Wall clock time and date at job start Mon Mar 8 2021 07:04:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00903 * 1 3 3 H 1.00896 * 109.46820 * 1 2 4 4 H 1.00897 * 109.47071 * 240.00014 * 1 2 3 5 5 C 1.46891 * 109.47333 * 119.99842 * 1 2 3 6 6 H 1.09000 * 109.47257 * 300.00233 * 5 1 2 7 7 C 1.53007 * 109.46924 * 60.00282 * 5 1 2 8 8 C 1.53006 * 109.46776 * 179.97438 * 7 5 1 9 9 C 1.52998 * 109.47281 * 299.99637 * 8 7 5 10 10 H 1.09000 * 109.47254 * 300.00406 * 9 8 7 11 11 N 1.46497 * 109.46807 * 179.97438 * 9 8 7 12 12 C 1.38417 * 119.99527 * 154.99987 * 11 9 8 13 13 N 1.32505 * 119.15593 * 0.02562 * 12 11 9 14 14 C 1.32374 * 120.97973 * 180.02562 * 13 12 11 15 15 C 1.38336 * 119.28853 * 359.97438 * 14 13 12 16 16 C 1.39748 * 118.44458 * 0.02562 * 15 14 13 17 17 C 1.48311 * 120.50657 * 180.02562 * 16 15 14 18 18 C 1.39776 * 120.54571 * 180.02562 * 17 16 15 19 19 C 1.38440 * 118.31133 * 179.97438 * 18 17 16 20 20 C 1.38280 * 119.28559 * 0.02562 * 19 18 17 21 21 C 1.50701 * 119.47811 * 179.97438 * 20 19 18 22 22 O 1.42896 * 109.47417 * 29.99709 * 21 20 19 23 23 Si 1.86301 * 109.47149 * 149.99725 * 21 20 19 24 24 N 1.31926 * 121.04174 * 0.26603 * 20 19 18 25 25 C 1.31712 * 121.85522 * 359.44493 * 24 20 19 26 26 N 1.32380 * 119.15214 * 180.29991 * 12 11 9 27 27 C 1.52995 * 109.46626 * 60.00527 * 9 8 7 28 28 C 1.52992 * 109.47466 * 180.02562 * 5 1 2 29 29 H 1.09000 * 109.47194 * 59.99911 * 7 5 1 30 30 H 1.09005 * 109.47159 * 299.99561 * 7 5 1 31 31 H 1.09006 * 109.46355 * 179.97438 * 8 7 5 32 32 H 1.09000 * 109.47308 * 60.00010 * 8 7 5 33 33 H 0.96996 * 120.00867 * 335.00478 * 11 9 8 34 34 H 1.08004 * 120.35677 * 180.02562 * 14 13 12 35 35 H 1.07999 * 120.77352 * 179.97438 * 15 14 13 36 36 H 1.07998 * 120.83885 * 359.96141 * 18 17 16 37 37 H 1.07999 * 120.35515 * 180.02562 * 19 18 17 38 38 H 1.09002 * 109.47060 * 269.99736 * 21 20 19 39 39 H 0.96699 * 114.00604 * 179.97438 * 22 21 20 40 40 H 1.48498 * 110.00005 * 299.99971 * 23 21 20 41 41 H 1.48501 * 110.00049 * 61.31633 * 23 21 20 42 42 H 1.07998 * 119.70608 * 180.28765 * 25 24 20 43 43 H 1.09000 * 109.47403 * 59.99970 * 27 9 8 44 44 H 1.09005 * 109.46866 * 180.02562 * 27 9 8 45 45 H 1.09000 * 109.47042 * 300.00328 * 28 5 1 46 46 H 1.08998 * 109.47399 * 59.99974 * 28 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3363 0.9513 0.0000 4 1 -0.3363 -0.4756 0.8238 5 6 -0.4897 -0.6924 -1.1994 6 1 -0.1264 -0.1786 -2.0894 7 6 0.0203 -2.1350 -1.1993 8 6 -0.4903 -2.8564 -2.4483 9 6 -2.0203 -2.8564 -2.4476 10 1 -2.3833 -3.3700 -1.5574 11 7 -2.5091 -3.5466 -3.6438 12 6 -3.7641 -4.1305 -3.6416 13 7 -4.5094 -4.0547 -2.5487 14 6 -5.7146 -4.6005 -2.5066 15 6 -6.1989 -5.2584 -3.6230 16 6 -5.3903 -5.3222 -4.7610 17 6 -5.8642 -6.0156 -5.9834 18 6 -5.0559 -6.0803 -7.1219 19 6 -5.5441 -6.7395 -8.2371 20 6 -6.8041 -7.3070 -8.1897 21 6 -7.3401 -8.0251 -9.4014 22 8 -6.2548 -8.5926 -10.1376 23 14 -8.4980 -9.3800 -8.8587 24 7 -7.5468 -7.2248 -7.1025 25 6 -7.1231 -6.6130 -6.0158 26 7 -4.1867 -4.7551 -4.7296 27 6 -2.5302 -1.4139 -2.4477 28 6 -2.0196 -0.6919 -1.1997 29 1 -0.3431 -2.6488 -0.3094 30 1 1.1103 -2.1350 -1.1994 31 1 -0.1266 -3.8840 -2.4485 32 1 -0.1274 -2.3427 -3.3385 33 1 -1.9534 -3.5945 -4.4374 34 1 -6.3138 -4.5323 -1.6106 35 1 -7.1786 -5.7128 -3.6150 36 1 -4.0755 -5.6274 -7.1313 37 1 -4.9472 -6.8097 -9.1344 38 1 -7.8782 -7.3190 -10.0338 39 1 -6.5265 -9.0716 -10.9325 40 1 -7.7764 -10.3494 -7.9958 41 1 -9.6477 -8.7996 -8.1193 42 1 -7.7583 -6.5704 -5.1434 43 1 -2.1672 -0.9002 -3.3379 44 1 -3.6202 -1.4138 -2.4467 45 1 -2.3833 -1.2054 -0.3097 46 1 -2.3826 0.3359 -1.1999 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081524_17085550.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:04:38 Heat of formation + Delta-G solvation = 174.990699 kcal Electronic energy + Delta-G solvation = -27194.514760 eV Core-core repulsion = 23397.479645 eV Total energy + Delta-G solvation = -3797.035115 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.172 amu Computer time = 1.99 seconds Orbital eigenvalues (eV) -43.53149 -42.93926 -41.90494 -39.95877 -38.42147 -36.90020 -36.09820 -34.14002 -33.99181 -33.88247 -32.33791 -30.58841 -28.61018 -26.39613 -26.13426 -25.78137 -25.26953 -24.22116 -23.53655 -23.00211 -21.40977 -21.21234 -20.19766 -19.89867 -19.63142 -19.06995 -18.61153 -18.10526 -17.51517 -17.47438 -17.36451 -17.22752 -17.03336 -16.74413 -16.57629 -16.07085 -15.84888 -15.65345 -15.59056 -15.37768 -15.22370 -14.96790 -14.74061 -14.51552 -14.37385 -14.18682 -13.98484 -13.69597 -13.22821 -13.20220 -12.99748 -12.85204 -12.57274 -12.41283 -11.50190 -11.45971 -11.11757 -11.06405 -10.47830 -10.06228 -5.34839 -1.50616 -1.21389 -0.69938 -0.46652 -0.15184 0.57443 0.67433 0.72942 0.82885 0.84270 1.33444 1.47470 1.57623 1.66059 1.70967 1.84628 1.95148 2.00747 2.06359 2.16458 2.21469 2.26931 2.31959 2.41780 2.46170 2.57375 2.70009 2.85261 2.86566 2.93715 2.95537 3.05396 3.17514 3.19273 3.26618 3.31931 3.40516 3.48354 3.53795 3.58494 3.69748 3.79861 3.93290 4.03378 4.19620 4.37587 4.39691 4.80498 4.85609 5.04127 5.37893 5.97855 6.09460 6.33621 Molecular weight = 329.17amu Principal moments of inertia in cm(-1) A = 0.031574 B = 0.002206 C = 0.002110 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 886.595035 B =12689.533313 C =13269.197581 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.437 0.563 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.143 0.857 7 C -0.136 4.136 8 C -0.129 4.129 9 C 0.161 3.839 10 H 0.098 0.902 11 N -0.700 5.700 12 C 0.569 3.431 13 N -0.574 5.574 14 C 0.198 3.802 15 C -0.274 4.274 16 C 0.274 3.726 17 C -0.123 4.123 18 C -0.024 4.024 19 C -0.148 4.148 20 C 0.155 3.845 21 C -0.073 4.073 22 O -0.550 6.550 23 Si 0.717 3.283 24 N -0.484 5.484 25 C 0.142 3.858 26 N -0.565 5.565 27 C -0.131 4.131 28 C -0.138 4.138 29 H 0.092 0.908 30 H 0.095 0.905 31 H 0.093 0.907 32 H 0.082 0.918 33 H 0.416 0.584 34 H 0.174 0.826 35 H 0.150 0.850 36 H 0.149 0.851 37 H 0.151 0.849 38 H 0.091 0.909 39 H 0.393 0.607 40 H -0.262 1.262 41 H -0.245 1.245 42 H 0.167 0.833 43 H 0.075 0.925 44 H 0.090 0.910 45 H 0.092 0.908 46 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 19.657 21.925 19.635 35.393 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.265 0.735 3 H 0.266 0.734 4 H 0.262 0.738 5 C -0.080 4.080 6 H 0.161 0.839 7 C -0.174 4.174 8 C -0.168 4.168 9 C 0.054 3.946 10 H 0.116 0.884 11 N -0.338 5.338 12 C 0.212 3.788 13 N -0.297 5.297 14 C 0.032 3.968 15 C -0.299 4.299 16 C 0.128 3.872 17 C -0.126 4.126 18 C -0.050 4.050 19 C -0.167 4.167 20 C 0.019 3.981 21 C -0.183 4.183 22 O -0.357 6.357 23 Si 0.616 3.384 24 N -0.195 5.195 25 C -0.017 4.017 26 N -0.287 5.287 27 C -0.170 4.170 28 C -0.176 4.176 29 H 0.111 0.889 30 H 0.113 0.887 31 H 0.112 0.888 32 H 0.101 0.899 33 H 0.253 0.747 34 H 0.191 0.809 35 H 0.168 0.832 36 H 0.167 0.833 37 H 0.169 0.831 38 H 0.109 0.891 39 H 0.242 0.758 40 H -0.187 1.187 41 H -0.170 1.170 42 H 0.184 0.816 43 H 0.094 0.906 44 H 0.109 0.891 45 H 0.110 0.890 46 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 19.689 21.788 20.704 35.931 hybrid contribution 0.688 0.793 0.122 1.057 sum 20.377 22.581 20.826 36.863 Atomic orbital electron populations 1.42647 1.21156 1.20697 1.18853 0.73464 0.73414 0.73760 1.23592 0.99771 0.97420 0.87222 0.83921 1.22005 1.02679 0.90832 1.01917 1.21780 0.94837 1.02940 0.97194 1.20905 0.92262 0.91947 0.89440 0.88396 1.43908 1.13856 1.59178 1.16840 1.19071 0.87191 0.87572 0.84997 1.67829 1.08079 1.26551 1.27254 1.22902 0.89454 0.87000 0.97409 1.22592 1.03959 1.07983 0.95318 1.19529 0.87471 0.88463 0.91751 1.19399 0.96694 1.03031 0.93471 1.21825 0.99460 0.93072 0.90689 1.21933 0.96668 0.97945 1.00177 1.20806 0.91456 0.93001 0.92817 1.24575 0.95904 1.04678 0.93117 1.86337 1.32475 1.74098 1.42768 0.95581 0.78924 0.78003 0.85887 1.67018 1.35534 1.17380 0.99584 1.22841 0.92364 0.90880 0.95652 1.67721 1.16810 1.15885 1.28237 1.21961 1.03508 0.95349 0.96202 1.22032 0.89164 1.03963 1.02458 0.88917 0.88665 0.88829 0.89929 0.74665 0.80900 0.83185 0.83332 0.83113 0.89112 0.75813 1.18691 1.16961 0.81645 0.90611 0.89104 0.88972 0.89015 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 23.88 4.15 -4.67 -0.02 23.86 16 2 H 0.44 -17.10 8.96 -39.29 -0.35 -17.46 16 3 H 0.44 -17.04 8.96 -39.29 -0.35 -17.39 16 4 H 0.43 -16.69 8.90 -39.29 -0.35 -17.04 16 5 C 0.02 -0.75 3.02 -67.72 -0.20 -0.95 16 6 H 0.14 -4.50 8.14 -51.93 -0.42 -4.92 16 7 C -0.14 3.77 5.43 -26.72 -0.15 3.63 16 8 C -0.13 2.88 5.39 -26.73 -0.14 2.73 16 9 C 0.16 -3.05 2.45 -67.93 -0.17 -3.22 16 10 H 0.10 -1.72 7.50 -51.93 -0.39 -2.11 16 11 N -0.70 9.99 5.22 -55.82 -0.29 9.70 16 12 C 0.57 -5.70 8.40 -322.92 -2.71 -8.41 16 13 N -0.57 6.03 9.19 -14.00 -0.13 5.90 16 14 C 0.20 -2.12 11.29 -17.28 -0.20 -2.32 16 15 C -0.27 2.60 9.54 -38.98 -0.37 2.23 16 16 C 0.27 -2.03 6.77 -82.61 -0.56 -2.59 16 17 C -0.12 0.78 5.89 -104.75 -0.62 0.16 16 18 C -0.02 0.15 9.71 -38.93 -0.38 -0.23 16 19 C -0.15 0.79 9.37 -39.49 -0.37 0.42 16 20 C 0.15 -0.64 6.10 -82.54 -0.50 -1.15 16 21 C -0.07 0.46 2.98 36.01 0.11 0.56 16 22 O -0.55 3.81 11.82 -35.23 -0.42 3.40 16 23 Si 0.72 -4.25 31.88 -169.99 -5.42 -9.67 16 24 N -0.48 1.72 8.36 -9.19 -0.08 1.65 16 25 C 0.14 -0.84 10.61 -17.18 -0.18 -1.02 16 26 N -0.56 4.37 9.69 -10.46 -0.10 4.27 16 27 C -0.13 2.71 5.50 -26.76 -0.15 2.56 16 28 C -0.14 3.71 5.43 -26.76 -0.15 3.56 16 29 H 0.09 -2.57 8.14 -51.93 -0.42 -2.99 16 30 H 0.09 -2.72 8.14 -51.93 -0.42 -3.14 16 31 H 0.09 -1.87 8.14 -51.93 -0.42 -2.29 16 32 H 0.08 -1.84 8.14 -51.93 -0.42 -2.27 16 33 H 0.42 -6.12 8.72 -40.82 -0.36 -6.47 16 34 H 0.17 -2.39 8.06 -52.48 -0.42 -2.81 16 35 H 0.15 -1.72 6.35 -52.49 -0.33 -2.05 16 36 H 0.15 -1.13 7.67 -52.49 -0.40 -1.53 16 37 H 0.15 -0.95 7.47 -52.49 -0.39 -1.34 16 38 H 0.09 -0.73 7.96 -51.93 -0.41 -1.14 16 39 H 0.39 -4.59 8.74 45.56 0.40 -4.19 16 40 H -0.26 0.50 7.11 56.52 0.40 0.90 16 41 H -0.25 0.69 7.11 56.52 0.40 1.09 16 42 H 0.17 -1.47 6.29 -52.49 -0.33 -1.80 16 43 H 0.08 -1.54 8.14 -51.93 -0.42 -1.96 16 44 H 0.09 -1.53 8.14 -51.93 -0.42 -1.95 16 45 H 0.09 -2.48 8.14 -51.93 -0.42 -2.90 16 46 H 0.09 -2.52 8.14 -51.93 -0.42 -2.94 16 LS Contribution 371.25 15.07 5.59 5.59 Total: 1.00 -43.77 371.25 -14.29 -58.06 By element: Atomic # 1 Polarization: -92.02 SS G_CDS: -6.70 Total: -98.72 kcal Atomic # 6 Polarization: 2.71 SS G_CDS: -6.74 Total: -4.03 kcal Atomic # 7 Polarization: 45.99 SS G_CDS: -0.62 Total: 45.37 kcal Atomic # 8 Polarization: 3.81 SS G_CDS: -0.42 Total: 3.40 kcal Atomic # 14 Polarization: -4.25 SS G_CDS: -5.42 Total: -9.67 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -43.77 -14.29 -58.06 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081524_17085550.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 233.048 kcal (2) G-P(sol) polarization free energy of solvation -43.766 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 189.282 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.291 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -58.058 kcal (6) G-S(sol) free energy of system = (1) + (5) 174.991 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.00 seconds