Wall clock time and date at job start Mon Mar 8 2021 09:45:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00893 * 1 3 3 H 1.00896 * 109.47279 * 1 2 4 4 H 1.00905 * 109.47296 * 240.00311 * 1 2 3 5 5 C 1.46902 * 109.47905 * 120.00395 * 1 2 3 6 6 H 1.08993 * 112.85357 * 191.19364 * 5 1 2 7 7 C 1.53788 * 113.68456 * 322.46392 * 5 1 2 8 8 C 1.53788 * 87.08019 * 89.12779 * 7 5 1 9 9 H 1.09000 * 113.68445 * 270.86897 * 8 7 5 10 10 C 1.50691 * 113.61372 * 139.97953 * 8 7 5 11 11 C 1.38000 * 119.93937 * 142.50034 * 10 8 7 12 12 C 1.39357 * 119.87700 * 180.02562 * 11 10 8 13 13 C 1.48399 * 120.11986 * 179.97438 * 12 11 10 14 14 C 1.39307 * 120.53192 * 0.02562 * 13 12 11 15 15 N 1.31749 * 120.59247 * 179.97438 * 14 13 12 16 16 C 1.31886 * 121.85165 * 359.75947 * 15 14 13 17 17 C 1.38313 * 121.03077 * 0.53157 * 16 15 14 18 18 C 1.50696 * 120.36240 * 179.72417 * 17 16 15 19 19 O 1.42903 * 109.47131 * 119.72310 * 18 17 16 20 20 Si 1.86305 * 109.47185 * 359.72851 * 18 17 16 21 21 C 1.38412 * 119.28047 * 359.45630 * 17 16 15 22 22 C 1.39316 * 119.76052 * 0.25179 * 12 11 10 23 23 C 1.38033 * 119.87486 * 359.51621 * 22 12 11 24 24 C 1.38299 * 120.12302 * 0.46275 * 23 22 12 25 25 C 1.53782 * 113.61345 * 59.99811 * 5 1 2 26 26 H 1.08994 * 113.61544 * 334.57920 * 7 5 1 27 27 H 1.08995 * 113.61126 * 203.67177 * 7 5 1 28 28 H 1.07997 * 120.06203 * 359.97438 * 11 10 8 29 29 H 1.07996 * 119.70377 * 359.97438 * 14 13 12 30 30 H 1.08000 * 119.48696 * 180.26593 * 16 15 14 31 31 H 1.08999 * 109.47358 * 239.72670 * 18 17 16 32 32 H 0.96700 * 114.00311 * 300.00591 * 19 18 17 33 33 H 1.48497 * 110.00233 * 179.97438 * 20 18 17 34 34 H 1.48492 * 109.99800 * 301.31995 * 20 18 17 35 35 H 1.07995 * 120.84571 * 180.29628 * 21 17 16 36 36 H 1.08000 * 120.05990 * 179.72993 * 22 12 11 37 37 H 1.08002 * 119.93997 * 180.20872 * 23 22 12 38 38 H 1.08001 * 119.88193 * 179.76433 * 24 23 22 39 39 H 1.08996 * 113.61599 * 156.25886 * 25 5 1 40 40 H 1.08997 * 113.61385 * 25.34842 * 25 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0089 0.0000 0.0000 3 1 -0.3363 0.9513 0.0000 4 1 -0.3364 -0.4756 0.8239 5 6 -0.4899 -0.6926 -1.1993 6 1 -1.5599 -0.5590 -1.3579 7 6 0.3570 -0.4270 -2.4553 8 6 1.2101 -1.6373 -2.0401 9 1 2.0399 -1.3825 -1.3808 10 6 1.6279 -2.5069 -3.1977 11 6 2.8824 -3.0818 -3.2095 12 6 3.2677 -3.8853 -4.2810 13 6 4.6156 -4.5058 -4.2995 14 6 5.5070 -4.2933 -3.2503 15 7 6.7038 -4.8440 -3.2653 16 6 7.1032 -5.6140 -4.2588 17 6 6.2787 -5.8682 -5.3398 18 6 6.7527 -6.7453 -6.4698 19 8 5.8879 -7.8766 -6.5897 20 14 8.4884 -7.3250 -6.1198 21 6 5.0113 -5.3127 -5.3699 22 6 2.3849 -4.0993 -5.3373 23 6 1.1308 -3.5232 -5.3128 24 6 0.7535 -2.7270 -4.2468 25 6 -0.0310 -2.1572 -1.2955 26 1 0.8975 0.5191 -2.4254 27 1 -0.1869 -0.5756 -3.3880 28 1 3.5646 -2.9087 -2.3904 29 1 5.2144 -3.6716 -2.4171 30 1 8.0911 -6.0495 -4.2298 31 1 6.7399 -6.1779 -7.4003 32 1 5.8500 -8.4286 -5.7966 33 1 8.9674 -8.1915 -7.2266 34 1 9.3916 -6.1570 -5.9613 35 1 4.3449 -5.4983 -6.1992 36 1 2.6801 -4.7176 -6.1722 37 1 0.4444 -3.6911 -6.1296 38 1 -0.2273 -2.2751 -4.2335 39 1 -0.6810 -2.7788 -1.9113 40 1 0.1963 -2.6078 -0.3295 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081518_14315888.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:45:50 Heat of formation + Delta-G solvation = 174.186633 kcal Electronic energy + Delta-G solvation = -21389.570132 eV Core-core repulsion = 18255.390740 eV Total energy + Delta-G solvation = -3134.179392 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 284.139 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -44.22459 -42.51778 -41.11967 -38.70208 -38.31582 -35.34648 -34.40892 -33.39100 -31.38558 -29.17256 -28.52689 -27.84519 -26.25023 -25.25745 -23.98169 -23.35200 -22.23303 -21.58278 -21.46160 -19.84740 -19.39355 -19.02245 -18.72478 -18.34808 -17.87765 -17.62254 -17.19820 -16.90155 -16.43104 -16.12323 -16.03916 -15.87127 -15.67000 -15.61197 -15.16004 -14.88565 -14.71523 -14.45216 -14.15243 -14.07171 -13.84920 -13.49976 -13.20741 -13.12666 -12.67548 -12.20663 -11.50819 -11.31250 -11.13415 -11.04361 -10.23117 -5.72256 -1.53922 -1.26018 -0.92263 -0.74624 -0.27630 0.39512 0.53677 0.59788 0.79650 0.95101 1.28892 1.29464 1.32727 1.52868 1.59601 1.78756 2.02690 2.10512 2.27265 2.33607 2.36790 2.48666 2.51141 2.60653 2.64918 2.74610 2.79337 2.81600 2.90017 2.95800 2.98731 3.08590 3.23005 3.30860 3.50288 3.54417 3.70217 3.79031 3.82965 3.99552 4.13925 4.22135 4.30670 4.47460 4.65600 4.74431 5.77560 6.01723 Molecular weight = 284.14amu Principal moments of inertia in cm(-1) A = 0.033672 B = 0.003560 C = 0.003300 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 831.354021 B = 7864.006959 C = 8483.739581 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.622 5.622 2 H 0.433 0.567 3 H 0.440 0.560 4 H 0.439 0.561 5 C -0.017 4.017 6 H 0.157 0.843 7 C -0.137 4.137 8 C -0.080 4.080 9 H 0.107 0.893 10 C -0.087 4.087 11 C -0.101 4.101 12 C -0.031 4.031 13 C -0.106 4.106 14 C 0.114 3.886 15 N -0.472 5.472 16 C 0.109 3.891 17 C -0.164 4.164 18 C -0.065 4.065 19 O -0.537 6.537 20 Si 0.686 3.314 21 C -0.038 4.038 22 C -0.100 4.100 23 C -0.106 4.106 24 C -0.114 4.114 25 C -0.133 4.133 26 H 0.097 0.903 27 H 0.129 0.871 28 H 0.127 0.873 29 H 0.157 0.843 30 H 0.161 0.839 31 H 0.120 0.880 32 H 0.381 0.619 33 H -0.247 1.247 34 H -0.253 1.253 35 H 0.142 0.858 36 H 0.131 0.869 37 H 0.132 0.868 38 H 0.124 0.876 39 H 0.127 0.873 40 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -18.997 17.401 18.491 31.711 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.020 5.020 2 H 0.262 0.738 3 H 0.269 0.731 4 H 0.268 0.732 5 C -0.122 4.122 6 H 0.174 0.826 7 C -0.174 4.174 8 C -0.098 4.098 9 H 0.125 0.875 10 C -0.087 4.087 11 C -0.119 4.119 12 C -0.031 4.031 13 C -0.108 4.108 14 C -0.043 4.043 15 N -0.179 5.179 16 C -0.047 4.047 17 C -0.167 4.167 18 C -0.176 4.176 19 O -0.342 6.342 20 Si 0.587 3.413 21 C -0.063 4.063 22 C -0.118 4.118 23 C -0.124 4.124 24 C -0.132 4.132 25 C -0.171 4.171 26 H 0.115 0.885 27 H 0.147 0.853 28 H 0.145 0.855 29 H 0.174 0.826 30 H 0.178 0.822 31 H 0.137 0.863 32 H 0.229 0.771 33 H -0.171 1.171 34 H -0.177 1.177 35 H 0.160 0.840 36 H 0.148 0.852 37 H 0.150 0.850 38 H 0.142 0.858 39 H 0.145 0.855 40 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -17.759 17.656 18.090 30.893 hybrid contribution -0.814 0.443 -0.752 1.193 sum -18.572 18.099 17.338 31.195 Atomic orbital electron populations 1.42236 1.21089 1.20611 1.18070 0.73823 0.73101 0.73154 1.24431 1.04030 0.98139 0.85586 0.82583 1.23708 0.96905 1.00132 0.96663 1.21761 0.96942 0.94705 0.96409 0.87495 1.19122 0.94518 0.99572 0.95472 1.21029 0.95764 0.97080 0.97998 1.18611 0.92371 0.97210 0.94954 1.19779 0.94551 0.99869 0.96600 1.22895 0.88598 0.96235 0.96612 1.67692 1.16158 1.07886 1.26129 1.22803 0.99240 0.93921 0.88692 1.21415 0.95853 1.01041 0.98347 1.24998 1.05790 0.88382 0.98471 1.86535 1.67621 1.37823 1.42215 0.94764 0.73902 0.84245 0.88409 1.21566 0.95241 0.92319 0.97203 1.21414 0.93498 0.98941 0.97979 1.21179 0.96267 0.96474 0.98513 1.20991 0.99241 0.99084 0.93863 1.23661 0.97839 0.91870 1.03703 0.88500 0.85339 0.85490 0.82553 0.82197 0.86317 0.77131 1.17131 1.17743 0.84000 0.85155 0.85019 0.85825 0.85466 0.88541 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.62 23.42 4.51 -3.97 -0.02 23.40 16 2 H 0.43 -16.59 8.01 -39.30 -0.31 -16.90 16 3 H 0.44 -17.34 9.02 -39.29 -0.35 -17.70 16 4 H 0.44 -17.23 9.02 -39.29 -0.35 -17.58 16 5 C -0.02 0.56 4.96 -66.90 -0.33 0.22 16 6 H 0.16 -5.05 8.14 -51.93 -0.42 -5.47 16 7 C -0.14 3.75 7.12 -25.91 -0.18 3.57 16 8 C -0.08 2.00 3.63 -90.96 -0.33 1.67 16 9 H 0.11 -2.89 7.66 -51.93 -0.40 -3.29 16 10 C -0.09 1.60 5.28 -104.67 -0.55 1.05 16 11 C -0.10 1.57 9.10 -39.25 -0.36 1.21 16 12 C -0.03 0.38 5.88 -104.90 -0.62 -0.24 16 13 C -0.11 1.10 5.89 -104.75 -0.62 0.48 16 14 C 0.11 -1.15 10.60 -17.19 -0.18 -1.33 16 15 N -0.47 3.57 10.35 -12.97 -0.13 3.44 16 16 C 0.11 -0.91 9.84 -17.50 -0.17 -1.08 16 17 C -0.16 1.47 5.39 -104.53 -0.56 0.90 16 18 C -0.06 0.58 2.83 36.00 0.10 0.68 16 19 O -0.54 4.47 12.78 -35.23 -0.45 4.02 16 20 Si 0.69 -6.03 29.82 -169.99 -5.07 -11.10 16 21 C -0.04 0.36 9.13 -38.95 -0.36 0.00 16 22 C -0.10 1.23 9.44 -39.26 -0.37 0.86 16 23 C -0.11 1.48 10.03 -39.63 -0.40 1.09 16 24 C -0.11 1.93 8.60 -39.52 -0.34 1.59 16 25 C -0.13 3.65 7.34 -25.91 -0.19 3.46 16 26 H 0.10 -2.73 8.14 -51.93 -0.42 -3.15 16 27 H 0.13 -3.23 6.30 -51.93 -0.33 -3.56 16 28 H 0.13 -2.21 6.23 -52.49 -0.33 -2.54 16 29 H 0.16 -2.09 6.23 -52.49 -0.33 -2.42 16 30 H 0.16 -1.57 4.88 -52.49 -0.26 -1.83 16 31 H 0.12 -1.02 7.96 -51.93 -0.41 -1.43 16 32 H 0.38 -4.58 8.70 45.56 0.40 -4.18 16 33 H -0.25 1.23 7.11 56.52 0.40 1.63 16 34 H -0.25 1.63 7.11 56.52 0.40 2.03 16 35 H 0.14 -1.47 6.33 -52.49 -0.33 -1.81 16 36 H 0.13 -1.60 6.28 -52.49 -0.33 -1.93 16 37 H 0.13 -1.93 8.06 -52.49 -0.42 -2.35 16 38 H 0.12 -2.45 6.65 -52.49 -0.35 -2.79 16 39 H 0.13 -3.17 7.72 -51.93 -0.40 -3.57 16 40 H 0.10 -2.73 8.14 -51.93 -0.42 -3.15 16 LS Contribution 320.21 15.07 4.83 4.83 Total: 1.00 -41.99 320.21 -11.28 -53.28 By element: Atomic # 1 Polarization: -87.03 SS G_CDS: -4.98 Total: -92.00 kcal Atomic # 6 Polarization: 19.60 SS G_CDS: -5.46 Total: 14.14 kcal Atomic # 7 Polarization: 26.99 SS G_CDS: -0.15 Total: 26.84 kcal Atomic # 8 Polarization: 4.47 SS G_CDS: -0.45 Total: 4.02 kcal Atomic # 14 Polarization: -6.03 SS G_CDS: -5.07 Total: -11.10 kcal Total LS contribution 4.83 Total: 4.83 kcal Total: -41.99 -11.28 -53.28 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081518_14315888.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 227.463 kcal (2) G-P(sol) polarization free energy of solvation -41.995 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 185.468 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.281 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -53.276 kcal (6) G-S(sol) free energy of system = (1) + (5) 174.187 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds