Wall clock time and date at job start Mon Mar 8 2021 07:04:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00903 * 1 3 3 H 1.00896 * 109.46820 * 1 2 4 4 H 1.00897 * 109.47071 * 240.00014 * 1 2 3 5 5 C 1.46891 * 109.47333 * 119.99842 * 1 2 3 6 6 H 1.09000 * 109.47257 * 300.00233 * 5 1 2 7 7 C 1.53007 * 109.46924 * 60.00282 * 5 1 2 8 8 C 1.53006 * 109.46776 * 179.97438 * 7 5 1 9 9 C 1.52998 * 109.47281 * 299.99637 * 8 7 5 10 10 H 1.09000 * 109.47254 * 300.00406 * 9 8 7 11 11 N 1.46497 * 109.46807 * 179.97438 * 9 8 7 12 12 C 1.38417 * 119.99527 * 154.99987 * 11 9 8 13 13 N 1.32505 * 119.15593 * 0.02562 * 12 11 9 14 14 C 1.32374 * 120.97973 * 180.02562 * 13 12 11 15 15 C 1.38336 * 119.28853 * 359.97438 * 14 13 12 16 16 C 1.39748 * 118.44458 * 0.02562 * 15 14 13 17 17 C 1.48311 * 120.50657 * 180.02562 * 16 15 14 18 18 C 1.39776 * 120.54571 * 180.02562 * 17 16 15 19 19 C 1.38440 * 118.31133 * 179.97438 * 18 17 16 20 20 C 1.38280 * 119.28559 * 0.02562 * 19 18 17 21 21 C 1.50701 * 119.47811 * 179.97438 * 20 19 18 22 22 O 1.42896 * 109.47417 * 29.99709 * 21 20 19 23 23 Si 1.86301 * 109.47149 * 149.99725 * 21 20 19 24 24 N 1.31926 * 121.04174 * 0.26603 * 20 19 18 25 25 C 1.31712 * 121.85522 * 359.44493 * 24 20 19 26 26 N 1.32380 * 119.15214 * 180.29991 * 12 11 9 27 27 C 1.52995 * 109.46626 * 60.00527 * 9 8 7 28 28 C 1.52992 * 109.47466 * 180.02562 * 5 1 2 29 29 H 1.09000 * 109.47194 * 59.99911 * 7 5 1 30 30 H 1.09005 * 109.47159 * 299.99561 * 7 5 1 31 31 H 1.09006 * 109.46355 * 179.97438 * 8 7 5 32 32 H 1.09000 * 109.47308 * 60.00010 * 8 7 5 33 33 H 0.96996 * 120.00867 * 335.00478 * 11 9 8 34 34 H 1.08004 * 120.35677 * 180.02562 * 14 13 12 35 35 H 1.07999 * 120.77352 * 179.97438 * 15 14 13 36 36 H 1.07998 * 120.83885 * 359.96141 * 18 17 16 37 37 H 1.07999 * 120.35515 * 180.02562 * 19 18 17 38 38 H 1.09002 * 109.47060 * 269.99736 * 21 20 19 39 39 H 0.96699 * 114.00604 * 179.97438 * 22 21 20 40 40 H 1.48498 * 110.00005 * 299.99971 * 23 21 20 41 41 H 1.48501 * 110.00049 * 61.31633 * 23 21 20 42 42 H 1.07998 * 119.70608 * 180.28765 * 25 24 20 43 43 H 1.09000 * 109.47403 * 59.99970 * 27 9 8 44 44 H 1.09005 * 109.46866 * 180.02562 * 27 9 8 45 45 H 1.09000 * 109.47042 * 300.00328 * 28 5 1 46 46 H 1.08998 * 109.47399 * 59.99974 * 28 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3363 0.9513 0.0000 4 1 -0.3363 -0.4756 0.8238 5 6 -0.4897 -0.6924 -1.1994 6 1 -0.1264 -0.1786 -2.0894 7 6 0.0203 -2.1350 -1.1993 8 6 -0.4903 -2.8564 -2.4483 9 6 -2.0203 -2.8564 -2.4476 10 1 -2.3833 -3.3700 -1.5574 11 7 -2.5091 -3.5466 -3.6438 12 6 -3.7641 -4.1305 -3.6416 13 7 -4.5094 -4.0547 -2.5487 14 6 -5.7146 -4.6005 -2.5066 15 6 -6.1989 -5.2584 -3.6230 16 6 -5.3903 -5.3222 -4.7610 17 6 -5.8642 -6.0156 -5.9834 18 6 -5.0559 -6.0803 -7.1219 19 6 -5.5441 -6.7395 -8.2371 20 6 -6.8041 -7.3070 -8.1897 21 6 -7.3401 -8.0251 -9.4014 22 8 -6.2548 -8.5926 -10.1376 23 14 -8.4980 -9.3800 -8.8587 24 7 -7.5468 -7.2248 -7.1025 25 6 -7.1231 -6.6130 -6.0158 26 7 -4.1867 -4.7551 -4.7296 27 6 -2.5302 -1.4139 -2.4477 28 6 -2.0196 -0.6919 -1.1997 29 1 -0.3431 -2.6488 -0.3094 30 1 1.1103 -2.1350 -1.1994 31 1 -0.1266 -3.8840 -2.4485 32 1 -0.1274 -2.3427 -3.3385 33 1 -1.9534 -3.5945 -4.4374 34 1 -6.3138 -4.5323 -1.6106 35 1 -7.1786 -5.7128 -3.6150 36 1 -4.0755 -5.6274 -7.1313 37 1 -4.9472 -6.8097 -9.1344 38 1 -7.8782 -7.3190 -10.0338 39 1 -6.5265 -9.0716 -10.9325 40 1 -7.7764 -10.3494 -7.9958 41 1 -9.6477 -8.7996 -8.1193 42 1 -7.7583 -6.5704 -5.1434 43 1 -2.1672 -0.9002 -3.3379 44 1 -3.6202 -1.4138 -2.4467 45 1 -2.3833 -1.2054 -0.3097 46 1 -2.3826 0.3359 -1.1999 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_273584_18081524_17085550.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:04:36 Heat of formation + Delta-G solvation = 141.939727 kcal Electronic energy + Delta-G solvation = -27195.947958 eV Core-core repulsion = 23397.479645 eV Total energy + Delta-G solvation = -3798.468313 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.172 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.29014 -41.43189 -40.97984 -38.21517 -37.78790 -35.67581 -35.10890 -33.49797 -33.12572 -32.04421 -31.37599 -28.94419 -28.01593 -25.50446 -25.15105 -24.21136 -23.87568 -23.18042 -22.39081 -21.42790 -19.43630 -18.89609 -18.61445 -18.39005 -18.30040 -17.92095 -17.48103 -17.08932 -16.62725 -16.50858 -16.42313 -16.29555 -16.06574 -15.32503 -15.22689 -14.98205 -14.89650 -14.76451 -14.44364 -14.19400 -14.04990 -13.77560 -13.44440 -13.41075 -12.84769 -12.72410 -12.62325 -12.34781 -12.27347 -12.20646 -11.99575 -11.98532 -11.53616 -11.30370 -11.01794 -10.93233 -10.57921 -10.32298 -9.85903 -9.16397 -4.94780 -0.90918 0.00285 0.12677 0.46439 1.30408 1.52038 1.69660 1.76899 2.11115 2.41005 2.61606 2.86298 2.89737 3.09243 3.23109 3.28276 3.46209 3.51784 3.61018 3.62467 3.72555 3.76996 3.88604 3.92799 4.03882 4.06967 4.10582 4.11454 4.20246 4.26488 4.34113 4.40980 4.48181 4.55948 4.60286 4.61928 4.64757 4.70953 4.84460 4.85994 4.91057 4.96444 5.04255 5.06652 5.11447 5.23373 5.33325 5.37129 5.74964 6.03482 6.28924 6.55059 6.81442 7.19037 Molecular weight = 329.17amu Principal moments of inertia in cm(-1) A = 0.031574 B = 0.002206 C = 0.002110 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 886.595035 B =12689.533313 C =13269.197581 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.617 5.617 2 H 0.451 0.549 3 H 0.450 0.550 4 H 0.443 0.557 5 C 0.052 3.948 6 H 0.153 0.847 7 C -0.134 4.134 8 C -0.128 4.128 9 C 0.154 3.846 10 H 0.082 0.918 11 N -0.695 5.695 12 C 0.554 3.446 13 N -0.572 5.572 14 C 0.197 3.803 15 C -0.282 4.282 16 C 0.250 3.750 17 C -0.120 4.120 18 C -0.030 4.030 19 C -0.152 4.152 20 C 0.126 3.874 21 C -0.070 4.070 22 O -0.561 6.561 23 Si 0.804 3.196 24 N -0.513 5.513 25 C 0.133 3.867 26 N -0.590 5.590 27 C -0.129 4.129 28 C -0.135 4.135 29 H 0.096 0.904 30 H 0.115 0.885 31 H 0.065 0.935 32 H 0.084 0.916 33 H 0.415 0.585 34 H 0.204 0.796 35 H 0.166 0.834 36 H 0.156 0.844 37 H 0.158 0.842 38 H 0.113 0.887 39 H 0.413 0.587 40 H -0.320 1.320 41 H -0.290 1.290 42 H 0.189 0.811 43 H 0.070 0.930 44 H 0.046 0.954 45 H 0.095 0.905 46 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 21.594 24.318 21.422 38.943 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.019 5.019 2 H 0.283 0.717 3 H 0.282 0.718 4 H 0.273 0.727 5 C -0.054 4.054 6 H 0.170 0.830 7 C -0.172 4.172 8 C -0.166 4.166 9 C 0.049 3.951 10 H 0.100 0.900 11 N -0.332 5.332 12 C 0.197 3.803 13 N -0.295 5.295 14 C 0.030 3.970 15 C -0.307 4.307 16 C 0.104 3.896 17 C -0.123 4.123 18 C -0.057 4.057 19 C -0.172 4.172 20 C -0.009 4.009 21 C -0.180 4.180 22 O -0.371 6.371 23 Si 0.711 3.289 24 N -0.225 5.225 25 C -0.026 4.026 26 N -0.313 5.313 27 C -0.169 4.169 28 C -0.173 4.173 29 H 0.114 0.886 30 H 0.133 0.867 31 H 0.084 0.916 32 H 0.103 0.897 33 H 0.252 0.748 34 H 0.221 0.779 35 H 0.183 0.817 36 H 0.174 0.826 37 H 0.176 0.824 38 H 0.130 0.870 39 H 0.265 0.735 40 H -0.250 1.250 41 H -0.217 1.217 42 H 0.205 0.795 43 H 0.089 0.911 44 H 0.065 0.935 45 H 0.113 0.887 46 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges 21.675 24.219 22.475 39.515 hybrid contribution 0.141 0.059 -0.299 0.336 sum 21.816 24.277 22.176 39.460 Atomic orbital electron populations 1.42222 1.22111 1.20903 1.16651 0.71721 0.71841 0.72657 1.22836 0.96319 0.96009 0.90207 0.82955 1.21948 1.03762 0.92575 0.98915 1.21742 0.91987 1.02409 1.00497 1.21263 0.94610 0.92366 0.86826 0.90014 1.44365 1.12307 1.58240 1.18319 1.19535 0.88522 0.87581 0.84699 1.67948 1.08263 1.26422 1.26913 1.23484 0.89520 0.85935 0.98055 1.22803 1.04480 1.08425 0.95037 1.19587 0.88373 0.89546 0.92064 1.19567 0.96442 1.02388 0.93951 1.21983 0.99877 0.93061 0.90747 1.22035 0.96490 0.98023 1.00650 1.21214 0.92159 0.94028 0.93514 1.24551 0.95800 1.04542 0.93095 1.86304 1.32504 1.74448 1.43866 0.94863 0.75383 0.74863 0.83812 1.67041 1.36448 1.18517 1.00453 1.23221 0.92975 0.90596 0.95855 1.67699 1.17120 1.17016 1.29483 1.21831 1.00842 0.94724 0.99488 1.21915 0.92572 1.03688 0.99104 0.88563 0.86681 0.91593 0.89732 0.74782 0.77892 0.81659 0.82595 0.82427 0.86992 0.73456 1.24950 1.21723 0.79477 0.91106 0.93509 0.88683 0.87663 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.62 47.39 4.15 -168.69 -0.70 46.69 16 2 H 0.45 -36.37 8.96 -89.69 -0.80 -37.17 16 3 H 0.45 -36.03 8.96 -89.70 -0.80 -36.84 16 4 H 0.44 -34.91 8.90 -89.70 -0.80 -35.71 16 5 C 0.05 -3.33 3.02 44.92 0.14 -3.19 16 6 H 0.15 -9.83 8.14 -2.39 -0.02 -9.85 16 7 C -0.13 7.44 5.43 30.60 0.17 7.61 16 8 C -0.13 5.44 5.39 30.60 0.16 5.60 16 9 C 0.15 -5.39 2.45 44.99 0.11 -5.28 16 10 H 0.08 -2.61 7.50 -2.39 -0.02 -2.63 16 11 N -0.70 17.31 5.22 -330.52 -1.73 15.58 16 12 C 0.55 -9.15 8.40 261.53 2.20 -6.95 16 13 N -0.57 10.38 9.19 -198.19 -1.82 8.56 16 14 C 0.20 -3.82 11.29 84.63 0.96 -2.87 16 15 C -0.28 4.68 9.54 22.66 0.22 4.89 16 16 C 0.25 -2.90 6.77 42.00 0.28 -2.62 16 17 C -0.12 1.14 5.89 -19.95 -0.12 1.02 16 18 C -0.03 0.28 9.71 22.69 0.22 0.50 16 19 C -0.15 1.21 9.37 22.33 0.21 1.42 16 20 C 0.13 -0.71 6.10 42.55 0.26 -0.45 16 21 C -0.07 0.76 2.98 71.24 0.21 0.97 16 22 O -0.56 7.18 11.82 -148.98 -1.76 5.42 16 23 Si 0.80 -7.51 31.88 68.60 2.19 -5.32 16 24 N -0.51 2.06 8.36 -182.97 -1.53 0.53 16 25 C 0.13 -1.16 10.61 84.99 0.90 -0.26 16 26 N -0.59 6.99 9.69 -187.02 -1.81 5.18 16 27 C -0.13 5.04 5.50 30.58 0.17 5.21 16 28 C -0.13 7.19 5.43 30.58 0.17 7.36 16 29 H 0.10 -5.35 8.14 -2.39 -0.02 -5.37 16 30 H 0.11 -6.73 8.14 -2.38 -0.02 -6.75 16 31 H 0.07 -2.42 8.14 -2.38 -0.02 -2.44 16 32 H 0.08 -3.62 8.14 -2.39 -0.02 -3.64 16 33 H 0.41 -10.62 8.72 -92.71 -0.81 -11.42 16 34 H 0.20 -5.45 8.06 -2.91 -0.02 -5.47 16 35 H 0.17 -3.48 6.35 -2.91 -0.02 -3.50 16 36 H 0.16 -1.84 7.67 -2.91 -0.02 -1.86 16 37 H 0.16 -1.63 7.47 -2.91 -0.02 -1.65 16 38 H 0.11 -1.72 7.96 -2.39 -0.02 -1.74 16 39 H 0.41 -9.51 8.74 -74.06 -0.65 -10.16 16 40 H -0.32 -0.10 7.11 99.48 0.71 0.61 16 41 H -0.29 0.65 7.11 99.48 0.71 1.36 16 42 H 0.19 -2.85 6.29 -2.91 -0.02 -2.87 16 43 H 0.07 -2.70 8.14 -2.39 -0.02 -2.72 16 44 H 0.05 -1.38 8.14 -2.38 -0.02 -1.40 16 45 H 0.09 -5.08 8.14 -2.39 -0.02 -5.10 16 46 H 0.10 -5.82 8.14 -2.39 -0.02 -5.84 16 Total: 1.00 -98.89 371.25 -3.68 -102.57 By element: Atomic # 1 Polarization: -189.41 SS G_CDS: -2.76 Total: -192.17 kcal Atomic # 6 Polarization: 6.71 SS G_CDS: 6.25 Total: 12.96 kcal Atomic # 7 Polarization: 84.13 SS G_CDS: -7.59 Total: 76.54 kcal Atomic # 8 Polarization: 7.18 SS G_CDS: -1.76 Total: 5.42 kcal Atomic # 14 Polarization: -7.51 SS G_CDS: 2.19 Total: -5.32 kcal Total: -98.89 -3.68 -102.57 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081524_17085550.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 244.506 kcal (2) G-P(sol) polarization free energy of solvation -98.890 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 145.616 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.676 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -102.566 kcal (6) G-S(sol) free energy of system = (1) + (5) 141.940 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds