Wall clock time and date at job start Mon Mar 8 2021 06:53:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00903 * 1 3 3 H 1.00905 * 109.46567 * 1 2 4 4 H 1.00901 * 109.47392 * 240.00864 * 1 2 3 5 5 C 1.46896 * 109.47465 * 119.99669 * 1 2 3 6 6 H 1.09002 * 109.47220 * 300.00631 * 5 1 2 7 7 C 1.52997 * 109.46848 * 60.00561 * 5 1 2 8 8 C 1.52999 * 109.47317 * 179.97438 * 7 5 1 9 9 C 1.53005 * 109.47159 * 300.00546 * 8 7 5 10 10 H 1.09002 * 109.46935 * 299.99411 * 9 8 7 11 11 N 1.46500 * 109.47094 * 179.97438 * 9 8 7 12 12 C 1.38551 * 120.00284 * 154.99496 * 11 9 8 13 13 C 1.39709 * 120.48095 * 359.72719 * 12 11 9 14 14 C 1.38215 * 118.49627 * 179.70770 * 13 12 11 15 15 N 1.32400 * 119.29686 * 0.56250 * 14 13 12 16 16 C 1.32588 * 120.92712 * 359.72609 * 15 14 13 17 17 C 1.48315 * 119.17848 * 180.02562 * 16 15 14 18 18 C 1.39766 * 120.54389 * 359.70003 * 17 16 15 19 19 C 1.38448 * 118.30759 * 179.71811 * 18 17 16 20 20 C 1.38277 * 119.28817 * 0.57484 * 19 18 17 21 21 C 1.50695 * 119.48300 * 179.70622 * 20 19 18 22 22 O 1.42899 * 109.47071 * 29.97522 * 21 20 19 23 23 Si 1.86294 * 109.47271 * 149.97586 * 21 20 19 24 24 N 1.31929 * 121.03324 * 359.67677 * 20 19 18 25 25 C 1.31706 * 121.85959 * 0.03129 * 24 20 19 26 26 N 1.32561 * 121.63643 * 359.96726 * 16 15 14 27 27 C 1.52997 * 109.47452 * 59.99536 * 9 8 7 28 28 C 1.53000 * 109.47053 * 180.02562 * 5 1 2 29 29 H 1.08996 * 109.47853 * 300.00000 * 7 5 1 30 30 H 1.09002 * 109.47153 * 60.00028 * 7 5 1 31 31 H 1.09002 * 109.46716 * 60.00091 * 8 7 5 32 32 H 1.09000 * 109.47486 * 180.02562 * 8 7 5 33 33 H 0.97002 * 120.00110 * 335.00521 * 11 9 8 34 34 H 1.08005 * 120.75349 * 359.97438 * 13 12 11 35 35 H 1.08002 * 120.35073 * 180.26245 * 14 13 12 36 36 H 1.08004 * 120.84285 * 359.97438 * 18 17 16 37 37 H 1.08003 * 120.35763 * 180.27717 * 19 18 17 38 38 H 1.08999 * 109.46883 * 269.97713 * 21 20 19 39 39 H 0.96693 * 114.00162 * 59.99998 * 22 21 20 40 40 H 1.48501 * 109.99931 * 179.97438 * 23 21 20 41 41 H 1.48499 * 110.00317 * 301.31682 * 23 21 20 42 42 H 1.07999 * 119.70229 * 179.97438 * 25 24 20 43 43 H 1.09002 * 109.46695 * 59.99734 * 27 9 8 44 44 H 1.08993 * 109.47194 * 179.97438 * 27 9 8 45 45 H 1.08992 * 109.47399 * 300.00238 * 28 5 1 46 46 H 1.09004 * 109.46724 * 60.00724 * 28 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3363 0.9514 0.0000 4 1 -0.3364 -0.4755 0.8239 5 6 -0.4897 -0.6924 -1.1994 6 1 -0.1263 -0.1786 -2.0894 7 6 0.0201 -2.1349 -1.1994 8 6 -0.4904 -2.8564 -2.4483 9 6 -2.0205 -2.8561 -2.4477 10 1 -2.3835 -3.3698 -1.5575 11 7 -2.5093 -3.5464 -3.6439 12 6 -3.7655 -4.1308 -3.6418 13 6 -4.5722 -4.0728 -2.5026 14 6 -5.8206 -4.6643 -2.5477 15 7 -6.2088 -5.2741 -3.6569 16 6 -5.4200 -5.3191 -4.7217 17 6 -5.8943 -6.0121 -5.9442 18 6 -7.1541 -6.6167 -5.9745 19 6 -7.5525 -7.2457 -7.1417 20 6 -6.6946 -7.2660 -8.2260 21 6 -7.1212 -7.9553 -9.4964 22 8 -8.5423 -7.8791 -9.6255 23 14 -6.3194 -7.1197 -10.9556 24 7 -5.5088 -6.6910 -8.1659 25 6 -5.0886 -6.0760 -7.0797 26 7 -4.2185 -4.7591 -4.7210 27 6 -2.5303 -1.4136 -2.4478 28 6 -2.0197 -0.6918 -1.1996 29 1 1.1101 -2.1351 -1.1994 30 1 -0.3433 -2.6487 -0.3094 31 1 -0.1274 -2.3427 -3.3385 32 1 -0.1276 -3.8842 -2.4481 33 1 -1.9534 -3.5944 -4.4374 34 1 -4.2299 -3.5733 -1.6083 35 1 -6.4705 -4.6337 -1.6857 36 1 -7.8019 -6.5901 -5.1107 37 1 -8.5211 -7.7196 -7.2031 38 1 -6.8149 -9.0008 -9.4629 39 1 -8.8861 -6.9761 -9.6616 40 1 -6.7316 -7.7905 -12.2147 41 1 -6.7037 -5.6858 -10.9942 42 1 -4.1110 -5.6173 -7.0687 43 1 -2.1672 -0.9000 -3.3380 44 1 -3.6203 -1.4135 -2.4478 45 1 -2.3834 -1.2053 -0.3097 46 1 -2.3826 0.3361 -1.1999 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081524_17085348.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:53:49 Heat of formation + Delta-G solvation = 172.274323 kcal Electronic energy + Delta-G solvation = -27217.641746 eV Core-core repulsion = 23420.488840 eV Total energy + Delta-G solvation = -3797.152906 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.172 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -43.69202 -42.94342 -41.84283 -40.24659 -38.49726 -37.29007 -35.43612 -34.60121 -34.16608 -33.43957 -32.23970 -30.85755 -28.53286 -26.55642 -26.09606 -26.04612 -24.85114 -24.68279 -23.64108 -23.01629 -21.53288 -21.31537 -20.20618 -20.01153 -19.78797 -19.30253 -18.34901 -18.01531 -17.63144 -17.53089 -17.44424 -17.12184 -16.99671 -16.93353 -16.74729 -16.25088 -15.99129 -15.80749 -15.53990 -15.48454 -15.12093 -14.92307 -14.78370 -14.68267 -14.49651 -14.36152 -14.01236 -13.85149 -13.46623 -13.18022 -13.08727 -12.70514 -12.36960 -12.35389 -11.50878 -11.39054 -11.23360 -11.02131 -10.59044 -10.14301 -5.17185 -1.48379 -1.32008 -0.58712 -0.38091 -0.22798 0.49996 0.55109 0.61134 0.73200 0.88946 1.31495 1.35353 1.45680 1.53648 1.56401 1.80419 1.80739 1.91053 1.93155 2.04349 2.17419 2.21502 2.31517 2.33707 2.42832 2.49875 2.50857 2.64078 2.71519 2.72948 2.75535 3.00642 3.11213 3.13157 3.21789 3.29077 3.30762 3.36980 3.43388 3.48764 3.64709 3.71541 4.03994 4.09733 4.16094 4.42913 4.52748 4.66515 4.95153 5.06106 5.41236 5.78789 6.23383 6.31603 Molecular weight = 329.17amu Principal moments of inertia in cm(-1) A = 0.025230 B = 0.002297 C = 0.002166 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1109.535326 B =12186.870355 C =12921.617647 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.438 0.562 3 H 0.438 0.562 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.137 4.137 8 C -0.127 4.127 9 C 0.150 3.850 10 H 0.091 0.909 11 N -0.712 5.712 12 C 0.444 3.556 13 C -0.302 4.302 14 C 0.188 3.812 15 N -0.547 5.547 16 C 0.418 3.582 17 C -0.111 4.111 18 C -0.019 4.019 19 C -0.164 4.164 20 C 0.117 3.883 21 C -0.077 4.077 22 O -0.527 6.527 23 Si 0.727 3.273 24 N -0.477 5.477 25 C 0.161 3.839 26 N -0.568 5.568 27 C -0.138 4.138 28 C -0.140 4.140 29 H 0.097 0.903 30 H 0.092 0.908 31 H 0.085 0.915 32 H 0.096 0.904 33 H 0.412 0.588 34 H 0.140 0.860 35 H 0.171 0.829 36 H 0.152 0.848 37 H 0.150 0.850 38 H 0.133 0.867 39 H 0.378 0.622 40 H -0.258 1.258 41 H -0.267 1.267 42 H 0.172 0.828 43 H 0.083 0.917 44 H 0.090 0.910 45 H 0.091 0.909 46 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 23.191 23.386 26.505 42.276 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.267 0.733 3 H 0.267 0.733 4 H 0.262 0.738 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.176 4.176 8 C -0.165 4.165 9 C 0.044 3.956 10 H 0.109 0.891 11 N -0.345 5.345 12 C 0.200 3.800 13 C -0.330 4.330 14 C 0.024 3.976 15 N -0.265 5.265 16 C 0.152 3.848 17 C -0.115 4.115 18 C -0.046 4.046 19 C -0.184 4.184 20 C -0.019 4.019 21 C -0.187 4.187 22 O -0.333 6.333 23 Si 0.626 3.374 24 N -0.187 5.187 25 C 0.001 3.999 26 N -0.291 5.291 27 C -0.178 4.178 28 C -0.178 4.178 29 H 0.115 0.885 30 H 0.111 0.889 31 H 0.104 0.896 32 H 0.114 0.886 33 H 0.249 0.751 34 H 0.158 0.842 35 H 0.188 0.812 36 H 0.169 0.831 37 H 0.167 0.833 38 H 0.151 0.849 39 H 0.226 0.774 40 H -0.183 1.183 41 H -0.191 1.191 42 H 0.189 0.811 43 H 0.101 0.899 44 H 0.109 0.891 45 H 0.110 0.890 46 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 23.273 22.637 24.202 40.494 hybrid contribution -0.913 1.151 2.160 2.612 sum 22.360 23.789 26.362 41.962 Atomic orbital electron populations 1.42641 1.21271 1.20736 1.18753 0.73348 0.73338 0.73759 1.23580 0.99569 0.97485 0.87401 0.83792 1.22020 1.02965 0.90790 1.01802 1.21748 0.94134 1.03245 0.97421 1.21052 0.93512 0.91943 0.89098 0.89091 1.44311 1.14888 1.58738 1.16594 1.18311 0.85853 0.86880 0.88965 1.22134 0.98464 1.12404 0.99986 1.22984 0.92543 0.86939 0.95098 1.68389 1.36146 1.21400 1.00556 1.20688 0.84183 0.88703 0.91216 1.19048 0.96658 1.03223 0.92550 1.21818 0.94025 0.90607 0.98132 1.21923 1.02361 1.01391 0.92711 1.21961 0.90135 0.93543 0.96306 1.25083 0.85660 1.06750 1.01162 1.86631 1.18635 1.32813 1.95183 0.93567 0.91377 0.78027 0.74424 1.67050 1.15109 1.09520 1.27062 1.22954 0.99040 0.91815 0.86103 1.67744 1.16920 1.16154 1.28306 1.22065 1.03402 0.95373 0.96932 1.22047 0.89457 1.04222 1.02077 0.88470 0.88904 0.89618 0.88552 0.75091 0.84240 0.81199 0.83077 0.83278 0.84949 0.77438 1.18313 1.19133 0.81080 0.89867 0.89102 0.89040 0.88727 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.80 4.15 -4.67 -0.02 24.78 16 2 H 0.44 -17.68 8.96 -39.29 -0.35 -18.04 16 3 H 0.44 -17.64 8.96 -39.29 -0.35 -17.99 16 4 H 0.43 -17.35 8.90 -39.29 -0.35 -17.70 16 5 C 0.02 -0.78 3.02 -67.72 -0.20 -0.99 16 6 H 0.14 -4.77 8.14 -51.93 -0.42 -5.19 16 7 C -0.14 4.07 5.43 -26.73 -0.15 3.93 16 8 C -0.13 3.10 5.39 -26.73 -0.14 2.95 16 9 C 0.15 -3.28 2.16 -67.93 -0.15 -3.43 16 10 H 0.09 -1.99 6.49 -51.93 -0.34 -2.33 16 11 N -0.71 11.88 5.23 -53.79 -0.28 11.60 16 12 C 0.44 -5.41 7.69 -154.86 -1.19 -6.60 16 13 C -0.30 4.04 8.95 -39.04 -0.35 3.69 16 14 C 0.19 -2.03 11.28 -17.32 -0.20 -2.23 16 15 N -0.55 4.01 9.52 -11.22 -0.11 3.91 16 16 C 0.42 -2.89 7.56 -156.98 -1.19 -4.07 16 17 C -0.11 0.69 5.89 -104.76 -0.62 0.07 16 18 C -0.02 0.12 9.68 -38.93 -0.38 -0.26 16 19 C -0.16 1.02 9.37 -39.49 -0.37 0.65 16 20 C 0.12 -0.65 6.08 -82.54 -0.50 -1.15 16 21 C -0.08 0.45 2.98 36.00 0.11 0.56 16 22 O -0.53 2.71 11.84 -35.23 -0.42 2.30 16 23 Si 0.73 -3.98 31.87 -169.99 -5.42 -9.39 16 24 N -0.48 2.56 8.35 -9.19 -0.08 2.49 16 25 C 0.16 -1.03 10.74 -17.18 -0.18 -1.21 16 26 N -0.57 4.93 9.51 -10.38 -0.10 4.83 16 27 C -0.14 3.25 5.47 -26.75 -0.15 3.10 16 28 C -0.14 4.08 5.43 -26.75 -0.15 3.94 16 29 H 0.10 -2.92 8.14 -51.93 -0.42 -3.35 16 30 H 0.09 -2.77 8.14 -51.93 -0.42 -3.19 16 31 H 0.09 -2.06 8.14 -51.93 -0.42 -2.49 16 32 H 0.10 -2.12 8.14 -51.93 -0.42 -2.54 16 33 H 0.41 -6.81 8.73 -40.82 -0.36 -7.17 16 34 H 0.14 -2.42 6.33 -52.48 -0.33 -2.75 16 35 H 0.17 -2.32 8.06 -52.49 -0.42 -2.74 16 36 H 0.15 -1.10 7.60 -52.48 -0.40 -1.50 16 37 H 0.15 -1.06 7.47 -52.48 -0.39 -1.45 16 38 H 0.13 -0.88 7.96 -51.93 -0.41 -1.29 16 39 H 0.38 -3.03 8.70 45.56 0.40 -2.63 16 40 H -0.26 0.66 7.11 56.52 0.40 1.06 16 41 H -0.27 0.80 7.11 56.52 0.40 1.20 16 42 H 0.17 -1.39 7.52 -52.49 -0.39 -1.78 16 43 H 0.08 -1.88 8.14 -51.93 -0.42 -2.30 16 44 H 0.09 -1.86 7.80 -51.93 -0.41 -2.26 16 45 H 0.09 -2.72 8.14 -51.93 -0.42 -3.14 16 46 H 0.09 -2.79 8.14 -51.93 -0.42 -3.21 16 LS Contribution 370.42 15.07 5.58 5.58 Total: 1.00 -44.42 370.42 -13.32 -57.75 By element: Atomic # 1 Polarization: -96.10 SS G_CDS: -6.69 Total: -102.79 kcal Atomic # 6 Polarization: 4.75 SS G_CDS: -5.80 Total: -1.05 kcal Atomic # 7 Polarization: 48.19 SS G_CDS: -0.58 Total: 47.61 kcal Atomic # 8 Polarization: 2.71 SS G_CDS: -0.42 Total: 2.30 kcal Atomic # 14 Polarization: -3.98 SS G_CDS: -5.42 Total: -9.39 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -44.42 -13.32 -57.75 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081524_17085348.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 230.019 kcal (2) G-P(sol) polarization free energy of solvation -44.423 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 185.597 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.322 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -57.745 kcal (6) G-S(sol) free energy of system = (1) + (5) 172.274 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds