Wall clock time and date at job start Mon Mar 8 2021 08:46:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00903 * 1 3 3 H 1.00900 * 109.47241 * 1 2 4 4 H 1.00901 * 109.46818 * 240.00116 * 1 2 3 5 5 C 1.46898 * 109.46897 * 120.00046 * 1 2 3 6 6 H 1.09007 * 109.46899 * 179.97438 * 5 1 2 7 7 C 1.52996 * 109.47312 * 299.99897 * 5 1 2 8 8 C 1.53002 * 109.47236 * 180.02562 * 7 5 1 9 9 C 1.52997 * 109.46836 * 300.00128 * 8 7 5 10 10 H 1.08998 * 109.47315 * 299.99861 * 9 8 7 11 11 N 1.46505 * 109.46883 * 179.97438 * 9 8 7 12 12 C 1.38415 * 119.99759 * 85.00296 * 11 9 8 13 13 N 1.32360 * 119.14986 * 179.97438 * 12 11 9 14 14 C 1.33218 * 120.58135 * 180.02562 * 13 12 11 15 15 C 1.48061 * 120.51572 * 179.97438 * 14 13 12 16 16 C 1.34568 * 122.86654 * 47.90904 * 15 14 13 17 17 C 1.50696 * 124.74691 * 359.97438 * 16 15 14 18 18 O 1.42898 * 109.47285 * 38.43545 * 17 16 15 19 19 Si 1.86304 * 109.47400 * 158.43138 * 17 16 15 20 20 S 1.70636 * 110.50985 * 179.97438 * 16 15 14 21 21 C 1.75731 * 91.70372 * 0.02562 * 20 16 15 22 22 C 1.33115 * 109.77754 * 359.72044 * 21 20 16 23 23 C 1.39882 * 118.96918 * 359.75129 * 14 13 12 24 24 C 1.38222 * 118.44399 * 0.48834 * 23 14 13 25 25 N 1.32438 * 119.30385 * 359.50565 * 24 23 14 26 26 C 1.52996 * 109.47312 * 59.99919 * 9 8 7 27 27 C 1.52997 * 109.47020 * 60.00183 * 5 1 2 28 28 H 1.09001 * 109.47102 * 300.00179 * 7 5 1 29 29 H 1.08994 * 109.47344 * 60.00066 * 7 5 1 30 30 H 1.08997 * 109.47374 * 179.97438 * 8 7 5 31 31 H 1.09008 * 109.46648 * 59.99794 * 8 7 5 32 32 H 0.96994 * 119.99729 * 264.99355 * 11 9 8 33 33 H 1.08998 * 109.47133 * 278.43364 * 17 16 15 34 34 H 0.96694 * 114.00374 * 59.99772 * 18 17 16 35 35 H 1.48495 * 110.00093 * 179.97438 * 19 17 16 36 36 H 1.48504 * 110.00234 * 301.32217 * 19 17 16 37 37 H 1.08005 * 125.11057 * 179.97438 * 21 20 16 38 38 H 1.07997 * 123.13152 * 180.26380 * 22 21 20 39 39 H 1.07997 * 120.77987 * 180.24654 * 23 14 13 40 40 H 1.07996 * 120.34482 * 179.78467 * 24 23 14 41 41 H 1.09002 * 109.47489 * 60.00258 * 26 9 8 42 42 H 1.09001 * 109.47102 * 179.97438 * 26 9 8 43 43 H 1.09003 * 109.47381 * 59.99956 * 27 5 1 44 44 H 1.08998 * 109.47315 * 299.99656 * 27 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9513 0.0000 4 1 -0.3363 -0.4756 0.8239 5 6 -0.4896 -0.6925 -1.1994 6 1 -1.5797 -0.6929 -1.1992 7 6 0.0204 0.0287 -2.4487 8 6 -0.4901 -0.6922 -3.6979 9 6 0.0194 -2.1348 -3.6981 10 1 1.1094 -2.1352 -3.6983 11 7 -0.4699 -2.8253 -4.8940 12 6 0.2246 -2.7201 -6.0867 13 7 -0.2323 -3.3513 -7.1566 14 6 0.4137 -3.2700 -8.3189 15 6 -0.0984 -3.9772 -9.5147 16 6 -1.3855 -3.9179 -9.9028 17 6 -2.4625 -3.1411 -9.1904 18 8 -1.9249 -1.9038 -8.7191 19 14 -3.8648 -2.8000 -10.3685 20 16 -1.6275 -4.8452 -11.3146 21 6 0.0655 -5.3141 -11.3601 22 6 0.7143 -4.7582 -10.3393 23 6 1.5807 -2.5024 -8.3931 24 6 2.0233 -1.8649 -7.2493 25 7 1.3300 -1.9903 -6.1279 26 6 -0.4906 -2.8561 -2.4489 27 6 0.0204 -2.1350 -1.1994 28 1 -0.3430 1.0564 -2.4487 29 1 1.1103 0.0288 -2.4487 30 1 -0.1272 -0.1782 -4.5879 31 1 -1.5802 -0.6918 -3.6976 32 1 -1.2804 -3.3563 -4.8499 33 1 -2.8312 -3.7224 -8.3453 34 1 -1.5775 -1.3339 -9.4188 35 1 -4.9338 -2.0349 -9.6778 36 1 -3.3687 -2.0352 -11.5409 37 1 0.5131 -5.9535 -12.1065 38 1 1.7703 -4.9006 -10.1633 39 1 2.1253 -2.4131 -9.3214 40 1 2.9225 -1.2673 -7.2710 41 1 -1.5806 -2.8558 -2.4487 42 1 -0.1279 -3.8840 -2.4493 43 1 -0.3430 -2.6488 -0.3094 44 1 1.1104 -2.1350 -1.1994 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081502_17085550.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:46:39 Heat of formation + Delta-G solvation = 174.103000 kcal Electronic energy + Delta-G solvation = -26832.663820 eV Core-core repulsion = 23190.168368 eV Total energy + Delta-G solvation = -3642.495451 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.133 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -43.44660 -42.65826 -40.45927 -39.64704 -38.20314 -36.52308 -35.23097 -33.89927 -32.95946 -32.16200 -30.44998 -28.37693 -26.12954 -25.89501 -25.64725 -24.61888 -24.10874 -23.23495 -21.37129 -21.26026 -21.13967 -19.95415 -19.81382 -19.49008 -19.00799 -18.11806 -17.81574 -17.42910 -17.35022 -17.02352 -16.93679 -16.76094 -16.44399 -16.00912 -15.88780 -15.74851 -15.48483 -15.22587 -14.77676 -14.67920 -14.49508 -14.45614 -14.42732 -14.36546 -14.10034 -13.54731 -13.12407 -13.10465 -12.94711 -12.67509 -12.40807 -12.39388 -12.24627 -11.49289 -10.83266 -10.38040 -10.15474 -9.86275 -5.74880 -1.16656 -1.04347 -0.46006 -0.41094 -0.16772 0.20776 0.55550 0.70055 0.72923 0.79095 0.87430 0.92263 1.02911 1.24225 1.53501 1.62955 1.72390 2.06542 2.11113 2.21983 2.33334 2.37011 2.44939 2.51415 2.55389 2.57750 2.75619 2.85658 2.93251 3.02305 3.03051 3.13459 3.26332 3.40855 3.47726 3.56551 3.62264 3.68934 3.72388 3.82073 3.90889 4.04390 4.24710 4.47246 4.50819 4.67481 5.01282 5.23654 5.58216 5.61889 6.58650 Molecular weight = 334.13amu Principal moments of inertia in cm(-1) A = 0.018805 B = 0.003232 C = 0.002982 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1488.617972 B = 8662.418625 C = 9386.320785 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.434 0.566 3 H 0.437 0.563 4 H 0.436 0.564 5 C 0.024 3.976 6 H 0.143 0.857 7 C -0.138 4.138 8 C -0.130 4.130 9 C 0.162 3.838 10 H 0.096 0.904 11 N -0.701 5.701 12 C 0.567 3.433 13 N -0.538 5.538 14 C 0.299 3.701 15 C -0.064 4.064 16 C -0.217 4.217 17 C -0.020 4.020 18 O -0.517 6.517 19 Si 0.655 3.345 20 S 0.197 5.803 21 C -0.217 4.217 22 C -0.116 4.116 23 C -0.272 4.272 24 C 0.189 3.811 25 N -0.577 5.577 26 C -0.129 4.129 27 C -0.136 4.136 28 H 0.090 0.910 29 H 0.091 0.909 30 H 0.090 0.910 31 H 0.074 0.926 32 H 0.414 0.586 33 H 0.128 0.872 34 H 0.371 0.629 35 H -0.239 1.239 36 H -0.244 1.244 37 H 0.174 0.826 38 H 0.147 0.853 39 H 0.144 0.856 40 H 0.167 0.833 41 H 0.081 0.919 42 H 0.093 0.907 43 H 0.094 0.906 44 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.646 9.997 28.563 30.377 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.033 5.033 2 H 0.262 0.738 3 H 0.265 0.735 4 H 0.265 0.735 5 C -0.080 4.080 6 H 0.161 0.839 7 C -0.176 4.176 8 C -0.169 4.169 9 C 0.056 3.944 10 H 0.114 0.886 11 N -0.339 5.339 12 C 0.210 3.790 13 N -0.258 5.258 14 C 0.149 3.851 15 C -0.080 4.080 16 C -0.338 4.338 17 C -0.132 4.132 18 O -0.322 6.322 19 Si 0.553 3.447 20 S 0.463 5.537 21 C -0.352 4.352 22 C -0.146 4.146 23 C -0.298 4.298 24 C 0.023 3.977 25 N -0.300 5.300 26 C -0.167 4.167 27 C -0.174 4.174 28 H 0.109 0.891 29 H 0.110 0.890 30 H 0.109 0.891 31 H 0.093 0.907 32 H 0.252 0.748 33 H 0.146 0.854 34 H 0.218 0.782 35 H -0.162 1.162 36 H -0.168 1.168 37 H 0.191 0.809 38 H 0.165 0.835 39 H 0.162 0.838 40 H 0.185 0.815 41 H 0.100 0.900 42 H 0.111 0.889 43 H 0.112 0.888 44 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 0.200 9.917 28.575 30.248 hybrid contribution 2.389 1.161 0.373 2.682 sum 2.589 11.078 28.948 31.103 Atomic orbital electron populations 1.42658 1.21309 1.20704 1.18676 0.73774 0.73456 0.73512 1.23605 1.04437 0.95809 0.84158 0.83949 1.22045 1.03203 1.00074 0.92278 1.21965 1.01811 0.96164 0.96980 1.20850 1.00378 0.90066 0.83094 0.88569 1.43837 1.29218 1.55557 1.05329 1.19062 0.86398 0.87311 0.86262 1.67849 1.33980 1.25346 0.98641 1.19192 0.88073 0.88521 0.89272 1.17231 0.92487 1.02383 0.95852 1.24544 0.98963 1.07335 1.02941 1.24340 0.98475 0.85577 1.04772 1.86630 1.80154 1.28996 1.36427 0.95324 0.78976 0.91604 0.78767 1.83224 1.08533 1.41923 1.19977 1.25783 0.97062 1.07918 1.04463 1.20109 1.01145 0.98646 0.94650 1.22551 1.00584 1.04787 1.01863 1.22771 0.96188 0.92212 0.86492 1.67791 1.08994 1.23026 1.30226 1.21789 1.02422 1.00848 0.91685 1.22008 1.03252 0.90717 1.01414 0.89144 0.89019 0.89123 0.90720 0.74849 0.85403 0.78207 1.16179 1.16790 0.80906 0.83510 0.83798 0.81541 0.90010 0.88881 0.88764 0.88951 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 23.55 4.15 -4.67 -0.02 23.53 16 2 H 0.43 -16.48 8.90 -39.29 -0.35 -16.83 16 3 H 0.44 -16.80 8.96 -39.29 -0.35 -17.15 16 4 H 0.44 -16.88 8.96 -39.29 -0.35 -17.24 16 5 C 0.02 -0.73 3.02 -67.72 -0.20 -0.93 16 6 H 0.14 -4.39 8.14 -51.93 -0.42 -4.81 16 7 C -0.14 3.60 5.43 -26.73 -0.15 3.45 16 8 C -0.13 2.56 5.51 -26.73 -0.15 2.41 16 9 C 0.16 -2.94 2.45 -67.93 -0.17 -3.11 16 10 H 0.10 -1.61 7.50 -51.93 -0.39 -2.00 16 11 N -0.70 9.30 5.22 -55.82 -0.29 9.01 16 12 C 0.57 -5.19 8.40 -322.93 -2.71 -7.91 16 13 N -0.54 3.84 8.94 -10.48 -0.09 3.75 16 14 C 0.30 -2.15 5.05 -82.62 -0.42 -2.57 16 15 C -0.06 0.46 5.50 -106.64 -0.59 -0.13 16 16 C -0.22 1.67 5.61 -35.61 -0.20 1.47 16 17 C -0.02 0.16 2.41 36.00 0.09 0.25 16 18 O -0.52 3.85 10.41 -35.23 -0.37 3.48 16 19 Si 0.66 -5.39 31.13 -169.99 -5.29 -10.68 16 20 S 0.20 -1.66 20.49 -107.50 -2.20 -3.86 16 21 C -0.22 1.83 11.20 28.95 0.32 2.15 16 22 C -0.12 0.92 9.92 -40.83 -0.40 0.51 16 23 C -0.27 2.39 9.74 -38.97 -0.38 2.01 16 24 C 0.19 -1.85 11.29 -17.30 -0.20 -2.04 16 25 N -0.58 5.55 9.19 -14.01 -0.13 5.43 16 26 C -0.13 2.78 5.39 -26.71 -0.14 2.64 16 27 C -0.14 3.68 5.43 -26.71 -0.15 3.53 16 28 H 0.09 -2.41 8.14 -51.93 -0.42 -2.83 16 29 H 0.09 -2.40 8.14 -51.93 -0.42 -2.82 16 30 H 0.09 -1.42 8.14 -51.93 -0.42 -1.84 16 31 H 0.07 -1.43 8.14 -51.92 -0.42 -1.85 16 32 H 0.41 -5.58 8.71 -40.82 -0.36 -5.93 16 33 H 0.13 -1.06 7.96 -51.93 -0.41 -1.48 16 34 H 0.37 -3.38 8.70 45.56 0.40 -2.99 16 35 H -0.24 1.32 7.11 56.52 0.40 1.72 16 36 H -0.24 1.46 7.11 56.52 0.40 1.86 16 37 H 0.17 -1.76 8.06 -52.48 -0.42 -2.18 16 38 H 0.15 -1.36 8.06 -52.49 -0.42 -1.78 16 39 H 0.14 -1.46 8.06 -52.49 -0.42 -1.88 16 40 H 0.17 -2.10 8.06 -52.49 -0.42 -2.52 16 41 H 0.08 -1.76 8.14 -51.93 -0.42 -2.18 16 42 H 0.09 -1.80 8.14 -51.93 -0.42 -2.22 16 43 H 0.09 -2.64 8.14 -51.93 -0.42 -3.06 16 44 H 0.09 -2.51 8.14 -51.93 -0.42 -2.93 16 LS Contribution 365.31 15.07 5.51 5.51 Total: 1.00 -40.24 365.31 -14.84 -55.08 By element: Atomic # 1 Polarization: -86.45 SS G_CDS: -6.51 Total: -92.96 kcal Atomic # 6 Polarization: 7.17 SS G_CDS: -5.44 Total: 1.73 kcal Atomic # 7 Polarization: 42.25 SS G_CDS: -0.53 Total: 41.71 kcal Atomic # 8 Polarization: 3.85 SS G_CDS: -0.37 Total: 3.48 kcal Atomic # 14 Polarization: -5.39 SS G_CDS: -5.29 Total: -10.68 kcal Atomic # 16 Polarization: -1.66 SS G_CDS: -2.20 Total: -3.86 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -40.24 -14.84 -55.08 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081502_17085550.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 229.179 kcal (2) G-P(sol) polarization free energy of solvation -40.239 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 188.940 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.837 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -55.076 kcal (6) G-S(sol) free energy of system = (1) + (5) 174.103 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds