Wall clock time and date at job start Mon Mar 8 2021 09:21:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00892 * 1 3 3 H 1.00901 * 109.47136 * 1 2 4 4 H 1.00894 * 109.47621 * 240.00238 * 1 2 3 5 5 C 1.46905 * 109.47420 * 119.99736 * 1 2 3 6 6 H 1.08996 * 109.47026 * 300.00332 * 5 1 2 7 7 C 1.53000 * 109.46583 * 60.00173 * 5 1 2 8 8 C 1.53002 * 109.46759 * 179.97438 * 7 5 1 9 9 C 1.53004 * 109.47188 * 300.00381 * 8 7 5 10 10 H 1.09004 * 109.46824 * 299.99402 * 9 8 7 11 11 N 1.46502 * 109.47140 * 180.02562 * 9 8 7 12 12 C 1.34774 * 120.00092 * 154.99696 * 11 9 8 13 13 O 1.21554 * 120.00112 * 359.97438 * 12 11 9 14 14 C 1.47851 * 119.99684 * 179.97438 * 12 11 9 15 15 C 1.39508 * 119.97059 * 180.02562 * 14 12 11 16 16 N 1.31940 * 120.01596 * 180.02562 * 15 14 12 17 17 C 1.33072 * 119.97034 * 0.02562 * 16 15 14 18 18 C 1.47907 * 120.02704 * 179.97438 * 17 16 15 19 19 C 1.34699 * 122.88862 * 5.99675 * 18 17 16 20 20 C 1.50700 * 124.75161 * 0.03697 * 19 18 17 21 21 O 1.42894 * 109.47218 * 145.20283 * 20 19 18 22 22 Si 1.86305 * 109.47125 * 265.20449 * 20 19 18 23 23 S 1.70629 * 110.49650 * 179.77468 * 19 18 17 24 24 C 1.75728 * 91.71919 * 0.22517 * 23 19 18 25 25 C 1.33077 * 109.80533 * 0.02562 * 24 23 19 26 26 C 1.40112 * 119.94690 * 0.24997 * 17 16 15 27 27 N 1.31475 * 119.98241 * 359.47871 * 26 17 16 28 28 C 1.52991 * 109.47226 * 59.99675 * 9 8 7 29 29 C 1.52991 * 109.47477 * 299.99960 * 28 9 8 30 30 H 1.08996 * 109.47310 * 60.00332 * 7 5 1 31 31 H 1.08993 * 109.47075 * 299.99828 * 7 5 1 32 32 H 1.09001 * 109.47406 * 180.02562 * 8 7 5 33 33 H 1.09009 * 109.47224 * 59.99872 * 8 7 5 34 34 H 0.97003 * 120.00024 * 334.99818 * 11 9 8 35 35 H 1.08000 * 119.99226 * 0.04213 * 15 14 12 36 36 H 1.09000 * 109.46941 * 25.19878 * 20 19 18 37 37 H 0.96702 * 114.00078 * 60.00264 * 21 20 19 38 38 H 1.48502 * 109.99877 * 179.97438 * 22 20 19 39 39 H 1.48497 * 109.99761 * 301.31783 * 22 20 19 40 40 H 1.07997 * 125.09528 * 179.97438 * 24 23 19 41 41 H 1.08002 * 123.11764 * 180.02562 * 25 24 23 42 42 H 1.08005 * 120.00980 * 179.72867 * 26 17 16 43 43 H 1.09009 * 109.47169 * 60.00520 * 28 9 8 44 44 H 1.09004 * 109.47004 * 179.97438 * 28 9 8 45 45 H 1.09001 * 109.47549 * 300.00145 * 29 28 9 46 46 H 1.09001 * 109.47581 * 179.97438 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0089 0.0000 0.0000 3 1 -0.3363 0.9513 0.0000 4 1 -0.3364 -0.4756 0.8238 5 6 -0.4898 -0.6924 -1.1995 6 1 -0.1264 -0.1786 -2.0894 7 6 0.0202 -2.1350 -1.1994 8 6 -0.4903 -2.8564 -2.4484 9 6 -2.0204 -2.8562 -2.4477 10 1 -2.3834 -3.3700 -1.5575 11 7 -2.5093 -3.5475 -3.6433 12 6 -3.7312 -4.1160 -3.6407 13 8 -4.4276 -4.0556 -2.6462 14 6 -4.2248 -4.8132 -4.8475 15 6 -5.4899 -5.4010 -4.8443 16 7 -5.9310 -6.0238 -5.9206 17 6 -5.1684 -6.0914 -7.0090 18 6 -5.6614 -6.7898 -8.2160 19 6 -6.9136 -7.2750 -8.3201 20 6 -7.9653 -7.1760 -7.2453 21 8 -9.2495 -7.0093 -7.8494 22 14 -7.9572 -8.7336 -6.2232 23 16 -7.1446 -8.0111 -9.8420 24 6 -5.4952 -7.6476 -10.3272 25 6 -4.8670 -7.0067 -9.3446 26 6 -3.8956 -5.5056 -7.0087 27 7 -3.4601 -4.8809 -5.9369 28 6 -2.5303 -1.4138 -2.4477 29 6 -2.0198 -0.6924 -1.1988 30 1 -0.3431 -2.6488 -0.3095 31 1 1.1102 -2.1349 -1.1995 32 1 -0.1274 -3.8842 -2.4482 33 1 -0.1274 -2.3426 -3.3387 34 1 -1.9535 -3.5961 -4.4368 35 1 -6.1086 -5.3460 -3.9608 36 1 -7.7510 -6.3203 -6.6051 37 1 -9.5065 -7.7355 -8.4340 38 1 -8.9897 -8.6482 -5.1592 39 1 -8.2166 -9.9112 -7.0900 40 1 -5.0568 -7.9063 -11.2797 41 1 -3.8399 -6.6802 -9.4151 42 1 -3.2740 -5.5637 -7.8900 43 1 -2.1673 -0.9001 -3.3380 44 1 -3.6203 -1.4137 -2.4477 45 1 -2.3828 -1.2061 -0.3086 46 1 -2.3827 0.3354 -1.1990 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081502_17088084.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:21:18 Heat of formation + Delta-G solvation = 131.411746 kcal Electronic energy + Delta-G solvation = -29528.372028 eV Core-core repulsion = 25437.117013 eV Total energy + Delta-G solvation = -4091.255015 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.133 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -43.58907 -43.21883 -41.62945 -40.12854 -39.20297 -38.38086 -36.60640 -35.75027 -33.98355 -33.81170 -32.27084 -31.24105 -28.73427 -26.65781 -26.28047 -26.12388 -25.36471 -24.39717 -23.52677 -22.98909 -21.48696 -21.40868 -21.20320 -20.32389 -19.95454 -19.77802 -19.58364 -18.50723 -18.00323 -17.83994 -17.74319 -17.50815 -17.18878 -16.94378 -16.64164 -16.53800 -16.16377 -16.12313 -15.89499 -15.57707 -15.51056 -15.28970 -14.98003 -14.78619 -14.60544 -14.51675 -14.41699 -14.19088 -14.06746 -13.66378 -13.52176 -13.28872 -13.25559 -13.21087 -12.70779 -12.45566 -12.38104 -11.73454 -11.58897 -11.39287 -11.07302 -10.24544 -9.90075 -5.50616 -1.85070 -1.20518 -0.89894 -0.69190 -0.24613 0.20971 0.45024 0.66714 0.67836 0.71758 0.75471 0.84970 1.00732 1.09088 1.43177 1.47967 1.58465 1.66490 1.86775 1.90588 1.97427 2.02118 2.06668 2.21514 2.35046 2.40484 2.42134 2.56343 2.69550 2.72592 2.82693 2.85130 2.88277 2.92067 3.10697 3.12508 3.16015 3.29710 3.46080 3.54019 3.61467 3.63642 3.70193 4.03437 4.13542 4.16921 4.41234 4.44132 4.54494 5.07370 5.25534 5.69199 5.71657 5.97451 Molecular weight = 362.13amu Principal moments of inertia in cm(-1) A = 0.021493 B = 0.002106 C = 0.001992 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1302.464885 B =13294.234912 C =14053.396266 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.437 0.563 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.137 4.137 8 C -0.127 4.127 9 C 0.140 3.860 10 H 0.098 0.902 11 N -0.713 5.713 12 C 0.587 3.413 13 O -0.522 6.522 14 C -0.002 4.002 15 C 0.133 3.867 16 N -0.444 5.444 17 C 0.191 3.809 18 C -0.094 4.094 19 C -0.184 4.184 20 C -0.053 4.053 21 O -0.525 6.525 22 Si 0.688 3.312 23 S 0.198 5.802 24 C -0.221 4.221 25 C -0.109 4.109 26 C 0.065 3.935 27 N -0.405 5.405 28 C -0.132 4.132 29 C -0.139 4.139 30 H 0.093 0.907 31 H 0.095 0.905 32 H 0.095 0.905 33 H 0.084 0.916 34 H 0.415 0.585 35 H 0.187 0.813 36 H 0.158 0.842 37 H 0.370 0.630 38 H -0.241 1.241 39 H -0.251 1.251 40 H 0.176 0.824 41 H 0.153 0.847 42 H 0.181 0.819 43 H 0.079 0.921 44 H 0.092 0.908 45 H 0.092 0.908 46 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 25.410 21.565 20.773 39.271 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.265 0.735 3 H 0.266 0.734 4 H 0.263 0.737 5 C -0.080 4.080 6 H 0.161 0.839 7 C -0.176 4.176 8 C -0.166 4.166 9 C 0.035 3.965 10 H 0.116 0.884 11 N -0.365 5.365 12 C 0.372 3.628 13 O -0.397 6.397 14 C -0.142 4.142 15 C -0.027 4.027 16 N -0.159 5.159 17 C 0.050 3.950 18 C -0.109 4.109 19 C -0.306 4.306 20 C -0.163 4.163 21 O -0.331 6.331 22 Si 0.585 3.415 23 S 0.465 5.535 24 C -0.356 4.356 25 C -0.138 4.138 26 C -0.101 4.101 27 N -0.121 5.121 28 C -0.171 4.171 29 C -0.177 4.177 30 H 0.111 0.889 31 H 0.114 0.886 32 H 0.113 0.887 33 H 0.102 0.898 34 H 0.252 0.748 35 H 0.204 0.796 36 H 0.174 0.826 37 H 0.217 0.783 38 H -0.164 1.164 39 H -0.175 1.175 40 H 0.193 0.807 41 H 0.170 0.830 42 H 0.198 0.802 43 H 0.098 0.902 44 H 0.111 0.889 45 H 0.111 0.889 46 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 23.146 20.631 21.221 37.572 hybrid contribution 1.018 0.944 -0.574 1.503 sum 24.164 21.575 20.646 38.414 Atomic orbital electron populations 1.42648 1.21150 1.20714 1.18859 0.73465 0.73402 0.73739 1.23598 0.99708 0.97450 0.87259 0.83855 1.22018 1.02733 0.90849 1.01977 1.21769 0.94458 1.03068 0.97266 1.21046 0.93014 0.92412 0.90069 0.88422 1.45745 1.17852 1.55933 1.16954 1.17571 0.81434 0.77763 0.86009 1.90857 1.56289 1.59426 1.33144 1.21863 0.94881 1.03058 0.94380 1.23868 0.93076 0.88978 0.96824 1.68452 1.33015 1.15179 0.99216 1.20633 0.91000 0.91800 0.91613 1.17090 0.93658 1.06043 0.94111 1.25022 1.00077 1.03355 1.02114 1.25259 0.79879 1.14707 0.96497 1.86727 1.33506 1.47944 1.64883 0.94335 0.90041 0.74404 0.82686 1.83394 1.11788 1.52831 1.05499 1.25619 0.97366 1.07872 1.04744 1.20069 1.01179 1.00934 0.91657 1.23753 0.94464 0.94670 0.97209 1.68217 1.33280 1.11808 0.98805 1.21943 1.03627 0.95011 0.96528 1.22046 0.89236 1.04074 1.02355 0.88891 0.88611 0.88673 0.89761 0.74845 0.79573 0.82563 0.78264 1.16441 1.17510 0.80665 0.82984 0.80178 0.90230 0.88934 0.88937 0.88864 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.02 4.15 -4.66 -0.02 24.00 16 2 H 0.44 -17.21 8.96 -39.30 -0.35 -17.56 16 3 H 0.44 -17.12 8.96 -39.29 -0.35 -17.47 16 4 H 0.43 -16.76 8.90 -39.29 -0.35 -17.11 16 5 C 0.02 -0.75 3.03 -67.71 -0.20 -0.96 16 6 H 0.14 -4.58 8.14 -51.93 -0.42 -5.01 16 7 C -0.14 3.88 5.43 -26.73 -0.15 3.73 16 8 C -0.13 2.93 5.39 -26.73 -0.14 2.78 16 9 C 0.14 -2.73 2.45 -67.93 -0.17 -2.89 16 10 H 0.10 -1.75 7.58 -51.93 -0.39 -2.15 16 11 N -0.71 11.04 5.07 -54.75 -0.28 10.76 16 12 C 0.59 -6.65 7.77 -12.33 -0.10 -6.74 16 13 O -0.52 4.59 15.99 5.32 0.09 4.68 16 14 C 0.00 0.02 6.75 -82.84 -0.56 -0.53 16 15 C 0.13 -1.21 10.76 -17.03 -0.18 -1.39 16 16 N -0.44 3.51 6.32 -9.28 -0.06 3.45 16 17 C 0.19 -1.61 6.73 -82.67 -0.56 -2.16 16 18 C -0.09 0.73 5.79 -106.64 -0.62 0.11 16 19 C -0.18 1.20 4.47 -35.56 -0.16 1.04 16 20 C -0.05 0.30 2.44 36.01 0.09 0.39 16 21 O -0.52 2.31 12.76 -35.23 -0.45 1.86 16 22 Si 0.69 -4.14 32.40 -169.99 -5.51 -9.65 16 23 S 0.20 -1.45 22.13 -107.50 -2.38 -3.83 16 24 C -0.22 1.92 11.19 28.94 0.32 2.25 16 25 C -0.11 1.01 9.60 -40.83 -0.39 0.62 16 26 C 0.06 -0.67 10.68 -17.00 -0.18 -0.85 16 27 N -0.40 4.24 9.69 -9.35 -0.09 4.15 16 28 C -0.13 2.79 5.49 -26.74 -0.15 2.65 16 29 C -0.14 3.76 5.43 -26.73 -0.15 3.62 16 30 H 0.09 -2.61 8.14 -51.93 -0.42 -3.03 16 31 H 0.10 -2.78 8.14 -51.93 -0.42 -3.21 16 32 H 0.09 -1.99 8.14 -51.93 -0.42 -2.42 16 33 H 0.08 -1.95 8.14 -51.92 -0.42 -2.37 16 34 H 0.41 -6.69 7.94 -40.82 -0.32 -7.02 16 35 H 0.19 -1.92 7.63 -52.49 -0.40 -2.32 16 36 H 0.16 -0.87 5.31 -51.93 -0.28 -1.15 16 37 H 0.37 -2.61 7.98 45.56 0.36 -2.24 16 38 H -0.24 0.83 7.11 56.52 0.40 1.24 16 39 H -0.25 1.09 7.11 56.52 0.40 1.49 16 40 H 0.18 -1.86 8.06 -52.49 -0.42 -2.28 16 41 H 0.15 -1.86 6.79 -52.49 -0.36 -2.21 16 42 H 0.18 -2.36 6.61 -52.48 -0.35 -2.71 16 43 H 0.08 -1.68 8.14 -51.92 -0.42 -2.11 16 44 H 0.09 -1.60 8.14 -51.93 -0.42 -2.02 16 45 H 0.09 -2.49 8.14 -51.93 -0.42 -2.91 16 46 H 0.09 -2.58 8.14 -51.93 -0.42 -3.00 16 LS Contribution 384.11 15.07 5.79 5.79 Total: 1.00 -42.31 384.11 -12.41 -54.71 By element: Atomic # 1 Polarization: -91.38 SS G_CDS: -6.21 Total: -97.59 kcal Atomic # 6 Polarization: 4.95 SS G_CDS: -3.28 Total: 1.66 kcal Atomic # 7 Polarization: 42.82 SS G_CDS: -0.45 Total: 42.37 kcal Atomic # 8 Polarization: 6.90 SS G_CDS: -0.36 Total: 6.54 kcal Atomic # 14 Polarization: -4.14 SS G_CDS: -5.51 Total: -9.65 kcal Atomic # 16 Polarization: -1.45 SS G_CDS: -2.38 Total: -3.83 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -42.31 -12.41 -54.71 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081502_17088084.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 186.126 kcal (2) G-P(sol) polarization free energy of solvation -42.308 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 143.817 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.405 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -54.714 kcal (6) G-S(sol) free energy of system = (1) + (5) 131.412 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds