Wall clock time and date at job start Mon Mar 8 2021 09:34:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00901 * 1 3 3 H 1.00904 * 109.46618 * 1 2 4 4 H 1.00898 * 109.46800 * 240.00114 * 1 2 3 5 5 C 1.46896 * 109.47223 * 119.99831 * 1 2 3 6 6 H 1.09001 * 109.46937 * 180.02562 * 5 1 2 7 7 C 1.52999 * 109.47195 * 299.99931 * 5 1 2 8 8 C 1.52998 * 109.47217 * 180.02562 * 7 5 1 9 9 C 1.52998 * 109.47084 * 300.00262 * 8 7 5 10 10 H 1.09006 * 109.47150 * 299.99554 * 9 8 7 11 11 N 1.46507 * 109.47024 * 180.02562 * 9 8 7 12 12 C 1.34781 * 119.99864 * 155.00299 * 11 9 8 13 13 O 1.21588 * 119.99876 * 359.97438 * 12 11 9 14 14 C 1.47582 * 119.99641 * 180.02562 * 12 11 9 15 15 C 1.40267 * 120.44479 * 179.72546 * 14 12 11 16 16 C 1.36934 * 118.51492 * 179.72840 * 15 14 12 17 17 C 1.39624 * 119.34579 * 0.55641 * 16 15 14 18 18 C 1.47958 * 119.57104 * 179.67313 * 17 16 15 19 19 C 1.34655 * 122.87657 * 132.30424 * 18 17 16 20 20 C 1.50697 * 124.74955 * 359.97438 * 19 18 17 21 21 O 1.42895 * 109.47061 * 321.49170 * 20 19 18 22 22 Si 1.86304 * 109.47435 * 201.49049 * 20 19 18 23 23 S 1.70637 * 110.50254 * 180.02562 * 19 18 17 24 24 C 1.75726 * 91.71103 * 359.97438 * 23 19 18 25 25 C 1.33100 * 109.80097 * 359.72806 * 24 23 19 26 26 N 1.32918 * 120.85694 * 359.70024 * 17 16 15 27 27 C 1.31539 * 121.60835 * 0.02562 * 26 17 16 28 28 C 1.52999 * 109.47307 * 59.99793 * 9 8 7 29 29 C 1.52998 * 109.47124 * 60.00204 * 5 1 2 30 30 H 1.09006 * 109.47211 * 60.00363 * 7 5 1 31 31 H 1.09002 * 109.47446 * 300.00195 * 7 5 1 32 32 H 1.08995 * 109.47338 * 179.97438 * 8 7 5 33 33 H 1.09007 * 109.47251 * 59.99862 * 8 7 5 34 34 H 0.96993 * 120.00064 * 334.99319 * 11 9 8 35 35 H 1.08005 * 120.74140 * 359.97438 * 15 14 12 36 36 H 1.08000 * 120.33152 * 180.25360 * 16 15 14 37 37 H 1.08997 * 109.46920 * 81.49209 * 20 19 18 38 38 H 0.96697 * 114.00313 * 299.99275 * 21 20 19 39 39 H 1.48497 * 110.00111 * 179.97438 * 22 20 19 40 40 H 1.48503 * 109.99880 * 301.32376 * 22 20 19 41 41 H 1.08003 * 125.09973 * 179.97438 * 24 23 19 42 42 H 1.07995 * 123.12645 * 180.24140 * 25 24 23 43 43 H 1.08001 * 119.71346 * 180.02562 * 27 26 17 44 44 H 1.09007 * 109.47122 * 60.00342 * 28 9 8 45 45 H 1.09002 * 109.47446 * 179.97438 * 28 9 8 46 46 H 1.08995 * 109.47372 * 59.99608 * 29 5 1 47 47 H 1.09006 * 109.47150 * 299.99556 * 29 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3363 0.9514 0.0000 4 1 -0.3363 -0.4756 0.8239 5 6 -0.4897 -0.6924 -1.1994 6 1 -1.5797 -0.6920 -1.1996 7 6 0.0203 0.0288 -2.4486 8 6 -0.4903 -0.6920 -3.6979 9 6 0.0192 -2.1347 -3.6982 10 1 1.1092 -2.1351 -3.6985 11 7 -0.4692 -2.8247 -4.8948 12 6 0.2073 -3.8817 -5.3864 13 8 1.2231 -4.2622 -4.8372 14 6 -0.2844 -4.5764 -6.5921 15 6 0.4153 -5.6738 -7.1151 16 6 -0.0795 -6.2925 -8.2321 17 6 -1.2502 -5.8095 -8.8199 18 6 -1.7852 -6.4697 -10.0312 19 6 -3.0801 -6.8140 -10.1644 20 6 -4.1426 -6.5810 -9.1214 21 8 -3.5950 -6.8169 -7.8228 22 14 -5.5673 -7.7449 -9.4154 23 16 -3.3494 -7.5525 -11.6790 24 6 -1.6581 -7.3791 -12.1233 25 6 -0.9916 -6.7835 -11.1371 26 7 -1.8900 -4.7640 -8.3059 27 6 -1.4496 -4.1463 -7.2313 28 6 -0.4908 -2.8559 -2.4490 29 6 0.0203 -2.1349 -1.1994 30 1 1.1103 0.0288 -2.4487 31 1 -0.3430 1.0565 -2.4486 32 1 -0.1274 -0.1779 -4.5878 33 1 -1.5803 -0.6916 -3.6976 34 1 -1.2794 -2.5210 -5.3330 35 1 1.3218 -6.0255 -6.6450 36 1 0.4335 -7.1426 -8.6570 37 1 -4.4951 -5.5517 -9.1856 38 1 -3.2610 -7.7151 -7.6939 39 1 -6.6217 -7.5255 -8.3929 40 1 -6.1253 -7.5314 -10.7750 41 1 -1.2252 -7.7034 -13.0581 42 1 0.0653 -6.5669 -11.1857 43 1 -1.9940 -3.2999 -6.8393 44 1 -1.5809 -2.8556 -2.4488 45 1 -0.1283 -3.8839 -2.4494 46 1 -0.3430 -2.6488 -0.3095 47 1 1.1103 -2.1350 -1.1995 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081502_17119696.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:34:50 Heat of formation + Delta-G solvation = 116.683219 kcal Electronic energy + Delta-G solvation = -29696.445043 eV Core-core repulsion = 25669.977261 eV Total energy + Delta-G solvation = -4026.467781 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.137 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -43.54805 -42.53913 -41.39866 -39.82597 -39.10506 -38.01090 -36.06200 -34.38325 -33.97389 -33.55252 -32.10680 -31.08813 -28.21604 -26.23582 -26.06515 -25.53126 -25.18778 -24.01733 -23.42481 -22.79931 -21.41280 -21.20605 -21.14774 -20.07838 -19.81283 -19.49369 -19.03941 -18.40888 -17.92361 -17.55861 -17.35000 -17.24227 -16.93619 -16.75908 -16.70170 -16.16051 -16.11860 -15.79200 -15.73368 -15.46209 -15.27797 -15.12896 -14.82523 -14.75476 -14.61463 -14.49524 -14.39857 -14.20811 -14.15836 -13.99631 -13.50122 -13.24275 -13.09747 -12.81472 -12.21919 -12.19352 -11.71329 -11.43726 -11.38489 -11.22134 -10.93545 -10.30339 -9.90144 -5.67926 -1.38515 -1.20617 -0.63105 -0.45351 -0.12641 0.25564 0.65243 0.67412 0.69634 0.73266 0.77687 0.87448 0.99816 1.09596 1.34523 1.48453 1.58486 1.67323 1.96597 2.04753 2.11492 2.22577 2.33175 2.37028 2.41904 2.54378 2.69750 2.74439 2.83316 2.84483 2.85693 2.93367 3.02857 3.13039 3.15636 3.26247 3.29524 3.49228 3.54869 3.65041 3.67786 3.76291 3.83455 3.94924 4.13222 4.21177 4.26557 4.34613 4.56818 4.68279 4.80792 5.25370 5.84158 6.05636 6.15950 Molecular weight = 361.14amu Principal moments of inertia in cm(-1) A = 0.018641 B = 0.002210 C = 0.002078 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1501.683972 B =12664.735982 C =13470.341243 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.434 0.566 3 H 0.437 0.563 4 H 0.437 0.563 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.137 4.137 8 C -0.128 4.128 9 C 0.142 3.858 10 H 0.097 0.903 11 N -0.728 5.728 12 C 0.574 3.426 13 O -0.530 6.530 14 C -0.207 4.207 15 C -0.010 4.010 16 C -0.166 4.166 17 C 0.240 3.760 18 C -0.062 4.062 19 C -0.219 4.219 20 C -0.015 4.015 21 O -0.529 6.529 22 Si 0.647 3.353 23 S 0.192 5.808 24 C -0.218 4.218 25 C -0.117 4.117 26 N -0.458 5.458 27 C 0.147 3.853 28 C -0.131 4.131 29 C -0.139 4.139 30 H 0.092 0.908 31 H 0.095 0.905 32 H 0.094 0.906 33 H 0.083 0.917 34 H 0.404 0.596 35 H 0.148 0.852 36 H 0.145 0.855 37 H 0.127 0.873 38 H 0.374 0.626 39 H -0.235 1.235 40 H -0.235 1.235 41 H 0.173 0.827 42 H 0.147 0.853 43 H 0.152 0.848 44 H 0.079 0.921 45 H 0.092 0.908 46 H 0.093 0.907 47 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.582 19.686 28.756 35.294 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.263 0.737 3 H 0.265 0.735 4 H 0.266 0.734 5 C -0.080 4.080 6 H 0.161 0.839 7 C -0.176 4.176 8 C -0.167 4.167 9 C 0.036 3.964 10 H 0.115 0.885 11 N -0.381 5.381 12 C 0.362 3.638 13 O -0.407 6.407 14 C -0.212 4.212 15 C -0.036 4.036 16 C -0.187 4.187 17 C 0.101 3.899 18 C -0.077 4.077 19 C -0.339 4.339 20 C -0.129 4.129 21 O -0.333 6.333 22 Si 0.547 3.453 23 S 0.458 5.542 24 C -0.354 4.354 25 C -0.146 4.146 26 N -0.166 5.166 27 C -0.013 4.013 28 C -0.171 4.171 29 C -0.177 4.177 30 H 0.111 0.889 31 H 0.114 0.886 32 H 0.113 0.887 33 H 0.102 0.898 34 H 0.240 0.760 35 H 0.165 0.835 36 H 0.163 0.837 37 H 0.144 0.856 38 H 0.221 0.779 39 H -0.158 1.158 40 H -0.159 1.159 41 H 0.190 0.810 42 H 0.165 0.835 43 H 0.169 0.831 44 H 0.097 0.903 45 H 0.111 0.889 46 H 0.111 0.889 47 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 3.139 19.507 27.664 33.995 hybrid contribution 2.042 1.197 1.064 2.595 sum 5.181 20.704 28.727 35.787 Atomic orbital electron populations 1.42648 1.21348 1.20665 1.18706 0.73740 0.73467 0.73396 1.23592 1.04464 0.95891 0.84054 0.83862 1.22015 1.03340 1.00159 0.92063 1.21778 1.02474 0.94612 0.97787 1.20992 1.00739 0.90212 0.84408 0.88531 1.45853 1.29860 1.32685 1.29711 1.18074 0.82985 0.79388 0.83345 1.90819 1.24336 1.65061 1.60481 1.20792 1.00081 1.01181 0.99196 1.21346 0.97986 0.91224 0.93015 1.21851 0.97401 1.02239 0.97185 1.19442 0.89324 0.89681 0.91406 1.17303 0.92375 1.03580 0.94453 1.24625 0.99025 1.07549 1.02704 1.24402 0.99389 1.07133 0.81938 1.86517 1.81887 1.35764 1.29136 0.94997 0.79212 0.88493 0.82636 1.83538 1.08036 1.55062 1.07566 1.25755 0.97138 1.07850 1.04627 1.20150 1.01240 1.00940 0.92314 1.67772 1.30633 1.07474 1.10694 1.22769 0.91373 0.96774 0.90383 1.21952 1.02089 1.01321 0.91710 1.22057 1.03288 0.90534 1.01843 0.88907 0.88637 0.88723 0.89826 0.76032 0.83465 0.83735 0.85632 0.77884 1.15797 1.15870 0.80992 0.83507 0.83051 0.90265 0.88937 0.88870 0.88985 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 23.85 4.15 -4.67 -0.02 23.83 16 2 H 0.43 -16.64 8.90 -39.29 -0.35 -16.99 16 3 H 0.44 -17.10 8.96 -39.29 -0.35 -17.46 16 4 H 0.44 -17.02 8.96 -39.29 -0.35 -17.37 16 5 C 0.02 -0.75 3.02 -67.72 -0.20 -0.95 16 6 H 0.14 -4.55 8.14 -51.93 -0.42 -4.97 16 7 C -0.14 3.83 5.43 -26.73 -0.15 3.69 16 8 C -0.13 2.92 5.39 -26.73 -0.14 2.78 16 9 C 0.14 -2.72 2.45 -67.93 -0.17 -2.88 16 10 H 0.10 -1.67 7.58 -51.93 -0.39 -2.06 16 11 N -0.73 11.33 5.03 -54.83 -0.28 11.06 16 12 C 0.57 -6.17 7.74 -12.45 -0.10 -6.27 16 13 O -0.53 3.96 16.07 5.29 0.08 4.04 16 14 C -0.21 1.98 5.89 -104.79 -0.62 1.36 16 15 C -0.01 0.08 9.65 -39.29 -0.38 -0.29 16 16 C -0.17 1.41 9.54 -39.54 -0.38 1.04 16 17 C 0.24 -1.69 5.05 -82.90 -0.42 -2.11 16 18 C -0.06 0.42 5.46 -106.64 -0.58 -0.16 16 19 C -0.22 1.53 5.61 -35.58 -0.20 1.33 16 20 C -0.02 0.11 2.38 36.00 0.09 0.20 16 21 O -0.53 4.07 10.41 -35.23 -0.37 3.71 16 22 Si 0.65 -4.97 31.13 -169.99 -5.29 -10.26 16 23 S 0.19 -1.40 20.48 -107.50 -2.20 -3.60 16 24 C -0.22 1.70 11.20 28.94 0.32 2.02 16 25 C -0.12 0.88 9.88 -40.83 -0.40 0.48 16 26 N -0.46 3.14 8.73 -9.46 -0.08 3.05 16 27 C 0.15 -1.42 10.71 -17.14 -0.18 -1.60 16 28 C -0.13 2.74 5.50 -26.71 -0.15 2.59 16 29 C -0.14 3.72 5.43 -26.71 -0.15 3.57 16 30 H 0.09 -2.57 8.14 -51.93 -0.42 -2.99 16 31 H 0.10 -2.75 8.14 -51.93 -0.42 -3.17 16 32 H 0.09 -1.97 8.14 -51.93 -0.42 -2.39 16 33 H 0.08 -1.93 8.14 -51.92 -0.42 -2.36 16 34 H 0.40 -6.96 6.65 -40.82 -0.27 -7.23 16 35 H 0.15 -1.34 7.72 -52.48 -0.41 -1.75 16 36 H 0.14 -1.45 8.05 -52.49 -0.42 -1.87 16 37 H 0.13 -0.81 7.96 -51.93 -0.41 -1.23 16 38 H 0.37 -3.95 8.70 45.56 0.40 -3.56 16 39 H -0.23 1.15 7.11 56.52 0.40 1.55 16 40 H -0.23 1.30 7.11 56.52 0.40 1.70 16 41 H 0.17 -1.63 8.06 -52.48 -0.42 -2.05 16 42 H 0.15 -1.32 8.06 -52.49 -0.42 -1.74 16 43 H 0.15 -2.00 6.41 -52.49 -0.34 -2.34 16 44 H 0.08 -1.66 8.14 -51.92 -0.42 -2.08 16 45 H 0.09 -1.54 8.14 -51.93 -0.42 -1.97 16 46 H 0.09 -2.55 8.14 -51.93 -0.42 -2.97 16 47 H 0.09 -2.44 8.14 -51.93 -0.42 -2.86 16 LS Contribution 389.84 15.07 5.87 5.87 Total: 1.00 -42.85 389.84 -12.83 -55.67 By element: Atomic # 1 Polarization: -91.41 SS G_CDS: -6.75 Total: -98.16 kcal Atomic # 6 Polarization: 8.59 SS G_CDS: -3.80 Total: 4.79 kcal Atomic # 7 Polarization: 38.32 SS G_CDS: -0.38 Total: 37.95 kcal Atomic # 8 Polarization: 8.03 SS G_CDS: -0.28 Total: 7.75 kcal Atomic # 14 Polarization: -4.97 SS G_CDS: -5.29 Total: -10.26 kcal Atomic # 16 Polarization: -1.40 SS G_CDS: -2.20 Total: -3.60 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -42.85 -12.83 -55.67 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081502_17119696.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 172.356 kcal (2) G-P(sol) polarization free energy of solvation -42.846 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 129.510 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.827 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -55.672 kcal (6) G-S(sol) free energy of system = (1) + (5) 116.683 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds