 1.89878 1.95359 2.09394 2.17723 2.27056 2.30840 2.35191 2.48705 2.57674 2.66675 2.68166 2.77386 2.80191 2.81251 3.07019 3.09269 3.20481 3.35139 3.42852 3.47005 3.53146 3.56655 3.63843 3.75865 3.84295 4.25420 4.42872 4.50320 4.65000 4.78853 5.33485 5.76518 5.82486 6.20957 Molecular weight = 334.13amu Principal moments of inertia in cm(-1) A = 0.019433 B = 0.003165 C = 0.002886 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1440.515887 B = 8844.416441 C = 9698.086935 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.438 0.562 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.138 4.138 8 C -0.125 4.125 9 C 0.152 3.848 10 H 0.089 0.911 11 N -0.718 5.718 12 C 0.358 3.642 13 C -0.022 4.022 14 N -0.398 5.398 15 C 0.007 3.993 16 C 0.226 3.774 17 C -0.047 4.047 18 C -0.143 4.143 19 C -0.022 4.022 20 O -0.538 6.538 21 Si 0.664 3.336 22 S 0.123 5.877 23 C -0.200 4.200 24 C -0.120 4.120 25 N -0.476 5.476 26 C -0.139 4.139 27 C -0.140 4.140 28 H 0.093 0.907 29 H 0.096 0.904 30 H 0.095 0.905 31 H 0.083 0.917 32 H 0.408 0.592 33 H 0.155 0.845 34 H 0.166 0.834 35 H 0.086 0.914 36 H 0.380 0.620 37 H -0.240 1.240 38 H -0.238 1.238 39 H 0.175 0.825 40 H 0.149 0.851 41 H 0.082 0.918 42 H 0.090 0.910 43 H 0.092 0.908 44 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 21.344 22.296 19.054 36.273 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.266 0.734 4 H 0.263 0.737 5 C -0.080 4.080 6 H 0.161 0.839 7 C -0.176 4.176 8 C -0.164 4.164 9 C 0.046 3.954 10 H 0.107 0.893 11 N -0.353 5.353 12 C 0.120 3.880 13 C -0.189 4.189 14 N -0.110 5.110 15 C -0.155 4.155 16 C 0.083 3.917 17 C -0.061 4.061 18 C -0.261 4.261 19 C -0.135 4.135 20 O -0.343 6.343 21 Si 0.563 3.437 22 S 0.387 5.613 23 C -0.335 4.335 24 C -0.150 4.150 25 N -0.197 5.197 26 C -0.179 4.179 27 C -0.179 4.179 28 H 0.111 0.889 29 H 0.114 0.886 30 H 0.114 0.886 31 H 0.102 0.898 32 H 0.244 0.756 33 H 0.172 0.828 34 H 0.184 0.816 35 H 0.104 0.896 36 H 0.227 0.773 37 H -0.163 1.163 38 H -0.162 1.162 39 H 0.193 0.807 40 H 0.167 0.833 41 H 0.100 0.900 42 H 0.108 0.892 43 H 0.110 0.890 44 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 20.553 20.627 17.290 33.865 hybrid contribution -0.243 1.707 0.996 1.991 sum 20.310 22.334 18.286 35.294 Atomic orbital electron populations 1.42644 1.21205 1.20730 1.18816 0.73419 0.73377 0.73737 1.23585 0.99635 0.97484 0.87316 0.83855 1.22025 1.02837 0.90806 1.01921 1.21731 0.94308 1.03104 0.97231 1.20988 0.93357 0.91808 0.89257 0.89273 1.44205 1.14918 1.59847 1.16297 1.19141 0.87200 0.90922 0.90765 1.22943 0.92442 1.05589 0.97958 1.68194 1.12195 1.03830 1.26823 1.23371 1.01905 1.01183 0.89041 1.19726 0.88362 0.90961 0.92609 1.17156 0.94140 0.98715 0.96087 1.23969 0.99611 1.02085 1.00484 1.23927 0.92806 1.09658 0.87061 1.86472 1.34106 1.94923 1.18833 0.95112 0.90109 0.77561 0.80963 1.84642 1.06672 1.42525 1.27423 1.25634 1.03027 1.02519 1.02286 1.20042 0.95746 1.02211 0.97003 1.67855 1.14537 1.11037 1.26297 1.22090 1.03414 0.95608 0.96775 1.22057 0.89381 1.04211 1.02217 0.88879 0.88589 0.88599 0.89791 0.75563 0.82755 0.81637 0.89614 0.77293 1.16304 1.16176 0.80734 0.83301 0.89959 0.89152 0.88984 0.88806 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.48 4.15 -4.67 -0.02 24.46 16 2 H 0.44 -17.48 8.96 -39.29 -0.35 -17.83 16 3 H 0.44 -17.40 8.96 -39.29 -0.35 -17.75 16 4 H 0.43 -17.12 8.90 -39.29 -0.35 -17.47 16 5 C 0.02 -0.77 3.02 -67.71 -0.20 -0.98 16 6 H 0.14 -4.68 8.14 -51.93 -0.42 -5.10 16 7 C -0.14 4.02 5.43 -26.73 -0.15 3.87 16 8 C -0.13 3.01 5.39 -26.73 -0.14 2.87 16 9 C 0.15 -3.23 2.14 -67.93 -0.15 -3.38 16 10 H 0.09 -1.87 6.46 -51.93 -0.34 -2.21 16 11 N -0.72 11.59 5.25 -53.85 -0.28 11.30 16 12 C 0.36 -4.00 7.64 -154.78 -1.18 -5.18 16 13 C -0.02 0.24 10.00 -17.07 -0.17 0.07 16 14 N -0.40 2.81 10.48 -12.60 -0.13 2.68 16 15 C 0.01 -0.04 10.75 -17.02 -0.18 -0.23 16 16 C 0.23 -1.44 5.06 -82.79 -0.42 -1.86 16 17 C -0.05 0.26 5.49 -106.62 -0.59 -0.32 16 18 C -0.14 0.78 5.80 -35.56 -0.21 0.58 16 19 C -0.02 0.17 2.41 36.01 0.09 0.26 16 20 O -0.54 4.42 10.35 -35.23 -0.36 4.06 16 21 Si 0.66 -5.23 31.29 -169.99 -5.32 -10.55 16 22 S 0.12 -0.66 20.88 -107.50 -2.24 -2.90 16 23 C -0.20 1.32 11.18 28.91 0.32 1.64 16 24 C -0.12 0.79 9.79 -40.95 -0.40 0.39 16 25 N -0.48 3.79 8.98 -8.80 -0.08 3.71 16 26 C -0.14 3.15 5.42 -26.75 -0.15 3.01 16 27 C -0.14 3.99 5.43 -26.76 -0.15 3.84 16 28 H 0.09 -2.73 8.14 -51.93 -0.42 -3.15 16 29 H 0.10 -2.86 8.14 -51.93 -0.42 -3.28 16 30 H 0.10 -2.10 8.14 -51.93 -0.42 -2.53 16 31 H 0.08 -1.99 8.14 -51.92 -0.42 -2.42 16 32 H 0.41 -6.55 8.73 -40.82 -0.36 -6.90 16 33 H 0.16 -2.25 6.08 -52.49 -0.32 -2.57 16 34 H 0.17 -1.24 8.05 -52.49 -0.42 -1.66 16 35 H 0.09 -0.79 7.96 -51.93 -0.41 -1.20 16 36 H 0.38 -4.81 8.86 45.56 0.40 -4.40 16 37 H -0.24 0.99 7.11 56.52 0.40 1.39 16 38 H -0.24 1.33 7.11 56.52 0.40 1.73 16 39 H 0.18 -1.52 8.06 -52.49 -0.42 -1.94 16 40 H 0.15 -1.27 8.06 -52.48 -0.42 -1.69 16 41 H 0.08 -1.80 8.14 -51.93 -0.42 -2.22 16 42 H 0.09 -1.74 7.68 -51.93 -0.40 -2.14 16 43 H 0.09 -2.65 8.14 -51.93 -0.42 -3.07 16 44 H 0.09 -2.69 8.14 -51.93 -0.42 -3.11 16 LS Contribution 362.46 15.07 5.46 5.46 Total: 1.00 -43.76 362.46 -12.97 -56.73 By element: Atomic # 1 Polarization: -93.21 SS G_CDS: -6.32 Total: -99.54 kcal Atomic # 6 Polarization: 8.26 SS G_CDS: -3.67 Total: 4.59 kcal Atomic # 7 Polarization: 42.67 SS G_CDS: -0.51 Total: 42.15 kcal Atomic # 8 Polarization: 4.42 SS G_CDS: -0.36 Total: 4.06 kcal Atomic # 14 Polarization: -5.23 SS G_CDS: -5.32 Total: -10.55 kcal Atomic # 16 Polarization: -0.66 SS G_CDS: -2.24 Total: -2.90 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -43.76 -12.97 -56.73 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081502_17085452.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 232.135 kcal (2) G-P(sol) polarization free energy of solvation -43.757 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 188.378 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.968 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -56.725 kcal (6) G-S(sol) free energy of system = (1) + (5) 175.410 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds