Wall clock time and date at job start Mon Mar 8 2021 09:57:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00898 * 1 3 3 H 1.00908 * 109.47043 * 1 2 4 4 H 1.00896 * 109.47602 * 239.99988 * 1 2 3 5 5 C 1.46899 * 109.47477 * 119.99350 * 1 2 3 6 6 H 1.08997 * 109.47384 * 300.00968 * 5 1 2 7 7 C 1.53006 * 109.46854 * 60.00558 * 5 1 2 8 8 C 1.53000 * 109.47050 * 180.02562 * 7 5 1 9 9 C 1.52992 * 109.47195 * 299.99670 * 8 7 5 10 10 H 1.09002 * 109.47232 * 300.00198 * 9 8 7 11 11 N 1.46501 * 109.47304 * 180.02562 * 9 8 7 12 12 C 1.38996 * 120.00067 * 155.00138 * 11 9 8 13 13 C 1.39349 * 120.02760 * 0.02562 * 12 11 9 14 14 N 1.32015 * 120.11142 * 179.72107 * 13 12 11 15 15 C 1.32084 * 120.18815 * 0.51965 * 14 13 12 16 16 C 1.39323 * 120.05172 * 359.48433 * 15 14 13 17 17 C 1.48334 * 120.05854 * 180.23674 * 16 15 14 18 18 C 1.39328 * 120.54167 * 180.02562 * 17 16 15 19 19 N 1.31737 * 120.59431 * 180.02562 * 18 17 16 20 20 C 1.31890 * 121.85481 * 359.97438 * 19 18 17 21 21 C 1.38322 * 121.03776 * 359.97438 * 20 19 18 22 22 C 1.50696 * 120.36063 * 180.02562 * 21 20 19 23 23 O 1.42896 * 109.47662 * 119.99650 * 22 21 20 24 24 Si 1.86305 * 109.47200 * 359.97438 * 22 21 20 25 25 C 1.38408 * 119.28141 * 359.76129 * 21 20 19 26 26 N 1.32569 * 120.02425 * 180.02562 * 12 11 9 27 27 C 1.53005 * 109.47225 * 60.00200 * 9 8 7 28 28 C 1.53000 * 109.46870 * 299.99998 * 27 9 8 29 29 H 1.09002 * 109.47211 * 59.99905 * 7 5 1 30 30 H 1.09003 * 109.47036 * 299.99837 * 7 5 1 31 31 H 1.09001 * 109.46950 * 179.97438 * 8 7 5 32 32 H 1.08997 * 109.47288 * 60.00349 * 8 7 5 33 33 H 0.97000 * 119.99379 * 335.00020 * 11 9 8 34 34 H 1.07999 * 119.94734 * 359.97438 * 13 12 11 35 35 H 1.08002 * 119.97769 * 179.76682 * 15 14 13 36 36 H 1.07996 * 119.69963 * 359.97438 * 18 17 16 37 37 H 1.08000 * 119.48663 * 179.97438 * 20 19 18 38 38 H 1.09005 * 109.47355 * 239.99746 * 22 21 20 39 39 H 0.96697 * 114.00285 * 180.02562 * 23 22 21 40 40 H 1.48500 * 109.99832 * 60.00165 * 24 22 21 41 41 H 1.48500 * 110.00164 * 181.32166 * 24 22 21 42 42 H 1.08000 * 120.84601 * 180.26007 * 25 21 20 43 43 H 1.09002 * 109.47017 * 59.99866 * 27 9 8 44 44 H 1.08994 * 109.47630 * 180.02562 * 27 9 8 45 45 H 1.09002 * 109.47192 * 299.99761 * 28 27 9 46 46 H 1.09002 * 109.47203 * 179.97438 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3363 0.9514 0.0000 4 1 -0.3364 -0.4756 0.8238 5 6 -0.4898 -0.6923 -1.1995 6 1 -0.1263 -0.1786 -2.0894 7 6 0.0201 -2.1349 -1.1995 8 6 -0.4894 -2.8559 -2.4491 9 6 -2.0193 -2.8558 -2.4498 10 1 -2.3831 -3.3698 -1.5600 11 7 -2.5072 -3.5467 -3.6460 12 6 -3.7675 -4.1330 -3.6445 13 6 -4.5676 -4.0635 -2.5057 14 7 -5.7670 -4.6149 -2.5043 15 6 -6.2102 -5.2437 -3.5781 16 6 -5.4164 -5.3176 -4.7206 17 6 -5.9161 -6.0191 -5.9283 18 6 -5.1305 -6.0996 -7.0762 19 7 -5.5734 -6.7219 -8.1495 20 6 -6.7638 -7.2889 -8.1839 21 6 -7.6027 -7.2534 -7.0847 22 6 -8.9595 -7.9068 -7.1406 23 8 -9.0420 -8.9201 -6.1365 24 14 -9.2107 -8.6738 -8.8198 25 6 -7.1803 -6.6160 -5.9311 26 7 -4.2093 -4.7587 -4.7265 27 6 -2.5293 -1.4133 -2.4497 28 6 -2.0198 -0.6923 -1.2001 29 1 -0.3432 -2.6488 -0.3096 30 1 1.1102 -2.1350 -1.1996 31 1 -0.1258 -3.8835 -2.4494 32 1 -0.1256 -2.3420 -3.3389 33 1 -1.9507 -3.5949 -4.4390 34 1 -4.2075 -3.5541 -1.6241 35 1 -7.1905 -5.6969 -3.5719 36 1 -4.1500 -5.6470 -7.0864 37 1 -7.0886 -7.7888 -9.0844 38 1 -9.7312 -7.1574 -6.9648 39 1 -9.8901 -9.3841 -6.1146 40 1 -8.1648 -9.6974 -9.0722 41 1 -10.5577 -9.2940 -8.8986 42 1 -7.8130 -6.5767 -5.0567 43 1 -2.1656 -0.8993 -3.3395 44 1 -3.6192 -1.4131 -2.4497 45 1 -2.3835 -1.2063 -0.3104 46 1 -2.3827 0.3355 -1.2002 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_273584_18081518_17085452.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:57:46 Heat of formation + Delta-G solvation = 139.157820 kcal Electronic energy + Delta-G solvation = -27302.390570 eV Core-core repulsion = 23503.801625 eV Total energy + Delta-G solvation = -3798.588945 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.172 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -42.37685 -41.37531 -40.94773 -38.29444 -38.00705 -35.75051 -35.39638 -33.93298 -33.02767 -32.02686 -30.54801 -28.87390 -27.34880 -26.31403 -25.36264 -24.09475 -23.86749 -23.06739 -22.19551 -21.38460 -19.28172 -18.81826 -18.65424 -18.46734 -18.29619 -18.10170 -17.73849 -17.48740 -17.24242 -16.56132 -16.34921 -16.27906 -15.64653 -15.44565 -15.33341 -15.00605 -14.88699 -14.52889 -14.18009 -14.07726 -13.89188 -13.78923 -13.66279 -13.38575 -12.82850 -12.70934 -12.64354 -12.50532 -12.46300 -12.24012 -12.15791 -12.05585 -11.53461 -11.35400 -10.91812 -10.88759 -10.47145 -10.13998 -10.01183 -8.90722 -4.97868 -0.87712 -0.01434 0.16323 0.46659 1.21476 1.55239 1.56773 1.84877 1.91660 2.40848 2.81475 2.85619 3.12578 3.15924 3.26352 3.27196 3.34569 3.38413 3.59597 3.63522 3.67776 3.70840 3.78745 3.85692 3.92813 3.94672 4.07775 4.12822 4.13969 4.18896 4.30808 4.38257 4.44938 4.50494 4.53629 4.62210 4.63175 4.71047 4.84515 4.89629 4.93481 5.02254 5.06844 5.10427 5.11959 5.24731 5.30167 5.40470 5.71210 6.23508 6.44706 6.52193 6.72716 6.84776 Molecular weight = 329.17amu Principal moments of inertia in cm(-1) A = 0.033546 B = 0.002251 C = 0.002165 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 834.477450 B =12434.401531 C =12932.708096 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.618 5.618 2 H 0.450 0.550 3 H 0.450 0.550 4 H 0.444 0.556 5 C 0.050 3.950 6 H 0.150 0.850 7 C -0.136 4.136 8 C -0.126 4.126 9 C 0.139 3.861 10 H 0.093 0.907 11 N -0.705 5.705 12 C 0.363 3.637 13 C -0.006 4.006 14 N -0.419 5.419 15 C -0.020 4.020 16 C 0.171 3.829 17 C -0.109 4.109 18 C 0.137 3.863 19 N -0.502 5.502 20 C 0.109 3.891 21 C -0.131 4.131 22 C -0.071 4.071 23 O -0.556 6.556 24 Si 0.748 3.252 25 C -0.025 4.025 26 N -0.522 5.522 27 C -0.139 4.139 28 C -0.138 4.138 29 H 0.101 0.899 30 H 0.111 0.889 31 H 0.068 0.932 32 H 0.082 0.918 33 H 0.409 0.591 34 H 0.197 0.803 35 H 0.176 0.824 36 H 0.172 0.828 37 H 0.172 0.828 38 H 0.111 0.889 39 H 0.400 0.600 40 H -0.300 1.300 41 H -0.282 1.282 42 H 0.161 0.839 43 H 0.074 0.926 44 H 0.057 0.943 45 H 0.102 0.898 46 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 22.782 27.088 23.148 42.292 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.020 5.020 2 H 0.282 0.718 3 H 0.281 0.719 4 H 0.274 0.726 5 C -0.056 4.056 6 H 0.168 0.832 7 C -0.174 4.174 8 C -0.165 4.165 9 C 0.035 3.965 10 H 0.111 0.889 11 N -0.338 5.338 12 C 0.120 3.880 13 C -0.176 4.176 14 N -0.131 5.131 15 C -0.179 4.179 16 C 0.033 3.967 17 C -0.113 4.113 18 C -0.021 4.021 19 N -0.209 5.209 20 C -0.047 4.047 21 C -0.133 4.133 22 C -0.181 4.181 23 O -0.366 6.366 24 Si 0.654 3.346 25 C -0.051 4.051 26 N -0.246 5.246 27 C -0.178 4.178 28 C -0.176 4.176 29 H 0.119 0.881 30 H 0.129 0.871 31 H 0.087 0.913 32 H 0.101 0.899 33 H 0.246 0.754 34 H 0.214 0.786 35 H 0.193 0.807 36 H 0.189 0.811 37 H 0.188 0.812 38 H 0.129 0.871 39 H 0.251 0.749 40 H -0.227 1.227 41 H -0.208 1.208 42 H 0.179 0.821 43 H 0.093 0.907 44 H 0.075 0.925 45 H 0.120 0.880 46 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 23.709 26.494 22.039 41.830 hybrid contribution -1.095 -1.156 0.885 1.822 sum 22.613 25.338 22.924 40.974 Atomic orbital electron populations 1.42245 1.22108 1.20944 1.16746 0.71819 0.71875 0.72609 1.22866 0.96627 0.96018 0.90076 0.83240 1.21966 1.03740 0.92560 0.99100 1.21702 0.91834 1.02574 1.00386 1.21523 0.95561 0.92550 0.86823 0.88926 1.44753 1.12828 1.57945 1.18232 1.19527 0.88765 0.89773 0.89889 1.23668 0.91031 1.03769 0.99110 1.68246 1.13609 1.04379 1.26853 1.23477 1.02562 1.02446 0.89405 1.20093 0.89757 0.93602 0.93282 1.19477 0.95951 1.01749 0.94085 1.23164 0.99662 0.92463 0.86828 1.67789 1.15187 1.09446 1.28501 1.23032 0.88880 0.94633 0.98157 1.20399 0.97321 1.00358 0.95221 1.24717 0.96082 0.94396 1.02882 1.86514 1.42720 1.52672 1.54730 0.94305 0.76977 0.84658 0.78666 1.21735 0.93921 0.91227 0.98258 1.67768 1.14853 1.13611 1.28337 1.21988 1.01377 0.94601 0.99877 1.21981 0.92335 1.04046 0.99247 0.88057 0.87077 0.91340 0.89926 0.75432 0.78611 0.80685 0.81069 0.81191 0.87093 0.74895 1.22738 1.20829 0.82127 0.90700 0.92457 0.87955 0.87616 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.62 48.95 4.15 -168.67 -0.70 48.24 16 2 H 0.45 -37.09 8.96 -89.70 -0.80 -37.90 16 3 H 0.45 -36.92 8.96 -89.69 -0.80 -37.72 16 4 H 0.44 -36.08 8.90 -89.70 -0.80 -36.88 16 5 C 0.05 -3.35 3.02 44.92 0.14 -3.21 16 6 H 0.15 -10.02 8.14 -2.39 -0.02 -10.04 16 7 C -0.14 8.00 5.43 30.60 0.17 8.17 16 8 C -0.13 5.89 5.39 30.59 0.16 6.06 16 9 C 0.14 -5.75 2.14 44.99 0.10 -5.65 16 10 H 0.09 -3.87 6.47 -2.39 -0.02 -3.89 16 11 N -0.71 21.13 5.25 -324.23 -1.70 19.43 16 12 C 0.36 -7.44 7.64 133.07 1.02 -6.43 16 13 C -0.01 0.13 10.00 84.93 0.85 0.98 16 14 N -0.42 5.89 10.48 -193.80 -2.03 3.86 16 15 C -0.02 0.26 10.61 84.92 0.90 1.16 16 16 C 0.17 -2.01 6.73 41.91 0.28 -1.73 16 17 C -0.11 1.12 5.89 -19.95 -0.12 1.00 16 18 C 0.14 -1.13 10.75 84.97 0.91 -0.21 16 19 N -0.50 2.85 10.35 -194.93 -2.02 0.83 16 20 C 0.11 -0.95 9.84 84.70 0.83 -0.12 16 21 C -0.13 1.42 5.43 -19.81 -0.11 1.31 16 22 C -0.07 1.02 2.83 71.23 0.20 1.22 16 23 O -0.56 6.57 12.75 -148.98 -1.90 4.67 16 24 Si 0.75 -10.09 29.82 68.60 2.05 -8.04 16 25 C -0.03 0.29 9.13 22.69 0.21 0.50 16 26 N -0.52 7.15 9.67 -181.70 -1.76 5.39 16 27 C -0.14 6.22 5.43 30.60 0.17 6.39 16 28 C -0.14 8.01 5.43 30.59 0.17 8.18 16 29 H 0.10 -6.07 8.14 -2.39 -0.02 -6.09 16 30 H 0.11 -6.76 8.14 -2.39 -0.02 -6.78 16 31 H 0.07 -2.78 8.14 -2.39 -0.02 -2.80 16 32 H 0.08 -3.79 8.14 -2.39 -0.02 -3.81 16 33 H 0.41 -11.98 8.73 -92.71 -0.81 -12.79 16 34 H 0.20 -5.93 6.08 -2.91 -0.02 -5.94 16 35 H 0.18 -2.82 6.26 -2.91 -0.02 -2.84 16 36 H 0.17 -1.79 7.56 -2.91 -0.02 -1.81 16 37 H 0.17 -2.09 4.88 -2.91 -0.01 -2.11 16 38 H 0.11 -2.17 7.96 -2.38 -0.02 -2.19 16 39 H 0.40 -7.69 8.74 -74.06 -0.65 -8.33 16 40 H -0.30 1.58 7.11 99.48 0.71 2.28 16 41 H -0.28 2.52 7.11 99.48 0.71 3.22 16 42 H 0.16 -2.56 6.32 -2.91 -0.02 -2.58 16 43 H 0.07 -3.20 8.14 -2.39 -0.02 -3.22 16 44 H 0.06 -2.14 7.68 -2.39 -0.02 -2.16 16 45 H 0.10 -6.09 8.14 -2.39 -0.02 -6.10 16 46 H 0.11 -6.26 8.14 -2.39 -0.02 -6.28 16 Total: 1.00 -99.83 365.02 -4.93 -104.76 By element: Atomic # 1 Polarization: -194.02 SS G_CDS: -2.75 Total: -196.76 kcal Atomic # 6 Polarization: 11.74 SS G_CDS: 5.88 Total: 17.62 kcal Atomic # 7 Polarization: 85.97 SS G_CDS: -8.21 Total: 77.76 kcal Atomic # 8 Polarization: 6.57 SS G_CDS: -1.90 Total: 4.67 kcal Atomic # 14 Polarization: -10.09 SS G_CDS: 2.05 Total: -8.04 kcal Total: -99.83 -4.93 -104.76 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081518_17085452.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 243.918 kcal (2) G-P(sol) polarization free energy of solvation -99.829 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 144.089 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.931 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -104.760 kcal (6) G-S(sol) free energy of system = (1) + (5) 139.158 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds