Wall clock time and date at job start Mon Mar 8 2021 10:00:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00896 * 1 3 3 H 1.00902 * 109.47382 * 1 2 4 4 H 1.00898 * 109.47734 * 239.99732 * 1 2 3 5 5 C 1.46907 * 109.47323 * 119.99765 * 1 2 3 6 6 H 1.08999 * 109.47441 * 180.02562 * 5 1 2 7 7 C 1.53003 * 109.47053 * 300.00832 * 5 1 2 8 8 C 1.52997 * 109.46860 * 179.97438 * 7 5 1 9 9 C 1.52999 * 109.47188 * 299.99296 * 8 7 5 10 10 H 1.08999 * 109.47091 * 300.00470 * 9 8 7 11 11 N 1.46499 * 109.47341 * 180.02562 * 9 8 7 12 12 C 1.38005 * 119.99940 * 85.27962 * 11 9 8 13 13 N 1.33070 * 120.03701 * 359.44327 * 12 11 9 14 14 C 1.32154 * 120.10255 * 179.77364 * 13 12 11 15 15 N 1.32137 * 120.18377 * 0.50576 * 14 13 12 16 16 C 1.33166 * 120.07943 * 359.75225 * 15 14 13 17 17 C 1.48266 * 120.05114 * 179.97438 * 16 15 14 18 18 C 1.39352 * 120.54393 * 180.02562 * 17 16 15 19 19 N 1.31728 * 120.59593 * 179.97438 * 18 17 16 20 20 C 1.31903 * 121.85717 * 0.02562 * 19 18 17 21 21 C 1.38333 * 121.04030 * 359.97427 * 20 19 18 22 22 C 1.50695 * 120.35466 * 180.02562 * 21 20 19 23 23 O 1.42902 * 109.47320 * 245.00469 * 22 21 20 24 24 Si 1.86298 * 109.47385 * 5.00447 * 22 21 20 25 25 C 1.38401 * 119.28687 * 359.74764 * 21 20 19 26 26 N 1.32875 * 120.04268 * 179.72798 * 12 11 9 27 27 C 1.53001 * 109.46944 * 60.00112 * 9 8 7 28 28 C 1.53003 * 109.46437 * 59.99989 * 5 1 2 29 29 H 1.09002 * 109.46570 * 299.98916 * 7 5 1 30 30 H 1.08993 * 109.47787 * 59.99126 * 7 5 1 31 31 H 1.09001 * 109.47132 * 179.97438 * 8 7 5 32 32 H 1.08999 * 109.47488 * 59.99523 * 8 7 5 33 33 H 0.97001 * 119.99790 * 264.99588 * 11 9 8 34 34 H 1.07998 * 119.90960 * 180.25559 * 14 13 12 35 35 H 1.08006 * 119.70419 * 0.02562 * 18 17 16 36 36 H 1.08001 * 119.47975 * 179.97438 * 20 19 18 37 37 H 1.09006 * 109.47153 * 125.00150 * 22 21 20 38 38 H 0.96703 * 113.99817 * 180.02562 * 23 22 21 39 39 H 1.48496 * 110.00230 * 178.68149 * 24 22 21 40 40 H 1.48504 * 109.99831 * 299.99823 * 24 22 21 41 41 H 1.07994 * 120.84543 * 180.27605 * 25 21 20 42 42 H 1.08999 * 109.46935 * 60.00262 * 27 9 8 43 43 H 1.09004 * 109.47138 * 180.02562 * 27 9 8 44 44 H 1.09000 * 109.47291 * 60.00969 * 28 5 1 45 45 H 1.08999 * 109.47531 * 300.00222 * 28 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9513 0.0000 4 1 -0.3364 -0.4757 0.8238 5 6 -0.4897 -0.6925 -1.1995 6 1 -1.5797 -0.6921 -1.1998 7 6 0.0204 0.0287 -2.4487 8 6 -0.4891 -0.6929 -3.6979 9 6 0.0214 -2.1352 -3.6977 10 1 1.1113 -2.1348 -3.6974 11 7 -0.4660 -2.8260 -4.8941 12 6 0.2308 -2.7252 -6.0810 13 7 1.3395 -1.9918 -6.1424 14 6 2.0103 -1.8980 -7.2771 15 7 1.5781 -2.5235 -8.3579 16 6 0.4668 -3.2553 -8.3061 17 6 -0.0178 -3.9563 -9.5193 18 6 -1.1798 -4.7244 -9.4768 19 7 -1.6116 -5.3473 -10.5543 20 6 -0.9713 -5.2728 -11.7051 21 6 0.1895 -4.5306 -11.8288 22 6 0.9082 -4.4558 -13.1512 23 8 2.1900 -5.0764 -13.0326 24 14 -0.0912 -5.3387 -14.4521 25 6 0.6805 -3.8530 -10.7265 26 7 -0.2075 -3.3558 -7.1654 27 6 -0.4887 -2.8564 -2.4484 28 6 0.0203 -2.1350 -1.1994 29 1 -0.3430 1.0564 -2.4488 30 1 1.1104 0.0288 -2.4487 31 1 -0.1261 -0.1788 -4.5879 32 1 -1.5791 -0.6932 -3.6982 33 1 -1.2763 -3.3575 -4.8510 34 1 2.9119 -1.3053 -7.3223 35 1 -1.7319 -4.8090 -8.5524 36 1 -1.3595 -5.7995 -12.5643 37 1 1.0352 -3.4116 -13.4371 38 1 2.7096 -5.0647 -13.8480 39 1 0.5913 -5.2447 -15.7676 40 1 -0.2714 -6.7634 -14.0740 41 1 1.5821 -3.2626 -10.7958 42 1 -1.5787 -2.8568 -2.4487 43 1 -0.1246 -3.8839 -2.4479 44 1 -0.3431 -2.6488 -0.3095 45 1 1.1103 -2.1350 -1.1994 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_273584_18081518_17087578.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:00:46 Heat of formation + Delta-G solvation = 162.812157 kcal Electronic energy + Delta-G solvation = -27412.090232 eV Core-core repulsion = 23549.101105 eV Total energy + Delta-G solvation = -3862.989127 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.167 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -42.81707 -41.44866 -41.07005 -38.44092 -38.02153 -35.95626 -35.53943 -33.96844 -33.18863 -32.48857 -32.00822 -29.23335 -27.41404 -26.69563 -25.76163 -24.25281 -23.99297 -23.33096 -22.36815 -21.51304 -19.93126 -19.30736 -18.65868 -18.56723 -18.33806 -18.25647 -17.61086 -17.43472 -16.95626 -16.92102 -16.53864 -15.89656 -15.58006 -15.42731 -15.29863 -15.21934 -14.99613 -14.95049 -14.29426 -14.21426 -14.04857 -13.95057 -13.80847 -13.42970 -13.00430 -12.78611 -12.59302 -12.46026 -12.39820 -12.25247 -12.12955 -11.60316 -11.41574 -11.00077 -10.95816 -10.82738 -10.67663 -10.48115 -10.17269 -9.73547 -4.97030 -0.98907 -0.04628 -0.01138 0.40376 1.21042 1.43279 1.56265 1.66089 1.91559 2.33031 2.37850 2.76359 2.84011 3.10328 3.10879 3.22555 3.26718 3.37379 3.58916 3.61679 3.70283 3.74663 3.81967 3.86237 3.91792 3.97910 4.10928 4.15651 4.21441 4.30481 4.35656 4.48889 4.50765 4.55325 4.62980 4.70346 4.76996 4.87485 4.91930 4.97085 4.98467 5.05979 5.08078 5.20163 5.26055 5.29727 5.36520 5.44899 5.90279 6.28862 6.52358 6.66343 7.17873 Molecular weight = 330.17amu Principal moments of inertia in cm(-1) A = 0.034039 B = 0.002251 C = 0.002169 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 822.389468 B =12437.398014 C =12908.553136 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.617 5.617 2 H 0.443 0.557 3 H 0.450 0.550 4 H 0.451 0.549 5 C 0.052 3.948 6 H 0.154 0.846 7 C -0.135 4.135 8 C -0.129 4.129 9 C 0.148 3.852 10 H 0.086 0.914 11 N -0.673 5.673 12 C 0.588 3.412 13 N -0.603 5.603 14 C 0.381 3.619 15 N -0.609 5.609 16 C 0.444 3.556 17 C -0.122 4.122 18 C 0.159 3.841 19 N -0.501 5.501 20 C 0.124 3.876 21 C -0.140 4.140 22 C -0.074 4.074 23 O -0.557 6.557 24 Si 0.756 3.244 25 C 0.007 3.993 26 N -0.614 5.614 27 C -0.128 4.128 28 C -0.134 4.134 29 H 0.106 0.894 30 H 0.095 0.905 31 H 0.048 0.952 32 H 0.074 0.926 33 H 0.421 0.579 34 H 0.241 0.759 35 H 0.181 0.819 36 H 0.175 0.825 37 H 0.107 0.893 38 H 0.399 0.601 39 H -0.282 1.282 40 H -0.294 1.294 41 H 0.156 0.844 42 H 0.087 0.913 43 H 0.068 0.932 44 H 0.115 0.885 45 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.591 18.353 37.380 41.673 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.020 5.020 2 H 0.273 0.727 3 H 0.282 0.718 4 H 0.283 0.717 5 C -0.054 4.054 6 H 0.171 0.829 7 C -0.173 4.173 8 C -0.169 4.169 9 C 0.044 3.956 10 H 0.104 0.896 11 N -0.310 5.310 12 C 0.223 3.777 13 N -0.333 5.333 14 C 0.084 3.916 15 N -0.334 5.334 16 C 0.169 3.831 17 C -0.127 4.127 18 C -0.001 4.001 19 N -0.208 5.208 20 C -0.032 4.032 21 C -0.142 4.142 22 C -0.184 4.184 23 O -0.368 6.368 24 Si 0.661 3.339 25 C -0.021 4.021 26 N -0.343 5.343 27 C -0.166 4.166 28 C -0.173 4.173 29 H 0.124 0.876 30 H 0.114 0.886 31 H 0.066 0.934 32 H 0.093 0.907 33 H 0.260 0.740 34 H 0.257 0.743 35 H 0.198 0.802 36 H 0.192 0.808 37 H 0.125 0.875 38 H 0.251 0.749 39 H -0.209 1.209 40 H -0.222 1.222 41 H 0.173 0.827 42 H 0.106 0.894 43 H 0.086 0.914 44 H 0.133 0.867 45 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -2.619 17.134 37.516 41.326 hybrid contribution 1.910 -0.087 -0.751 2.054 sum -0.710 17.047 36.764 40.531 Atomic orbital electron populations 1.42233 1.22014 1.21082 1.16635 0.72666 0.71843 0.71732 1.22859 1.04736 0.93241 0.84596 0.82861 1.21928 1.03535 1.00481 0.91351 1.21838 1.01753 0.94315 0.98985 1.21427 1.00122 0.91794 0.82257 0.89557 1.44482 1.27941 1.53415 1.05150 1.19681 0.86164 0.84761 0.87060 1.68672 1.09783 1.24605 1.30244 1.25892 0.96313 0.88278 0.81097 1.69041 1.15999 1.14636 1.33744 1.20995 0.85489 0.86773 0.89880 1.19159 0.98985 1.02955 0.91555 1.23250 0.91305 0.88348 0.97193 1.67894 1.32718 1.20683 0.99530 1.23183 0.91025 0.93050 0.95934 1.20441 0.97298 0.99993 0.96465 1.24799 0.89361 1.04091 1.00125 1.86532 1.28209 1.81388 1.40634 0.94253 0.86500 0.79131 0.74061 1.21721 0.97421 0.93269 0.89677 1.68440 1.36712 1.29056 1.00131 1.21745 1.02809 0.99835 0.92249 1.21943 1.03638 0.92728 0.98950 0.87608 0.88602 0.93358 0.90733 0.73990 0.74271 0.80206 0.80837 0.87521 0.74950 1.20853 1.22162 0.82671 0.89397 0.91354 0.86654 0.88527 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.62 48.16 4.15 -168.66 -0.70 47.46 16 2 H 0.44 -35.38 8.90 -89.70 -0.80 -36.18 16 3 H 0.45 -36.50 8.96 -89.69 -0.80 -37.30 16 4 H 0.45 -36.82 8.96 -89.70 -0.80 -37.62 16 5 C 0.05 -3.37 3.03 44.92 0.14 -3.23 16 6 H 0.15 -10.15 8.14 -2.39 -0.02 -10.17 16 7 C -0.13 7.44 5.43 30.59 0.17 7.61 16 8 C -0.13 5.34 5.51 30.59 0.17 5.51 16 9 C 0.15 -5.55 2.46 44.99 0.11 -5.43 16 10 H 0.09 -2.98 7.53 -2.39 -0.02 -3.00 16 11 N -0.67 18.53 5.21 -330.05 -1.72 16.82 16 12 C 0.59 -10.67 8.45 261.26 2.21 -8.46 16 13 N -0.60 11.52 9.34 -202.57 -1.89 9.63 16 14 C 0.38 -6.69 12.40 180.67 2.24 -4.45 16 15 N -0.61 7.00 9.68 -193.54 -1.87 5.12 16 16 C 0.44 -4.39 7.60 137.26 1.04 -3.34 16 17 C -0.12 1.08 5.89 -19.95 -0.12 0.97 16 18 C 0.16 -1.41 10.75 84.98 0.91 -0.49 16 19 N -0.50 3.29 10.35 -194.89 -2.02 1.27 16 20 C 0.12 -1.12 9.84 84.70 0.83 -0.28 16 21 C -0.14 1.40 5.38 -19.80 -0.11 1.29 16 22 C -0.07 1.00 2.81 71.23 0.20 1.20 16 23 O -0.56 5.80 12.82 -148.98 -1.91 3.89 16 24 Si 0.76 -10.38 29.88 68.60 2.05 -8.33 16 25 C 0.01 -0.06 9.37 22.70 0.21 0.15 16 26 N -0.61 7.81 9.67 -191.58 -1.85 5.96 16 27 C -0.13 5.73 5.39 30.58 0.16 5.89 16 28 C -0.13 7.71 5.43 30.58 0.17 7.87 16 29 H 0.11 -6.02 8.14 -2.39 -0.02 -6.04 16 30 H 0.10 -5.29 8.14 -2.39 -0.02 -5.31 16 31 H 0.05 -1.54 8.14 -2.39 -0.02 -1.56 16 32 H 0.07 -3.03 8.14 -2.39 -0.02 -3.05 16 33 H 0.42 -12.12 8.72 -92.71 -0.81 -12.93 16 34 H 0.24 -6.14 8.06 -2.91 -0.02 -6.16 16 35 H 0.18 -2.17 7.56 -2.91 -0.02 -2.19 16 36 H 0.18 -2.20 4.87 -2.91 -0.01 -2.21 16 37 H 0.11 -1.93 7.96 -2.38 -0.02 -1.95 16 38 H 0.40 -7.23 8.74 -74.06 -0.65 -7.88 16 39 H -0.28 2.57 7.11 99.48 0.71 3.27 16 40 H -0.29 1.88 7.05 99.48 0.70 2.58 16 41 H 0.16 -1.60 7.64 -2.91 -0.02 -1.62 16 42 H 0.09 -3.99 8.14 -2.39 -0.02 -4.01 16 43 H 0.07 -2.67 8.14 -2.38 -0.02 -2.69 16 44 H 0.12 -6.92 8.14 -2.39 -0.02 -6.94 16 45 H 0.10 -5.53 8.14 -2.39 -0.02 -5.55 16 Total: 1.00 -97.58 366.20 -4.32 -101.91 By element: Atomic # 1 Polarization: -185.76 SS G_CDS: -2.75 Total: -188.51 kcal Atomic # 6 Polarization: -3.55 SS G_CDS: 8.34 Total: 4.79 kcal Atomic # 7 Polarization: 96.31 SS G_CDS: -10.05 Total: 86.25 kcal Atomic # 8 Polarization: 5.80 SS G_CDS: -1.91 Total: 3.89 kcal Atomic # 14 Polarization: -10.38 SS G_CDS: 2.05 Total: -8.33 kcal Total: -97.58 -4.32 -101.91 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081518_17087578.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 264.719 kcal (2) G-P(sol) polarization free energy of solvation -97.583 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 167.137 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.324 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -101.907 kcal (6) G-S(sol) free energy of system = (1) + (5) 162.812 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds