Wall clock time and date at job start Mon Mar 8 2021 09:48:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00901 * 1 3 3 H 1.00906 * 109.47114 * 1 2 4 4 H 1.00902 * 109.47309 * 240.00643 * 1 2 3 5 5 C 1.46901 * 109.47628 * 120.00217 * 1 2 3 6 6 H 1.09001 * 109.46874 * 300.00124 * 5 1 2 7 7 C 1.53000 * 109.46769 * 59.99844 * 5 1 2 8 8 C 1.52997 * 109.47060 * 180.02562 * 7 5 1 9 9 C 1.53006 * 109.47127 * 300.00449 * 8 7 5 10 10 H 1.09001 * 109.47002 * 299.99574 * 9 8 7 11 11 N 1.46504 * 109.46883 * 180.02562 * 9 8 7 12 12 C 1.38552 * 120.00180 * 84.99850 * 11 9 8 13 13 C 1.39703 * 120.48394 * 359.72133 * 12 11 9 14 14 C 1.38213 * 118.49742 * 179.80189 * 13 12 11 15 15 N 1.32398 * 119.29463 * 0.47138 * 14 13 12 16 16 C 1.32589 * 120.93124 * 359.74309 * 15 14 13 17 17 C 1.48313 * 119.18545 * 179.97438 * 16 15 14 18 18 C 1.39326 * 120.54438 * 180.02562 * 17 16 15 19 19 N 1.31735 * 120.59675 * 179.97438 * 18 17 16 20 20 C 1.31894 * 121.85283 * 0.02562 * 19 18 17 21 21 C 1.38323 * 121.03960 * 359.97438 * 20 19 18 22 22 C 1.50698 * 120.35559 * 180.02562 * 21 20 19 23 23 O 1.42900 * 109.47109 * 244.99412 * 22 21 20 24 24 Si 1.86302 * 109.47565 * 4.99702 * 22 21 20 25 25 C 1.38400 * 119.28335 * 359.78039 * 21 20 19 26 26 N 1.32565 * 121.63339 * 0.02819 * 16 15 14 27 27 C 1.52997 * 109.47164 * 59.99836 * 9 8 7 28 28 C 1.52996 * 109.47195 * 179.97438 * 5 1 2 29 29 H 1.09002 * 109.47398 * 300.00295 * 7 5 1 30 30 H 1.09001 * 109.47194 * 60.00475 * 7 5 1 31 31 H 1.08998 * 109.47533 * 59.99948 * 8 7 5 32 32 H 1.08996 * 109.47853 * 180.02562 * 8 7 5 33 33 H 0.97003 * 119.99624 * 264.99510 * 11 9 8 34 34 H 1.07998 * 120.75283 * 0.02562 * 13 12 11 35 35 H 1.07999 * 120.35616 * 180.19193 * 14 13 12 36 36 H 1.08006 * 119.69982 * 0.02562 * 18 17 16 37 37 H 1.08003 * 119.47607 * 179.97438 * 20 19 18 38 38 H 1.09006 * 109.46876 * 124.99555 * 22 21 20 39 39 H 0.96699 * 113.99334 * 59.99981 * 23 22 21 40 40 H 1.48494 * 110.00167 * 179.97438 * 24 22 21 41 41 H 1.48496 * 109.99828 * 301.32177 * 24 22 21 42 42 H 1.07996 * 120.84907 * 180.23126 * 25 21 20 43 43 H 1.09002 * 109.47045 * 180.02562 * 27 9 8 44 44 H 1.09001 * 109.47375 * 59.99966 * 27 9 8 45 45 H 1.08992 * 109.47554 * 299.99900 * 28 5 1 46 46 H 1.09004 * 109.47108 * 60.00150 * 28 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9514 0.0000 4 1 -0.3364 -0.4756 0.8239 5 6 -0.4898 -0.6925 -1.1994 6 1 -0.1265 -0.1787 -2.0894 7 6 0.0202 -2.1350 -1.1993 8 6 -0.4893 -2.8562 -2.4488 9 6 -2.0194 -2.8561 -2.4493 10 1 -2.3831 -3.3700 -1.5595 11 7 -2.5073 -3.5471 -3.6455 12 6 -2.6396 -4.9263 -3.6432 13 6 -2.3053 -5.6685 -2.5078 14 6 -2.4572 -7.0416 -2.5493 15 7 -2.9028 -7.6109 -3.6584 16 6 -3.2084 -6.8823 -4.7232 17 6 -3.7038 -7.5603 -5.9457 18 6 -4.0327 -6.8223 -7.0807 19 7 -4.4723 -7.4236 -8.1673 20 6 -4.6188 -8.7330 -8.2274 21 6 -4.3138 -9.5353 -7.1427 22 6 -4.4865 -11.0299 -7.2284 23 8 -5.5045 -11.4449 -6.3155 24 14 -4.9786 -11.4998 -8.9627 25 6 -3.8434 -8.9511 -5.9795 26 7 -3.0812 -5.5627 -4.7225 27 6 -2.5293 -1.4136 -2.4494 28 6 -2.0198 -0.6930 -1.1990 29 1 1.1102 -2.1351 -1.1993 30 1 -0.3431 -2.6488 -0.3093 31 1 -0.1257 -2.3423 -3.3386 32 1 -0.1265 -3.8839 -2.4486 33 1 -2.7377 -3.0391 -4.4390 34 1 -1.9399 -5.1800 -1.6166 35 1 -2.2107 -7.6443 -1.6876 36 1 -3.9255 -5.7477 -7.0699 37 1 -4.9827 -9.1858 -9.1378 38 1 -3.5469 -11.5195 -6.9721 39 1 -6.3698 -11.0475 -6.4841 40 1 -5.1514 -12.9714 -9.0606 41 1 -6.2415 -10.8136 -9.3359 42 1 -3.5940 -9.5537 -5.1188 43 1 -3.6193 -1.4135 -2.4494 44 1 -2.1656 -0.8996 -3.3392 45 1 -2.3827 -1.2070 -0.3090 46 1 -2.3834 0.3346 -1.1988 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081518_17085348.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:48:25 Heat of formation + Delta-G solvation = 175.951486 kcal Electronic energy + Delta-G solvation = -27314.817045 eV Core-core repulsion = 23517.823593 eV Total energy + Delta-G solvation = -3796.993452 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.172 amu Computer time = 2.06 seconds Orbital eigenvalues (eV) -43.68772 -42.94855 -41.83777 -40.23426 -38.55507 -37.30153 -35.43989 -34.55172 -34.15900 -33.86766 -32.03663 -30.85596 -27.83686 -27.03506 -26.41494 -25.86371 -25.44977 -24.16932 -23.70995 -22.93034 -21.53040 -21.31158 -20.19904 -19.98052 -19.83579 -18.93397 -18.51293 -18.30353 -17.72929 -17.66542 -17.56360 -17.11698 -17.06397 -16.80843 -16.75507 -16.26006 -16.02472 -15.81236 -15.52426 -15.46890 -15.20308 -14.91600 -14.81956 -14.67153 -14.61976 -14.36380 -14.01374 -13.79499 -13.47420 -13.21155 -13.16291 -12.72335 -12.46215 -12.36833 -11.39237 -11.23682 -11.16296 -10.98712 -10.74884 -10.22964 -5.49094 -1.47346 -1.31650 -0.58219 -0.50260 -0.17589 0.49934 0.55464 0.61445 0.70060 0.73730 1.06112 1.35678 1.45952 1.46085 1.54025 1.78770 1.81033 1.90730 1.93604 2.04385 2.17745 2.21511 2.29328 2.34264 2.43032 2.50940 2.64165 2.71018 2.72297 2.75465 2.80665 3.01017 3.03314 3.11526 3.13821 3.26914 3.29454 3.31646 3.36141 3.44509 3.58672 3.72727 3.88122 4.04094 4.10571 4.43835 4.49784 4.66153 4.89798 5.05933 5.41512 5.81499 6.22723 6.31793 Molecular weight = 329.17amu Principal moments of inertia in cm(-1) A = 0.033577 B = 0.002253 C = 0.002170 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 833.710875 B =12427.172554 C =12902.152028 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.438 0.562 3 H 0.438 0.562 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.140 4.140 8 C -0.138 4.138 9 C 0.150 3.850 10 H 0.091 0.909 11 N -0.712 5.712 12 C 0.444 3.556 13 C -0.302 4.302 14 C 0.188 3.812 15 N -0.546 5.546 16 C 0.417 3.583 17 C -0.109 4.109 18 C 0.156 3.844 19 N -0.481 5.481 20 C 0.125 3.875 21 C -0.180 4.180 22 C -0.069 4.069 23 O -0.526 6.526 24 Si 0.684 3.316 25 C 0.005 3.995 26 N -0.568 5.568 27 C -0.127 4.127 28 C -0.137 4.137 29 H 0.094 0.906 30 H 0.091 0.909 31 H 0.083 0.917 32 H 0.091 0.909 33 H 0.412 0.588 34 H 0.140 0.860 35 H 0.171 0.829 36 H 0.170 0.830 37 H 0.163 0.837 38 H 0.124 0.876 39 H 0.377 0.623 40 H -0.250 1.250 41 H -0.255 1.255 42 H 0.153 0.847 43 H 0.096 0.904 44 H 0.085 0.915 45 H 0.093 0.907 46 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 15.800 30.643 22.313 41.067 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.267 0.733 3 H 0.266 0.734 4 H 0.262 0.738 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.178 4.178 8 C -0.178 4.178 9 C 0.044 3.956 10 H 0.109 0.891 11 N -0.345 5.345 12 C 0.200 3.800 13 C -0.329 4.329 14 C 0.025 3.975 15 N -0.263 5.263 16 C 0.151 3.849 17 C -0.113 4.113 18 C -0.003 4.003 19 N -0.188 5.188 20 C -0.031 4.031 21 C -0.183 4.183 22 C -0.179 4.179 23 O -0.332 6.332 24 Si 0.584 3.416 25 C -0.022 4.022 26 N -0.291 5.291 27 C -0.165 4.165 28 C -0.176 4.176 29 H 0.113 0.887 30 H 0.110 0.890 31 H 0.102 0.898 32 H 0.109 0.891 33 H 0.249 0.751 34 H 0.158 0.842 35 H 0.188 0.812 36 H 0.187 0.813 37 H 0.179 0.821 38 H 0.142 0.858 39 H 0.225 0.775 40 H -0.175 1.175 41 H -0.180 1.180 42 H 0.171 0.829 43 H 0.114 0.886 44 H 0.104 0.896 45 H 0.111 0.889 46 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 15.125 29.925 20.485 39.293 hybrid contribution -0.259 0.650 2.378 2.479 sum 14.866 30.575 22.863 40.970 Atomic orbital electron populations 1.42643 1.21294 1.20713 1.18756 0.73331 0.73351 0.73761 1.23582 0.99461 0.97581 0.87401 0.83789 1.22058 1.02904 0.90787 1.02061 1.22076 0.95880 1.02897 0.96914 1.21055 0.92871 0.92607 0.89082 0.89101 1.44312 1.71232 1.02408 1.16594 1.18308 0.87330 0.85445 0.88955 1.22136 1.14135 0.96496 1.00132 1.22993 0.87713 0.91749 0.95089 1.68400 1.16939 1.40456 1.00506 1.20672 0.88658 0.84321 0.91235 1.19101 1.05806 0.93719 0.92652 1.23091 0.89841 1.00964 0.86400 1.67870 1.13248 1.11008 1.26709 1.22977 0.93236 0.89501 0.97436 1.21335 1.03431 0.98107 0.95408 1.24944 0.95721 0.91121 1.06109 1.86640 1.21437 1.71030 1.54097 0.95023 0.87081 0.81874 0.77636 1.21648 0.89994 0.93032 0.97554 1.67742 1.22305 1.10833 1.28242 1.21756 1.03470 0.93917 0.97402 1.22031 0.89542 1.04233 1.01776 0.88712 0.89031 0.89849 0.89075 0.75108 0.84216 0.81157 0.81305 0.82080 0.85848 0.77511 1.17457 1.17971 0.82903 0.88586 0.89614 0.88895 0.88482 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.75 4.15 -4.67 -0.02 24.73 16 2 H 0.44 -17.61 8.96 -39.29 -0.35 -17.97 16 3 H 0.44 -17.65 8.96 -39.29 -0.35 -18.00 16 4 H 0.43 -17.31 8.90 -39.29 -0.35 -17.66 16 5 C 0.02 -0.78 3.02 -67.71 -0.20 -0.99 16 6 H 0.14 -4.75 8.14 -51.93 -0.42 -5.17 16 7 C -0.14 4.07 5.43 -26.73 -0.15 3.93 16 8 C -0.14 3.23 5.45 -26.73 -0.15 3.09 16 9 C 0.15 -3.26 2.15 -67.93 -0.15 -3.40 16 10 H 0.09 -1.97 6.52 -51.93 -0.34 -2.31 16 11 N -0.71 11.72 5.23 -53.79 -0.28 11.44 16 12 C 0.44 -5.30 7.69 -154.86 -1.19 -6.49 16 13 C -0.30 3.96 8.91 -39.04 -0.35 3.61 16 14 C 0.19 -1.98 11.28 -17.32 -0.20 -2.17 16 15 N -0.55 3.80 9.52 -11.22 -0.11 3.70 16 16 C 0.42 -2.74 7.56 -156.97 -1.19 -3.93 16 17 C -0.11 0.64 5.89 -104.76 -0.62 0.03 16 18 C 0.16 -0.92 10.73 -17.19 -0.18 -1.10 16 19 N -0.48 2.26 10.35 -12.96 -0.13 2.13 16 20 C 0.13 -0.76 9.84 -17.49 -0.17 -0.93 16 21 C -0.18 1.18 5.35 -104.53 -0.56 0.62 16 22 C -0.07 0.48 2.82 36.00 0.10 0.58 16 23 O -0.53 2.81 12.84 -35.23 -0.45 2.36 16 24 Si 0.68 -4.98 29.91 -169.99 -5.08 -10.06 16 25 C 0.00 -0.03 9.35 -38.93 -0.36 -0.39 16 26 N -0.57 4.75 9.51 -10.38 -0.10 4.65 16 27 C -0.13 3.07 5.40 -26.71 -0.14 2.93 16 28 C -0.14 4.05 5.43 -26.71 -0.15 3.91 16 29 H 0.09 -2.79 8.14 -51.93 -0.42 -3.21 16 30 H 0.09 -2.71 8.14 -51.93 -0.42 -3.13 16 31 H 0.08 -1.87 8.14 -51.93 -0.42 -2.30 16 32 H 0.09 -1.86 7.71 -51.93 -0.40 -2.26 16 33 H 0.41 -6.70 8.73 -40.82 -0.36 -7.06 16 34 H 0.14 -2.40 6.26 -52.49 -0.33 -2.73 16 35 H 0.17 -2.27 8.06 -52.49 -0.42 -2.70 16 36 H 0.17 -1.24 7.52 -52.48 -0.39 -1.63 16 37 H 0.16 -1.26 4.85 -52.48 -0.25 -1.51 16 38 H 0.12 -0.97 7.96 -51.93 -0.41 -1.38 16 39 H 0.38 -3.04 8.70 45.56 0.40 -2.64 16 40 H -0.25 0.91 7.11 56.52 0.40 1.31 16 41 H -0.25 1.39 7.01 56.52 0.40 1.79 16 42 H 0.15 -0.92 7.60 -52.49 -0.40 -1.32 16 43 H 0.10 -2.09 8.14 -51.93 -0.42 -2.51 16 44 H 0.09 -2.05 8.14 -51.93 -0.42 -2.47 16 45 H 0.09 -2.76 8.14 -51.93 -0.42 -3.18 16 46 H 0.10 -2.91 8.14 -51.93 -0.42 -3.33 16 LS Contribution 367.81 15.07 5.54 5.54 Total: 1.00 -44.79 367.81 -12.83 -57.62 By element: Atomic # 1 Polarization: -94.83 SS G_CDS: -6.55 Total: -101.38 kcal Atomic # 6 Polarization: 4.92 SS G_CDS: -5.65 Total: -0.72 kcal Atomic # 7 Polarization: 47.29 SS G_CDS: -0.64 Total: 46.65 kcal Atomic # 8 Polarization: 2.81 SS G_CDS: -0.45 Total: 2.36 kcal Atomic # 14 Polarization: -4.98 SS G_CDS: -5.08 Total: -10.06 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -44.79 -12.83 -57.62 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081518_17085348.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 233.571 kcal (2) G-P(sol) polarization free energy of solvation -44.787 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 188.784 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.832 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -57.620 kcal (6) G-S(sol) free energy of system = (1) + (5) 175.951 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.06 seconds