Wall clock time and date at job start Mon Mar 8 2021 06:19:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00901 * 1 3 3 H 1.00906 * 109.47114 * 1 2 4 4 H 1.00902 * 109.47309 * 240.00643 * 1 2 3 5 5 C 1.46901 * 109.47628 * 120.00217 * 1 2 3 6 6 H 1.09001 * 109.46874 * 300.00124 * 5 1 2 7 7 C 1.53000 * 109.46769 * 59.99844 * 5 1 2 8 8 C 1.52997 * 109.47060 * 180.02562 * 7 5 1 9 9 C 1.53006 * 109.47127 * 300.00449 * 8 7 5 10 10 H 1.09001 * 109.47002 * 299.99574 * 9 8 7 11 11 N 1.46504 * 109.46883 * 180.02562 * 9 8 7 12 12 C 1.34773 * 120.00111 * 84.99828 * 11 9 8 13 13 O 1.21534 * 120.00118 * 0.02562 * 12 11 9 14 14 C 1.48009 * 119.99719 * 179.97438 * 12 11 9 15 15 C 1.39862 * 120.06761 * 179.97438 * 14 12 11 16 16 C 1.38539 * 118.00379 * 180.02562 * 15 14 12 17 17 C 1.39697 * 118.00817 * 359.97438 * 16 15 14 18 18 C 1.48213 * 120.07230 * 180.02562 * 17 16 15 19 19 C 1.39394 * 120.54925 * 5.00035 * 18 17 16 20 20 N 1.31719 * 120.58948 * 180.02562 * 19 18 17 21 21 C 1.31901 * 121.85915 * 0.02562 * 20 19 18 22 22 C 1.38332 * 121.05401 * 359.97438 * 21 20 19 23 23 C 1.50694 * 120.35949 * 180.02562 * 22 21 20 24 24 O 1.42898 * 109.47515 * 119.99677 * 23 22 21 25 25 Si 1.86303 * 109.47167 * 359.97438 * 23 22 21 26 26 C 1.38388 * 119.28710 * 359.76490 * 22 21 20 27 27 N 1.33046 * 119.85598 * 0.02562 * 17 16 15 28 28 N 1.28359 * 122.13500 * 359.70569 * 27 17 16 29 29 C 1.52997 * 109.47164 * 59.99836 * 9 8 7 30 30 C 1.52996 * 109.47195 * 179.97438 * 5 1 2 31 31 H 1.09002 * 109.47398 * 300.00295 * 7 5 1 32 32 H 1.09001 * 109.47194 * 60.00475 * 7 5 1 33 33 H 1.08998 * 109.47533 * 59.99948 * 8 7 5 34 34 H 1.08996 * 109.47853 * 180.02562 * 8 7 5 35 35 H 0.97003 * 119.99624 * 264.99510 * 11 9 8 36 36 H 1.07996 * 121.00013 * 0.02970 * 15 14 12 37 37 H 1.07996 * 120.99514 * 179.97438 * 16 15 14 38 38 H 1.08005 * 119.70309 * 359.97438 * 19 18 17 39 39 H 1.08001 * 119.47446 * 180.02562 * 21 20 19 40 40 H 1.09005 * 109.46995 * 240.00344 * 23 22 21 41 41 H 0.96701 * 114.00007 * 299.99878 * 24 23 22 42 42 H 1.48500 * 110.00362 * 180.02562 * 25 23 22 43 43 H 1.48505 * 109.99754 * 301.32216 * 25 23 22 44 44 H 1.08004 * 120.84978 * 180.27502 * 26 22 21 45 45 H 1.09002 * 109.47045 * 180.02562 * 29 9 8 46 46 H 1.09001 * 109.47375 * 59.99966 * 29 9 8 47 47 H 1.08992 * 109.47554 * 299.99900 * 30 5 1 48 48 H 1.09004 * 109.47108 * 60.00150 * 30 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9514 0.0000 4 1 -0.3364 -0.4756 0.8239 5 6 -0.4898 -0.6925 -1.1994 6 1 -0.1265 -0.1787 -2.0894 7 6 0.0202 -2.1350 -1.1993 8 6 -0.4893 -2.8562 -2.4488 9 6 -2.0194 -2.8561 -2.4493 10 1 -2.3831 -3.3700 -1.5595 11 7 -2.5073 -3.5471 -3.6455 12 6 -2.6360 -4.8887 -3.6432 13 8 -2.3478 -5.5252 -2.6488 14 6 -3.1294 -5.5868 -4.8515 15 6 -3.2631 -6.9790 -4.8510 16 6 -3.7283 -7.5882 -6.0050 17 6 -4.0358 -6.7746 -7.0982 18 6 -4.5374 -7.3782 -8.3554 19 6 -4.8057 -8.7441 -8.4279 20 7 -5.2510 -9.2815 -9.5449 21 6 -5.4594 -8.5605 -10.6296 22 6 -5.2173 -7.1985 -10.6385 23 6 -5.4614 -6.3897 -11.8864 24 8 -6.4357 -5.3798 -11.6166 25 14 -6.0842 -7.5085 -13.2397 26 6 -4.7536 -6.5858 -9.4876 27 7 -3.8774 -5.4566 -7.0082 28 7 -3.4512 -4.8917 -5.9373 29 6 -2.5293 -1.4136 -2.4494 30 6 -2.0198 -0.6930 -1.1990 31 1 1.1102 -2.1351 -1.1993 32 1 -0.3431 -2.6488 -0.3093 33 1 -0.1257 -2.3423 -3.3386 34 1 -0.1265 -3.8839 -2.4486 35 1 -2.7377 -3.0391 -4.4390 36 1 -3.0113 -7.5616 -3.9772 37 1 -3.8495 -8.6600 -6.0580 38 1 -4.6461 -9.3676 -7.5605 39 1 -5.8258 -9.0409 -11.5248 40 1 -4.5299 -5.9206 -12.2033 41 1 -7.2916 -5.7259 -11.3289 42 1 -6.3283 -6.7230 -14.4760 43 1 -5.0934 -8.5817 -13.5076 44 1 -4.5604 -5.5234 -9.4651 45 1 -3.6193 -1.4135 -2.4494 46 1 -2.1656 -0.8996 -3.3392 47 1 -2.3827 -1.2070 -0.3090 48 1 -2.3834 0.3346 -1.1988 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081518_17088014.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:19:25 Heat of formation + Delta-G solvation = 142.685353 kcal Electronic energy + Delta-G solvation = -30489.733634 eV Core-core repulsion = 26244.389321 eV Total energy + Delta-G solvation = -4245.344312 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.171 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -43.61360 -43.24795 -42.14667 -41.50002 -39.29950 -38.57690 -36.42945 -35.83646 -35.24769 -34.22138 -33.99988 -32.69462 -31.17864 -28.24821 -27.61494 -26.94106 -26.16389 -25.56467 -24.70160 -23.80730 -23.41117 -22.97876 -21.49046 -21.21774 -20.45566 -19.91807 -19.72260 -19.38822 -18.73329 -18.54172 -18.33134 -17.82521 -17.73620 -17.47059 -17.26308 -16.94325 -16.77179 -16.43516 -16.26247 -16.16295 -15.94116 -15.62659 -15.40051 -15.27839 -15.23764 -14.90879 -14.82592 -14.76908 -14.54295 -14.21835 -14.12242 -13.71316 -13.54496 -13.28781 -13.18383 -12.78175 -12.59404 -12.33238 -12.31887 -11.89410 -11.52266 -11.47185 -11.23882 -11.08162 -10.61469 -5.63164 -1.98862 -1.26801 -1.21823 -0.75438 -0.52396 0.54670 0.58987 0.62921 0.66694 0.72237 0.82654 1.03631 1.40648 1.45673 1.52213 1.57886 1.59194 1.66989 1.94796 1.99338 2.04105 2.07490 2.18648 2.31923 2.38064 2.38332 2.43880 2.58868 2.67111 2.68909 2.76197 2.78372 2.83149 2.87598 2.89531 2.99769 3.02900 3.14051 3.16586 3.27228 3.44639 3.48338 3.59361 3.64070 3.66788 3.83523 3.87026 3.97190 4.06346 4.28419 4.34205 4.71588 5.11907 5.82931 5.89323 6.06413 6.47202 Molecular weight = 357.17amu Principal moments of inertia in cm(-1) A = 0.020398 B = 0.001821 C = 0.001707 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1372.336222 B =15372.307017 C =16401.701544 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.437 0.563 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.139 4.139 8 C -0.132 4.132 9 C 0.139 3.861 10 H 0.098 0.902 11 N -0.711 5.711 12 C 0.588 3.412 13 O -0.520 6.520 14 C 0.006 3.994 15 C -0.053 4.053 16 C -0.113 4.113 17 C 0.146 3.854 18 C -0.119 4.119 19 C 0.137 3.863 20 N -0.472 5.472 21 C 0.126 3.874 22 C -0.176 4.176 23 C -0.063 4.063 24 O -0.536 6.536 25 Si 0.686 3.314 26 C -0.001 4.001 27 N -0.229 5.229 28 N -0.201 5.201 29 C -0.128 4.128 30 C -0.137 4.137 31 H 0.093 0.907 32 H 0.092 0.908 33 H 0.080 0.920 34 H 0.092 0.908 35 H 0.416 0.584 36 H 0.169 0.831 37 H 0.166 0.834 38 H 0.165 0.835 39 H 0.164 0.836 40 H 0.120 0.880 41 H 0.381 0.619 42 H -0.247 1.247 43 H -0.252 1.252 44 H 0.154 0.846 45 H 0.095 0.905 46 H 0.085 0.915 47 H 0.093 0.907 48 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 13.654 22.509 27.928 38.381 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.266 0.734 4 H 0.263 0.737 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.177 4.177 8 C -0.171 4.171 9 C 0.034 3.966 10 H 0.116 0.884 11 N -0.363 5.363 12 C 0.371 3.629 13 O -0.394 6.394 14 C -0.140 4.140 15 C -0.082 4.082 16 C -0.141 4.141 17 C 0.005 3.995 18 C -0.123 4.123 19 C -0.022 4.022 20 N -0.179 5.179 21 C -0.030 4.030 22 C -0.178 4.178 23 C -0.174 4.174 24 O -0.341 6.341 25 Si 0.586 3.414 26 C -0.027 4.027 27 N -0.074 5.074 28 N -0.048 5.048 29 C -0.166 4.166 30 C -0.176 4.176 31 H 0.112 0.888 32 H 0.111 0.889 33 H 0.099 0.901 34 H 0.110 0.890 35 H 0.254 0.746 36 H 0.186 0.814 37 H 0.183 0.817 38 H 0.182 0.818 39 H 0.181 0.819 40 H 0.138 0.862 41 H 0.229 0.771 42 H -0.171 1.171 43 H -0.177 1.177 44 H 0.171 0.829 45 H 0.114 0.886 46 H 0.104 0.896 47 H 0.111 0.889 48 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 14.128 22.577 26.718 37.725 hybrid contribution 0.838 0.150 0.918 1.252 sum 14.966 22.727 27.636 38.785 Atomic orbital electron populations 1.42646 1.21241 1.20649 1.18830 0.73389 0.73427 0.73750 1.23592 0.99506 0.97613 0.87302 0.83812 1.22044 1.02734 0.90656 1.02270 1.21947 0.95595 1.02943 0.96663 1.21076 0.93201 0.92438 0.89836 0.88370 1.45766 1.66765 1.06642 1.17153 1.17505 0.77300 0.82195 0.85884 1.90853 1.49448 1.66085 1.33027 1.22631 1.02178 0.93428 0.95738 1.22402 0.92361 0.93973 0.99417 1.22491 0.96713 1.02955 0.91978 1.21319 0.92937 0.91655 0.93590 1.19319 1.05528 0.95000 0.92450 1.23036 0.91906 0.90976 0.96306 1.67801 1.11964 1.38995 0.99138 1.22948 0.93290 0.90180 0.96549 1.21470 1.02802 0.95739 0.97783 1.24992 0.96102 0.96428 0.99924 1.86538 1.24577 1.32979 1.90013 0.94781 0.88852 0.79301 0.78418 1.21679 0.89905 1.01199 0.89904 1.73357 1.09598 1.08943 1.15529 1.73168 1.04805 1.31478 0.95369 1.21783 1.03444 0.94048 0.97363 1.22028 0.89541 1.04110 1.01895 0.88811 0.88944 0.90108 0.88964 0.74646 0.81361 0.81652 0.81790 0.81893 0.86232 0.77131 1.17140 1.17671 0.82869 0.88601 0.89618 0.88883 0.88535 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.00 4.15 -4.67 -0.02 23.98 16 2 H 0.44 -17.12 8.96 -39.29 -0.35 -17.48 16 3 H 0.44 -17.20 8.96 -39.29 -0.35 -17.55 16 4 H 0.43 -16.76 8.90 -39.29 -0.35 -17.11 16 5 C 0.02 -0.75 3.02 -67.71 -0.20 -0.95 16 6 H 0.14 -4.58 8.14 -51.93 -0.42 -5.01 16 7 C -0.14 3.76 5.43 -26.73 -0.15 3.62 16 8 C -0.13 2.80 5.49 -26.73 -0.15 2.65 16 9 C 0.14 -2.70 2.45 -67.93 -0.17 -2.86 16 10 H 0.10 -1.76 7.57 -51.93 -0.39 -2.16 16 11 N -0.71 10.74 5.07 -54.69 -0.28 10.46 16 12 C 0.59 -6.52 7.77 -12.26 -0.10 -6.62 16 13 O -0.52 4.58 16.04 5.34 0.09 4.67 16 14 C 0.01 -0.06 6.83 -82.80 -0.57 -0.62 16 15 C -0.05 0.55 9.71 -38.86 -0.38 0.17 16 16 C -0.11 1.18 9.54 -38.93 -0.37 0.81 16 17 C 0.15 -1.20 6.81 -82.70 -0.56 -1.76 16 18 C -0.12 0.93 5.89 -104.76 -0.62 0.31 16 19 C 0.14 -1.10 10.60 -17.17 -0.18 -1.28 16 20 N -0.47 2.87 10.35 -12.95 -0.13 2.74 16 21 C 0.13 -0.91 9.84 -17.49 -0.17 -1.08 16 22 C -0.18 1.33 5.39 -104.53 -0.56 0.77 16 23 C -0.06 0.49 2.83 36.00 0.10 0.60 16 24 O -0.54 3.89 12.77 -35.23 -0.45 3.44 16 25 Si 0.69 -5.50 29.82 -169.99 -5.07 -10.57 16 26 C 0.00 0.00 9.29 -38.92 -0.36 -0.36 16 27 N -0.23 1.60 10.72 33.37 0.36 1.96 16 28 N -0.20 1.68 10.73 33.33 0.36 2.04 16 29 C -0.13 2.91 5.40 -26.71 -0.14 2.77 16 30 C -0.14 3.86 5.43 -26.71 -0.15 3.71 16 31 H 0.09 -2.60 8.14 -51.93 -0.42 -3.02 16 32 H 0.09 -2.50 8.14 -51.93 -0.42 -2.92 16 33 H 0.08 -1.70 8.14 -51.93 -0.42 -2.13 16 34 H 0.09 -1.60 8.14 -51.93 -0.42 -2.02 16 35 H 0.42 -6.46 7.95 -40.82 -0.32 -6.78 16 36 H 0.17 -1.98 7.71 -52.49 -0.40 -2.39 16 37 H 0.17 -2.22 6.34 -52.49 -0.33 -2.55 16 38 H 0.17 -1.83 6.28 -52.48 -0.33 -2.16 16 39 H 0.16 -1.46 4.88 -52.49 -0.26 -1.72 16 40 H 0.12 -0.91 7.96 -51.93 -0.41 -1.33 16 41 H 0.38 -4.18 8.70 45.56 0.40 -3.78 16 42 H -0.25 1.08 7.11 56.52 0.40 1.48 16 43 H -0.25 1.44 7.11 56.52 0.40 1.85 16 44 H 0.15 -1.10 7.66 -52.48 -0.40 -1.50 16 45 H 0.10 -1.98 8.14 -51.93 -0.42 -2.40 16 46 H 0.09 -1.96 8.14 -51.93 -0.42 -2.38 16 47 H 0.09 -2.61 8.14 -51.93 -0.42 -3.03 16 48 H 0.10 -2.79 8.14 -51.93 -0.42 -3.21 16 LS Contribution 390.78 15.07 5.89 5.89 Total: 1.00 -44.33 390.78 -10.50 -54.83 By element: Atomic # 1 Polarization: -92.79 SS G_CDS: -6.52 Total: -99.30 kcal Atomic # 6 Polarization: 4.58 SS G_CDS: -4.72 Total: -0.14 kcal Atomic # 7 Polarization: 40.90 SS G_CDS: 0.28 Total: 41.18 kcal Atomic # 8 Polarization: 8.47 SS G_CDS: -0.36 Total: 8.11 kcal Atomic # 14 Polarization: -5.50 SS G_CDS: -5.07 Total: -10.57 kcal Total LS contribution 5.89 Total: 5.89 kcal Total: -44.33 -10.50 -54.83 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081518_17088014.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 197.513 kcal (2) G-P(sol) polarization free energy of solvation -44.331 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 153.181 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.496 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -54.827 kcal (6) G-S(sol) free energy of system = (1) + (5) 142.685 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds