Wall clock time and date at job start Mon Mar 8 2021 09:59:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00897 * 1 3 3 H 1.00902 * 109.46773 * 1 2 4 4 H 1.00900 * 109.47261 * 240.00883 * 1 2 3 5 5 C 1.46895 * 109.47360 * 120.00337 * 1 2 3 6 6 H 1.09001 * 109.47321 * 180.02562 * 5 1 2 7 7 C 1.53009 * 109.47186 * 299.99796 * 5 1 2 8 8 C 1.52995 * 109.46940 * 179.97438 * 7 5 1 9 9 C 1.52994 * 109.47570 * 299.99944 * 8 7 5 10 10 H 1.09001 * 109.47216 * 300.00603 * 9 8 7 11 11 N 1.46495 * 109.47443 * 180.02562 * 9 8 7 12 12 C 1.38411 * 119.99888 * 85.00076 * 11 9 8 13 13 N 1.32350 * 119.15351 * 180.02562 * 12 11 9 14 14 C 1.33123 * 120.61053 * 179.97438 * 13 12 11 15 15 C 1.48309 * 120.50560 * 179.97438 * 14 13 12 16 16 C 1.39336 * 120.53864 * 185.02295 * 15 14 13 17 17 N 1.31743 * 120.59450 * 179.97438 * 16 15 14 18 18 C 1.31898 * 121.85102 * 0.02967 * 17 16 15 19 19 C 1.38324 * 121.04181 * 359.97438 * 18 17 16 20 20 C 1.50693 * 120.35598 * 180.02562 * 19 18 17 21 21 O 1.42904 * 109.46882 * 120.00333 * 20 19 18 22 22 Si 1.86301 * 109.47632 * 0.02562 * 20 19 18 23 23 C 1.38401 * 119.28056 * 359.72404 * 19 18 17 24 24 C 1.39711 * 118.98577 * 0.02562 * 14 13 12 25 25 C 1.38375 * 118.44758 * 359.97438 * 24 14 13 26 26 N 1.32343 * 119.28750 * 0.02562 * 25 24 14 27 27 C 1.53009 * 109.46943 * 60.00059 * 9 8 7 28 28 C 1.52994 * 109.47347 * 59.99754 * 5 1 2 29 29 H 1.08995 * 109.46962 * 300.00287 * 7 5 1 30 30 H 1.09001 * 109.46720 * 59.99964 * 7 5 1 31 31 H 1.09006 * 109.46547 * 179.97438 * 8 7 5 32 32 H 1.09001 * 109.47344 * 60.00468 * 8 7 5 33 33 H 0.97002 * 120.00235 * 265.00509 * 11 9 8 34 34 H 1.07997 * 119.70928 * 359.97438 * 16 15 14 35 35 H 1.08007 * 119.47762 * 180.02562 * 18 17 16 36 36 H 1.08998 * 109.47200 * 239.99806 * 20 19 18 37 37 H 0.96705 * 113.99822 * 299.99537 * 21 20 19 38 38 H 1.48497 * 109.99976 * 58.67389 * 22 20 19 39 39 H 1.48496 * 110.00320 * 180.02562 * 22 20 19 40 40 H 1.08005 * 120.84083 * 180.27071 * 23 19 18 41 41 H 1.08002 * 120.77198 * 180.27015 * 24 14 13 42 42 H 1.07998 * 120.35318 * 179.97438 * 25 24 14 43 43 H 1.09001 * 109.46720 * 60.00241 * 27 9 8 44 44 H 1.08995 * 109.46962 * 179.97438 * 27 9 8 45 45 H 1.09002 * 109.46750 * 60.00402 * 28 5 1 46 46 H 1.09001 * 109.47216 * 300.00439 * 28 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3363 0.9513 0.0000 4 1 -0.3364 -0.4755 0.8239 5 6 -0.4897 -0.6925 -1.1993 6 1 -1.5797 -0.6921 -1.1996 7 6 0.0202 0.0287 -2.4487 8 6 -0.4893 -0.6930 -3.6978 9 6 0.0212 -2.1353 -3.6975 10 1 1.1112 -2.1349 -3.6973 11 7 -0.4662 -2.8261 -4.8939 12 6 0.2295 -2.7204 -6.0858 13 7 -0.2262 -3.3511 -7.1564 14 6 0.4196 -3.2689 -8.3176 15 6 -0.0928 -3.9771 -9.5157 16 6 0.6359 -3.9778 -10.7034 17 7 0.1820 -4.6069 -11.7682 18 6 -0.9670 -5.2545 -11.7570 19 6 -1.7488 -5.3004 -10.6168 20 6 -3.0587 -6.0454 -10.6211 21 8 -3.0199 -7.0827 -9.6389 22 14 -3.3420 -6.7941 -12.3033 23 6 -1.3119 -4.6600 -9.4702 24 6 1.5879 -2.5063 -8.3900 25 6 2.0278 -1.8640 -7.2461 26 7 1.3348 -1.9902 -6.1256 27 6 -0.4888 -2.8565 -2.4481 28 6 0.0203 -2.1350 -1.1993 29 1 -0.3431 1.0563 -2.4487 30 1 1.1103 0.0287 -2.4487 31 1 -0.1263 -0.1789 -4.5879 32 1 -1.5793 -0.6934 -3.6980 33 1 -1.2766 -3.3576 -4.8508 34 1 1.5813 -3.4579 -10.7515 35 1 -1.3022 -5.7576 -12.6520 36 1 -3.8699 -5.3553 -10.3888 37 1 -2.3204 -7.7347 -9.7829 38 1 -2.2263 -7.7127 -12.6448 39 1 -4.6310 -7.5311 -12.3208 40 1 -1.9001 -4.6834 -8.5647 41 1 2.1324 -2.4163 -9.3184 42 1 2.9274 -1.2668 -7.2672 43 1 -1.5788 -2.8569 -2.4484 44 1 -0.1255 -3.8841 -2.4482 45 1 -0.3431 -2.6488 -0.3093 46 1 1.1103 -2.1350 -1.1993 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081518_17085550.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:59:15 Heat of formation + Delta-G solvation = 176.776360 kcal Electronic energy + Delta-G solvation = -27450.682444 eV Core-core repulsion = 23653.724761 eV Total energy + Delta-G solvation = -3796.957683 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.172 amu Computer time = 1.92 seconds Orbital eigenvalues (eV) -43.53040 -42.95745 -41.95073 -39.95526 -38.69908 -36.92797 -36.09830 -34.28136 -34.01399 -33.96750 -32.15956 -30.59078 -27.97891 -27.17683 -26.19702 -25.88185 -24.90802 -24.65143 -23.49129 -22.92293 -21.40800 -21.20923 -20.19916 -19.89422 -19.57875 -19.11605 -18.76883 -18.21796 -17.76718 -17.49199 -17.35656 -17.11122 -17.10233 -16.87880 -16.73518 -16.10865 -15.99450 -15.67452 -15.47984 -15.43580 -15.27407 -14.87922 -14.79446 -14.72348 -14.51320 -14.18387 -13.93017 -13.69978 -13.31141 -13.21962 -13.01965 -12.87956 -12.57528 -12.57336 -11.58127 -11.28182 -11.19915 -11.07852 -10.78882 -10.12088 -5.57380 -1.51258 -1.21181 -0.70403 -0.61915 -0.12312 0.57358 0.60607 0.67631 0.73193 0.83131 0.98830 1.37626 1.47734 1.57772 1.66309 1.78586 1.96499 2.04364 2.05796 2.16060 2.25266 2.29881 2.40681 2.44894 2.50066 2.65358 2.66341 2.70561 2.81690 2.86443 2.93923 2.97171 3.07516 3.17861 3.19306 3.25633 3.32208 3.37184 3.52231 3.55399 3.67660 3.73497 3.86993 3.91964 4.20028 4.28781 4.37455 4.76477 4.80086 5.03853 5.37581 5.68480 6.11143 6.33222 Molecular weight = 329.17amu Principal moments of inertia in cm(-1) A = 0.019446 B = 0.002587 C = 0.002347 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1439.561718 B =10822.007715 C =11926.788851 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.434 0.566 3 H 0.437 0.563 4 H 0.437 0.563 5 C 0.024 3.976 6 H 0.143 0.857 7 C -0.138 4.138 8 C -0.131 4.131 9 C 0.160 3.840 10 H 0.098 0.902 11 N -0.700 5.700 12 C 0.569 3.431 13 N -0.564 5.564 14 C 0.272 3.728 15 C -0.121 4.121 16 C 0.140 3.860 17 N -0.474 5.474 18 C 0.125 3.875 19 C -0.178 4.178 20 C -0.069 4.069 21 O -0.527 6.527 22 Si 0.682 3.318 23 C 0.000 4.000 24 C -0.272 4.272 25 C 0.198 3.802 26 N -0.574 5.574 27 C -0.129 4.129 28 C -0.136 4.136 29 H 0.091 0.909 30 H 0.092 0.908 31 H 0.090 0.910 32 H 0.075 0.925 33 H 0.416 0.584 34 H 0.166 0.834 35 H 0.163 0.837 36 H 0.123 0.877 37 H 0.378 0.622 38 H -0.254 1.254 39 H -0.250 1.250 40 H 0.149 0.851 41 H 0.152 0.848 42 H 0.174 0.826 43 H 0.082 0.918 44 H 0.093 0.907 45 H 0.095 0.905 46 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.092 16.990 31.323 35.768 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.262 0.738 3 H 0.266 0.734 4 H 0.265 0.735 5 C -0.080 4.080 6 H 0.161 0.839 7 C -0.176 4.176 8 C -0.170 4.170 9 C 0.054 3.946 10 H 0.116 0.884 11 N -0.338 5.338 12 C 0.212 3.788 13 N -0.285 5.285 14 C 0.125 3.875 15 C -0.124 4.124 16 C -0.019 4.019 17 N -0.181 5.181 18 C -0.031 4.031 19 C -0.180 4.180 20 C -0.179 4.179 21 O -0.334 6.334 22 Si 0.582 3.418 23 C -0.026 4.026 24 C -0.297 4.297 25 C 0.032 3.968 26 N -0.297 5.297 27 C -0.168 4.168 28 C -0.174 4.174 29 H 0.110 0.890 30 H 0.110 0.890 31 H 0.109 0.891 32 H 0.094 0.906 33 H 0.254 0.746 34 H 0.183 0.817 35 H 0.180 0.820 36 H 0.141 0.859 37 H 0.226 0.774 38 H -0.179 1.179 39 H -0.174 1.174 40 H 0.167 0.833 41 H 0.169 0.831 42 H 0.191 0.809 43 H 0.101 0.899 44 H 0.112 0.888 45 H 0.113 0.887 46 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 2.442 16.474 31.123 35.299 hybrid contribution 0.330 -0.624 1.084 1.294 sum 2.772 15.849 32.207 36.002 Atomic orbital electron populations 1.42648 1.21320 1.20728 1.18658 0.73760 0.73413 0.73470 1.23597 1.04464 0.95772 0.84191 0.83913 1.22043 1.03258 1.00117 0.92184 1.21968 1.01901 0.95996 0.97151 1.20907 1.00540 0.90144 0.82971 0.88394 1.43918 1.29205 1.55322 1.05329 1.19070 0.86451 0.87109 0.86197 1.67736 1.35449 1.26310 0.99050 1.19536 0.89045 0.89315 0.89566 1.19482 0.97321 1.02295 0.93283 1.23064 0.98646 0.93511 0.86722 1.67828 1.13635 1.07862 1.28783 1.22913 0.89386 0.93835 0.96995 1.21385 0.99369 1.02056 0.95222 1.24941 0.96121 0.92386 1.04445 1.86619 1.57949 1.39010 1.49791 0.95003 0.81345 0.86848 0.78598 1.21614 0.93370 0.89495 0.98144 1.22597 1.00248 1.04516 1.02371 1.22915 0.96106 0.91574 0.86206 1.67835 1.08642 1.22956 1.30228 1.21770 1.02505 1.00869 0.91625 1.21988 1.03293 0.90749 1.01391 0.89015 0.88964 0.89094 0.90604 0.74645 0.81678 0.82008 0.85880 0.77447 1.17859 1.17428 0.83283 0.83076 0.80888 0.89928 0.88832 0.88684 0.88916 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 27. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 23.94 4.15 -4.67 -0.02 23.92 16 2 H 0.43 -16.75 8.90 -39.29 -0.35 -17.10 16 3 H 0.44 -17.08 8.96 -39.29 -0.35 -17.44 16 4 H 0.44 -17.14 8.96 -39.29 -0.35 -17.49 16 5 C 0.02 -0.74 3.03 -67.71 -0.20 -0.95 16 6 H 0.14 -4.51 8.14 -51.93 -0.42 -4.93 16 7 C -0.14 3.73 5.43 -26.73 -0.15 3.58 16 8 C -0.13 2.74 5.51 -26.74 -0.15 2.59 16 9 C 0.16 -3.08 2.45 -67.93 -0.17 -3.25 16 10 H 0.10 -1.75 7.50 -51.93 -0.39 -2.14 16 11 N -0.70 10.13 5.22 -55.82 -0.29 9.84 16 12 C 0.57 -5.93 8.40 -322.92 -2.71 -8.64 16 13 N -0.56 4.66 9.70 -10.47 -0.10 4.56 16 14 C 0.27 -2.26 6.76 -82.61 -0.56 -2.81 16 15 C -0.12 0.93 5.89 -104.76 -0.62 0.31 16 16 C 0.14 -1.08 10.61 -17.18 -0.18 -1.26 16 17 N -0.47 2.79 10.35 -12.96 -0.13 2.66 16 18 C 0.13 -0.89 9.84 -17.49 -0.17 -1.06 16 19 C -0.18 1.37 5.39 -104.53 -0.56 0.80 16 20 C -0.07 0.56 2.84 36.00 0.10 0.66 16 21 O -0.53 3.50 12.77 -35.23 -0.45 3.05 16 22 Si 0.68 -5.52 29.82 -169.99 -5.07 -10.58 16 23 C 0.00 0.00 9.30 -38.93 -0.36 -0.36 16 24 C -0.27 2.82 9.53 -38.98 -0.37 2.45 16 25 C 0.20 -2.24 11.29 -17.28 -0.20 -2.44 16 26 N -0.57 6.30 9.19 -13.99 -0.13 6.17 16 27 C -0.13 2.89 5.39 -26.75 -0.14 2.75 16 28 C -0.14 3.78 5.43 -26.76 -0.15 3.64 16 29 H 0.09 -2.53 8.14 -51.93 -0.42 -2.95 16 30 H 0.09 -2.50 8.14 -51.93 -0.42 -2.92 16 31 H 0.09 -1.56 8.14 -51.93 -0.42 -1.98 16 32 H 0.08 -1.55 8.14 -51.93 -0.42 -1.98 16 33 H 0.42 -6.14 8.72 -40.82 -0.36 -6.50 16 34 H 0.17 -1.74 6.32 -52.49 -0.33 -2.07 16 35 H 0.16 -1.43 4.88 -52.48 -0.26 -1.68 16 36 H 0.12 -1.11 7.96 -51.93 -0.41 -1.52 16 37 H 0.38 -3.46 8.70 45.56 0.40 -3.07 16 38 H -0.25 1.53 7.11 56.52 0.40 1.93 16 39 H -0.25 1.11 7.11 56.52 0.40 1.51 16 40 H 0.15 -1.11 7.68 -52.48 -0.40 -1.51 16 41 H 0.15 -1.89 6.38 -52.49 -0.33 -2.22 16 42 H 0.17 -2.49 8.06 -52.49 -0.42 -2.91 16 43 H 0.08 -1.85 8.14 -51.93 -0.42 -2.27 16 44 H 0.09 -1.88 8.14 -51.93 -0.42 -2.30 16 45 H 0.09 -2.72 8.14 -51.93 -0.42 -3.14 16 46 H 0.09 -2.58 8.14 -51.93 -0.42 -3.01 16 LS Contribution 368.79 15.07 5.56 5.56 Total: 1.00 -42.71 368.79 -13.79 -56.50 By element: Atomic # 1 Polarization: -91.12 SS G_CDS: -6.57 Total: -97.68 kcal Atomic # 6 Polarization: 2.59 SS G_CDS: -6.59 Total: -3.99 kcal Atomic # 7 Polarization: 47.83 SS G_CDS: -0.68 Total: 47.15 kcal Atomic # 8 Polarization: 3.50 SS G_CDS: -0.45 Total: 3.05 kcal Atomic # 14 Polarization: -5.52 SS G_CDS: -5.07 Total: -10.58 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -42.71 -13.79 -56.50 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081518_17085550.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 233.277 kcal (2) G-P(sol) polarization free energy of solvation -42.711 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 190.566 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.790 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -56.501 kcal (6) G-S(sol) free energy of system = (1) + (5) 176.776 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.92 seconds