Wall clock time and date at job start Mon Mar 8 2021 09:57:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00898 * 1 3 3 H 1.00908 * 109.47043 * 1 2 4 4 H 1.00896 * 109.47602 * 239.99988 * 1 2 3 5 5 C 1.46899 * 109.47477 * 119.99350 * 1 2 3 6 6 H 1.08997 * 109.47384 * 300.00968 * 5 1 2 7 7 C 1.53006 * 109.46854 * 60.00558 * 5 1 2 8 8 C 1.53000 * 109.47050 * 180.02562 * 7 5 1 9 9 C 1.52992 * 109.47195 * 299.99670 * 8 7 5 10 10 H 1.09002 * 109.47232 * 300.00198 * 9 8 7 11 11 N 1.46501 * 109.47304 * 180.02562 * 9 8 7 12 12 C 1.38996 * 120.00067 * 155.00138 * 11 9 8 13 13 C 1.39349 * 120.02760 * 0.02562 * 12 11 9 14 14 N 1.32015 * 120.11142 * 179.72107 * 13 12 11 15 15 C 1.32084 * 120.18815 * 0.51965 * 14 13 12 16 16 C 1.39323 * 120.05172 * 359.48433 * 15 14 13 17 17 C 1.48334 * 120.05854 * 180.23674 * 16 15 14 18 18 C 1.39328 * 120.54167 * 180.02562 * 17 16 15 19 19 N 1.31737 * 120.59431 * 180.02562 * 18 17 16 20 20 C 1.31890 * 121.85481 * 359.97438 * 19 18 17 21 21 C 1.38322 * 121.03776 * 359.97438 * 20 19 18 22 22 C 1.50696 * 120.36063 * 180.02562 * 21 20 19 23 23 O 1.42896 * 109.47662 * 119.99650 * 22 21 20 24 24 Si 1.86305 * 109.47200 * 359.97438 * 22 21 20 25 25 C 1.38408 * 119.28141 * 359.76129 * 21 20 19 26 26 N 1.32569 * 120.02425 * 180.02562 * 12 11 9 27 27 C 1.53005 * 109.47225 * 60.00200 * 9 8 7 28 28 C 1.53000 * 109.46870 * 299.99998 * 27 9 8 29 29 H 1.09002 * 109.47211 * 59.99905 * 7 5 1 30 30 H 1.09003 * 109.47036 * 299.99837 * 7 5 1 31 31 H 1.09001 * 109.46950 * 179.97438 * 8 7 5 32 32 H 1.08997 * 109.47288 * 60.00349 * 8 7 5 33 33 H 0.97000 * 119.99379 * 335.00020 * 11 9 8 34 34 H 1.07999 * 119.94734 * 359.97438 * 13 12 11 35 35 H 1.08002 * 119.97769 * 179.76682 * 15 14 13 36 36 H 1.07996 * 119.69963 * 359.97438 * 18 17 16 37 37 H 1.08000 * 119.48663 * 179.97438 * 20 19 18 38 38 H 1.09005 * 109.47355 * 239.99746 * 22 21 20 39 39 H 0.96697 * 114.00285 * 180.02562 * 23 22 21 40 40 H 1.48500 * 109.99832 * 60.00165 * 24 22 21 41 41 H 1.48500 * 110.00164 * 181.32166 * 24 22 21 42 42 H 1.08000 * 120.84601 * 180.26007 * 25 21 20 43 43 H 1.09002 * 109.47017 * 59.99866 * 27 9 8 44 44 H 1.08994 * 109.47630 * 180.02562 * 27 9 8 45 45 H 1.09002 * 109.47192 * 299.99761 * 28 27 9 46 46 H 1.09002 * 109.47203 * 179.97438 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3363 0.9514 0.0000 4 1 -0.3364 -0.4756 0.8238 5 6 -0.4898 -0.6923 -1.1995 6 1 -0.1263 -0.1786 -2.0894 7 6 0.0201 -2.1349 -1.1995 8 6 -0.4894 -2.8559 -2.4491 9 6 -2.0193 -2.8558 -2.4498 10 1 -2.3831 -3.3698 -1.5600 11 7 -2.5072 -3.5467 -3.6460 12 6 -3.7675 -4.1330 -3.6445 13 6 -4.5676 -4.0635 -2.5057 14 7 -5.7670 -4.6149 -2.5043 15 6 -6.2102 -5.2437 -3.5781 16 6 -5.4164 -5.3176 -4.7206 17 6 -5.9161 -6.0191 -5.9283 18 6 -5.1305 -6.0996 -7.0762 19 7 -5.5734 -6.7219 -8.1495 20 6 -6.7638 -7.2889 -8.1839 21 6 -7.6027 -7.2534 -7.0847 22 6 -8.9595 -7.9068 -7.1406 23 8 -9.0420 -8.9201 -6.1365 24 14 -9.2107 -8.6738 -8.8198 25 6 -7.1803 -6.6160 -5.9311 26 7 -4.2093 -4.7587 -4.7265 27 6 -2.5293 -1.4133 -2.4497 28 6 -2.0198 -0.6923 -1.2001 29 1 -0.3432 -2.6488 -0.3096 30 1 1.1102 -2.1350 -1.1996 31 1 -0.1258 -3.8835 -2.4494 32 1 -0.1256 -2.3420 -3.3389 33 1 -1.9507 -3.5949 -4.4390 34 1 -4.2075 -3.5541 -1.6241 35 1 -7.1905 -5.6969 -3.5719 36 1 -4.1500 -5.6470 -7.0864 37 1 -7.0886 -7.7888 -9.0844 38 1 -9.7312 -7.1574 -6.9648 39 1 -9.8901 -9.3841 -6.1146 40 1 -8.1648 -9.6974 -9.0722 41 1 -10.5577 -9.2940 -8.8986 42 1 -7.8130 -6.5767 -5.0567 43 1 -2.1656 -0.8993 -3.3395 44 1 -3.6192 -1.4131 -2.4497 45 1 -2.3835 -1.2063 -0.3104 46 1 -2.3827 0.3355 -1.2002 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081518_17085452.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:57:47 Heat of formation + Delta-G solvation = 176.591124 kcal Electronic energy + Delta-G solvation = -27300.767340 eV Core-core repulsion = 23503.801625 eV Total energy + Delta-G solvation = -3796.965715 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.172 amu Computer time = 2.11 seconds Orbital eigenvalues (eV) -43.66794 -43.03715 -41.87131 -40.16058 -38.59265 -37.15608 -36.31472 -34.64809 -34.12249 -33.93292 -31.71876 -30.44311 -27.95885 -27.14401 -26.41809 -25.91512 -25.47947 -24.11981 -23.65089 -22.84565 -21.48036 -21.27673 -20.12841 -19.90281 -19.61484 -19.21484 -18.98702 -18.49719 -18.28495 -17.70886 -17.55223 -17.36549 -17.05623 -16.84691 -16.28971 -16.11768 -16.00231 -15.79597 -15.51349 -15.37537 -15.34730 -14.85662 -14.70991 -14.54969 -14.40736 -14.31246 -14.19940 -13.91257 -13.46140 -13.40909 -13.26929 -13.10074 -12.72820 -12.55701 -11.51496 -11.46616 -11.12577 -10.84885 -10.70076 -9.87811 -5.55281 -1.55975 -1.28095 -0.66513 -0.55349 -0.18639 0.53023 0.59148 0.63061 0.65448 0.76979 1.02908 1.38887 1.39561 1.49560 1.57800 1.73650 1.84845 1.93868 2.04280 2.09147 2.16129 2.21371 2.27308 2.33321 2.44637 2.52912 2.55143 2.62556 2.68734 2.75871 2.77333 2.96916 3.04937 3.07845 3.11295 3.15322 3.22210 3.30296 3.37011 3.40119 3.49269 3.58780 3.78911 3.92637 4.18691 4.35097 4.39600 4.57291 4.85220 5.17835 5.53596 5.76873 5.96416 6.22303 Molecular weight = 329.17amu Principal moments of inertia in cm(-1) A = 0.033546 B = 0.002251 C = 0.002165 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 834.477450 B =12434.401531 C =12932.708096 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.438 0.562 3 H 0.438 0.562 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.138 4.138 8 C -0.126 4.126 9 C 0.150 3.850 10 H 0.090 0.910 11 N -0.715 5.715 12 C 0.364 3.636 13 C -0.016 4.016 14 N -0.393 5.393 15 C 0.002 3.998 16 C 0.189 3.811 17 C -0.113 4.113 18 C 0.150 3.850 19 N -0.477 5.477 20 C 0.126 3.874 21 C -0.126 4.126 22 C -0.071 4.071 23 O -0.537 6.537 24 Si 0.678 3.322 25 C -0.021 4.021 26 N -0.495 5.495 27 C -0.139 4.139 28 C -0.140 4.140 29 H 0.093 0.907 30 H 0.096 0.904 31 H 0.096 0.904 32 H 0.085 0.915 33 H 0.411 0.589 34 H 0.161 0.839 35 H 0.171 0.829 36 H 0.169 0.831 37 H 0.163 0.837 38 H 0.084 0.916 39 H 0.386 0.614 40 H -0.250 1.250 41 H -0.254 1.254 42 H 0.145 0.855 43 H 0.083 0.917 44 H 0.090 0.910 45 H 0.092 0.908 46 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 21.135 24.456 20.353 38.197 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.267 0.733 4 H 0.263 0.737 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.176 4.176 8 C -0.165 4.165 9 C 0.044 3.956 10 H 0.108 0.892 11 N -0.349 5.349 12 C 0.124 3.876 13 C -0.184 4.184 14 N -0.106 5.106 15 C -0.159 4.159 16 C 0.050 3.950 17 C -0.116 4.116 18 C -0.008 4.008 19 N -0.184 5.184 20 C -0.030 4.030 21 C -0.128 4.128 22 C -0.182 4.182 23 O -0.345 6.345 24 Si 0.578 3.422 25 C -0.047 4.047 26 N -0.217 5.217 27 C -0.179 4.179 28 C -0.179 4.179 29 H 0.111 0.889 30 H 0.115 0.885 31 H 0.114 0.886 32 H 0.104 0.896 33 H 0.248 0.752 34 H 0.178 0.822 35 H 0.188 0.812 36 H 0.186 0.814 37 H 0.180 0.820 38 H 0.102 0.898 39 H 0.234 0.766 40 H -0.174 1.174 41 H -0.178 1.178 42 H 0.163 0.837 43 H 0.102 0.898 44 H 0.109 0.891 45 H 0.110 0.890 46 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 22.054 23.824 19.222 37.728 hybrid contribution -0.745 -0.380 1.675 1.872 sum 21.309 23.443 20.897 37.952 Atomic orbital electron populations 1.42641 1.21243 1.20737 1.18779 0.73375 0.73343 0.73746 1.23582 0.99601 0.97469 0.87372 0.83806 1.22028 1.02940 0.90817 1.01829 1.21736 0.94118 1.03235 0.97382 1.21050 0.93605 0.91939 0.89025 0.89167 1.44285 1.14743 1.59306 1.16594 1.19170 0.87328 0.90517 0.90571 1.23074 0.92089 1.05182 0.98034 1.68240 1.12132 1.03465 1.26716 1.23436 1.02066 1.01217 0.89185 1.20168 0.88949 0.92514 0.93408 1.19355 0.95963 1.02303 0.94026 1.23081 0.99199 0.91983 0.86572 1.67839 1.14345 1.08550 1.27624 1.22844 0.88821 0.94072 0.97305 1.20234 0.96833 1.00406 0.95316 1.24654 0.96064 0.93978 1.03461 1.86551 1.41285 1.52158 1.54462 0.95108 0.81079 0.86592 0.79383 1.21506 0.93786 0.91576 0.97839 1.67765 1.14809 1.12319 1.26832 1.22093 1.03405 0.95421 0.96937 1.22066 0.89423 1.04263 1.02110 0.88865 0.88504 0.88569 0.89632 0.75213 0.82192 0.81187 0.81367 0.82036 0.89803 0.76557 1.17383 1.17814 0.83749 0.89792 0.89112 0.88963 0.88708 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.57 4.15 -4.66 -0.02 24.55 16 2 H 0.44 -17.53 8.96 -39.29 -0.35 -17.89 16 3 H 0.44 -17.49 8.96 -39.29 -0.35 -17.84 16 4 H 0.43 -17.18 8.90 -39.29 -0.35 -17.53 16 5 C 0.02 -0.77 3.02 -67.71 -0.20 -0.98 16 6 H 0.14 -4.72 8.14 -51.93 -0.42 -5.14 16 7 C -0.14 4.03 5.43 -26.73 -0.15 3.88 16 8 C -0.13 3.03 5.39 -26.73 -0.14 2.88 16 9 C 0.15 -3.21 2.14 -67.93 -0.15 -3.36 16 10 H 0.09 -1.93 6.47 -51.93 -0.34 -2.27 16 11 N -0.72 11.64 5.25 -53.83 -0.28 11.36 16 12 C 0.36 -4.23 7.64 -154.80 -1.18 -5.41 16 13 C -0.02 0.19 10.00 -17.06 -0.17 0.02 16 14 N -0.39 3.24 10.48 -12.61 -0.13 3.11 16 15 C 0.00 -0.01 10.61 -17.04 -0.18 -0.20 16 16 C 0.19 -1.44 6.73 -82.79 -0.56 -2.00 16 17 C -0.11 0.77 5.89 -104.75 -0.62 0.15 16 18 C 0.15 -0.90 10.75 -17.19 -0.18 -1.09 16 19 N -0.48 2.19 10.35 -12.97 -0.13 2.06 16 20 C 0.13 -0.74 9.84 -17.50 -0.17 -0.91 16 21 C -0.13 0.83 5.43 -104.53 -0.57 0.26 16 22 C -0.07 0.56 2.83 36.00 0.10 0.66 16 23 O -0.54 3.53 12.75 -35.23 -0.45 3.08 16 24 Si 0.68 -5.27 29.82 -169.99 -5.07 -10.34 16 25 C -0.02 0.15 9.13 -38.94 -0.36 -0.21 16 26 N -0.50 4.25 9.67 -8.78 -0.08 4.17 16 27 C -0.14 3.21 5.43 -26.73 -0.15 3.06 16 28 C -0.14 4.04 5.43 -26.73 -0.15 3.89 16 29 H 0.09 -2.74 8.14 -51.93 -0.42 -3.16 16 30 H 0.10 -2.88 8.14 -51.93 -0.42 -3.30 16 31 H 0.10 -2.07 8.14 -51.93 -0.42 -2.50 16 32 H 0.09 -2.03 8.14 -51.93 -0.42 -2.45 16 33 H 0.41 -6.64 8.73 -40.82 -0.36 -7.00 16 34 H 0.16 -2.49 6.08 -52.49 -0.32 -2.81 16 35 H 0.17 -1.63 6.26 -52.49 -0.33 -1.96 16 36 H 0.17 -1.24 7.56 -52.49 -0.40 -1.63 16 37 H 0.16 -1.25 4.88 -52.49 -0.26 -1.50 16 38 H 0.08 -0.83 7.96 -51.93 -0.41 -1.24 16 39 H 0.39 -3.91 8.74 45.56 0.40 -3.51 16 40 H -0.25 1.11 7.11 56.52 0.40 1.51 16 41 H -0.25 1.37 7.11 56.52 0.40 1.77 16 42 H 0.14 -1.31 6.32 -52.49 -0.33 -1.64 16 43 H 0.08 -1.87 8.14 -51.93 -0.42 -2.30 16 44 H 0.09 -1.81 7.68 -51.93 -0.40 -2.21 16 45 H 0.09 -2.69 8.14 -51.93 -0.42 -3.11 16 46 H 0.09 -2.76 8.14 -51.93 -0.42 -3.18 16 LS Contribution 365.02 15.07 5.50 5.50 Total: 1.00 -44.88 365.02 -11.86 -56.74 By element: Atomic # 1 Polarization: -94.52 SS G_CDS: -6.37 Total: -100.89 kcal Atomic # 6 Polarization: 5.48 SS G_CDS: -4.82 Total: 0.67 kcal Atomic # 7 Polarization: 45.90 SS G_CDS: -0.65 Total: 45.25 kcal Atomic # 8 Polarization: 3.53 SS G_CDS: -0.45 Total: 3.08 kcal Atomic # 14 Polarization: -5.27 SS G_CDS: -5.07 Total: -10.34 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -44.88 -11.86 -56.74 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081518_17085452.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 233.330 kcal (2) G-P(sol) polarization free energy of solvation -44.879 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 188.450 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.859 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -56.739 kcal (6) G-S(sol) free energy of system = (1) + (5) 176.591 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.12 seconds