Wall clock time and date at job start Mon Mar 8 2021 07:36:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00901 * 1 3 3 H 1.00906 * 109.47114 * 1 2 4 4 H 1.00902 * 109.47309 * 240.00643 * 1 2 3 5 5 C 1.46901 * 109.47628 * 120.00217 * 1 2 3 6 6 H 1.09001 * 109.46874 * 300.00124 * 5 1 2 7 7 C 1.53000 * 109.46769 * 59.99844 * 5 1 2 8 8 C 1.52997 * 109.47060 * 180.02562 * 7 5 1 9 9 C 1.53006 * 109.47127 * 300.00449 * 8 7 5 10 10 H 1.09001 * 109.47002 * 299.99574 * 9 8 7 11 11 N 1.46504 * 109.46883 * 180.02562 * 9 8 7 12 12 C 1.34773 * 120.00111 * 84.99828 * 11 9 8 13 13 O 1.21534 * 120.00118 * 0.02562 * 12 11 9 14 14 C 1.48009 * 119.99719 * 179.97438 * 12 11 9 15 15 N 1.32840 * 120.07309 * 359.73319 * 14 12 11 16 16 N 1.28364 * 122.13956 * 179.68907 * 15 14 12 17 17 C 1.33016 * 122.14041 * 0.59629 * 16 15 14 18 18 C 1.48210 * 120.07551 * 179.68372 * 17 16 15 19 19 C 1.39830 * 120.54621 * 4.74240 * 18 17 16 20 20 C 1.38430 * 118.30460 * 179.73284 * 19 18 17 21 21 C 1.38291 * 119.29265 * 0.56314 * 20 19 18 22 22 C 1.50690 * 119.47441 * 179.67897 * 21 20 19 23 23 O 1.42901 * 109.47505 * 30.01345 * 22 21 20 24 24 Si 1.86297 * 109.47370 * 150.02063 * 22 21 20 25 25 N 1.31932 * 121.04518 * 359.69344 * 21 20 19 26 26 C 1.31689 * 121.86789 * 0.02562 * 25 21 20 27 27 C 1.39740 * 119.85289 * 359.69816 * 17 16 15 28 28 C 1.38491 * 118.00366 * 0.02562 * 27 17 16 29 29 C 1.52997 * 109.47164 * 59.99836 * 9 8 7 30 30 C 1.52996 * 109.47195 * 179.97438 * 5 1 2 31 31 H 1.09002 * 109.47398 * 300.00295 * 7 5 1 32 32 H 1.09001 * 109.47194 * 60.00475 * 7 5 1 33 33 H 1.08998 * 109.47533 * 59.99948 * 8 7 5 34 34 H 1.08996 * 109.47853 * 180.02562 * 8 7 5 35 35 H 0.97003 * 119.99624 * 264.99510 * 11 9 8 36 36 H 1.08001 * 120.84489 * 359.97438 * 19 18 17 37 37 H 1.07994 * 120.35277 * 180.25488 * 20 19 18 38 38 H 1.09001 * 109.47250 * 270.01670 * 22 21 20 39 39 H 0.96706 * 113.99454 * 60.00794 * 23 22 21 40 40 H 1.48501 * 110.00305 * 58.67484 * 24 22 21 41 41 H 1.48494 * 110.00454 * 179.97438 * 24 22 21 42 42 H 1.08000 * 119.71256 * 179.97438 * 26 25 21 43 43 H 1.08006 * 120.99895 * 180.02562 * 27 17 16 44 44 H 1.08003 * 120.99654 * 180.02562 * 28 27 17 45 45 H 1.09002 * 109.47045 * 180.02562 * 29 9 8 46 46 H 1.09001 * 109.47375 * 59.99966 * 29 9 8 47 47 H 1.08992 * 109.47554 * 299.99900 * 30 5 1 48 48 H 1.09004 * 109.47108 * 60.00150 * 30 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9514 0.0000 4 1 -0.3364 -0.4756 0.8239 5 6 -0.4898 -0.6925 -1.1994 6 1 -0.1265 -0.1787 -2.0894 7 6 0.0202 -2.1350 -1.1993 8 6 -0.4893 -2.8562 -2.4488 9 6 -2.0194 -2.8561 -2.4493 10 1 -2.3831 -3.3700 -1.5595 11 7 -2.5073 -3.5471 -3.6455 12 6 -2.6360 -4.8887 -3.6432 13 8 -2.3478 -5.5252 -2.6488 14 6 -3.1294 -5.5868 -4.8515 15 7 -3.4508 -4.8919 -5.9371 16 7 -3.8769 -5.4568 -7.0081 17 6 -4.0360 -6.7743 -7.0981 18 6 -4.5379 -7.3778 -8.3553 19 6 -4.7547 -6.5854 -9.4869 20 6 -5.2188 -7.1982 -10.6381 21 6 -5.4624 -8.5594 -10.6290 22 6 -5.9746 -9.2294 -11.8778 23 8 -5.4911 -8.5300 -13.0263 24 14 -5.3759 -10.9928 -11.9267 25 7 -5.2535 -9.2807 -9.5442 26 6 -4.8076 -8.7438 -8.4275 27 6 -3.7290 -7.5883 -6.0045 28 6 -3.2640 -6.9793 -4.8509 29 6 -2.5293 -1.4136 -2.4494 30 6 -2.0198 -0.6930 -1.1990 31 1 1.1102 -2.1351 -1.1993 32 1 -0.3431 -2.6488 -0.3093 33 1 -0.1257 -2.3423 -3.3386 34 1 -0.1265 -3.8839 -2.4486 35 1 -2.7377 -3.0391 -4.4390 36 1 -4.5611 -5.5231 -9.4644 37 1 -5.3937 -6.6185 -11.5323 38 1 -7.0646 -9.2158 -11.8764 39 1 -4.5267 -8.5022 -13.0926 40 1 -5.8455 -11.7225 -10.7216 41 1 -5.8748 -11.6648 -13.1533 42 1 -4.6493 -9.3671 -7.5598 43 1 -3.8508 -8.6602 -6.0573 44 1 -3.0118 -7.5620 -3.9772 45 1 -3.6193 -1.4135 -2.4494 46 1 -2.1656 -0.8996 -3.3392 47 1 -2.3827 -1.2070 -0.3090 48 1 -2.3834 0.3346 -1.1988 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081524_17088014.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:36:58 Heat of formation + Delta-G solvation = 139.957642 kcal Electronic energy + Delta-G solvation = -30280.248877 eV Core-core repulsion = 26034.786282 eV Total energy + Delta-G solvation = -4245.462595 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.171 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -43.61656 -43.24188 -42.13435 -41.50907 -39.30549 -38.52883 -36.38765 -35.82215 -35.25292 -34.00641 -33.92560 -32.77069 -31.27035 -28.73193 -27.57183 -26.27318 -26.12945 -25.49746 -24.97964 -23.66486 -23.44336 -23.08155 -21.49404 -21.22135 -20.46543 -19.92194 -19.61908 -19.48020 -18.97498 -18.54342 -17.96892 -17.79724 -17.49530 -17.36271 -17.25741 -16.92612 -16.74457 -16.41928 -16.24271 -16.13883 -15.95656 -15.62346 -15.35492 -15.32842 -15.23683 -14.90157 -14.79165 -14.63802 -14.54567 -14.22673 -14.18548 -13.57975 -13.50745 -13.29220 -13.13591 -12.69148 -12.41571 -12.33520 -12.31595 -11.91368 -11.56006 -11.52578 -11.45121 -10.99414 -10.37776 -5.40694 -1.98845 -1.26673 -1.22202 -0.67674 -0.50137 0.53483 0.58643 0.66200 0.71827 0.82267 0.83670 1.36292 1.45292 1.52500 1.57508 1.59293 1.66214 1.67126 1.94244 2.03080 2.05377 2.06958 2.18249 2.32147 2.33691 2.37651 2.39804 2.53997 2.63085 2.67570 2.72535 2.81450 2.82806 2.88499 2.91779 2.99864 3.13465 3.18339 3.26638 3.37877 3.44516 3.47630 3.58824 3.65775 3.84360 3.91182 3.93021 3.99112 4.05995 4.34174 4.36041 4.79595 5.11537 5.82674 5.84506 6.11869 6.47163 Molecular weight = 357.17amu Principal moments of inertia in cm(-1) A = 0.031606 B = 0.001633 C = 0.001585 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 885.684327 B =17144.591109 C =17660.351355 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.437 0.563 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.139 4.139 8 C -0.132 4.132 9 C 0.139 3.861 10 H 0.098 0.902 11 N -0.711 5.711 12 C 0.587 3.413 13 O -0.520 6.520 14 C 0.006 3.994 15 N -0.201 5.201 16 N -0.232 5.232 17 C 0.148 3.852 18 C -0.121 4.121 19 C -0.023 4.023 20 C -0.155 4.155 21 C 0.118 3.882 22 C -0.069 4.069 23 O -0.536 6.536 24 Si 0.719 3.281 25 N -0.476 5.476 26 C 0.141 3.859 27 C -0.114 4.114 28 C -0.053 4.053 29 C -0.128 4.128 30 C -0.138 4.138 31 H 0.093 0.907 32 H 0.092 0.908 33 H 0.080 0.920 34 H 0.092 0.908 35 H 0.416 0.584 36 H 0.152 0.848 37 H 0.152 0.848 38 H 0.129 0.871 39 H 0.381 0.619 40 H -0.247 1.247 41 H -0.259 1.259 42 H 0.165 0.835 43 H 0.166 0.834 44 H 0.168 0.832 45 H 0.095 0.905 46 H 0.085 0.915 47 H 0.093 0.907 48 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 17.509 26.613 27.390 42.012 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.266 0.734 4 H 0.263 0.737 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.177 4.177 8 C -0.171 4.171 9 C 0.034 3.966 10 H 0.116 0.884 11 N -0.363 5.363 12 C 0.371 3.629 13 O -0.394 6.394 14 C -0.140 4.140 15 N -0.049 5.049 16 N -0.077 5.077 17 C 0.007 3.993 18 C -0.125 4.125 19 C -0.049 4.049 20 C -0.175 4.175 21 C -0.019 4.019 22 C -0.179 4.179 23 O -0.340 6.340 24 Si 0.619 3.381 25 N -0.187 5.187 26 C -0.019 4.019 27 C -0.142 4.142 28 C -0.082 4.082 29 C -0.166 4.166 30 C -0.176 4.176 31 H 0.112 0.888 32 H 0.110 0.890 33 H 0.099 0.901 34 H 0.110 0.890 35 H 0.253 0.747 36 H 0.169 0.831 37 H 0.170 0.830 38 H 0.146 0.854 39 H 0.229 0.771 40 H -0.170 1.170 41 H -0.184 1.184 42 H 0.182 0.818 43 H 0.183 0.817 44 H 0.186 0.814 45 H 0.114 0.886 46 H 0.104 0.896 47 H 0.111 0.889 48 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 16.471 25.860 27.014 40.863 hybrid contribution -0.178 0.480 0.888 1.026 sum 16.293 26.340 27.903 41.687 Atomic orbital electron populations 1.42646 1.21243 1.20649 1.18830 0.73385 0.73429 0.73749 1.23590 0.99490 0.97615 0.87301 0.83813 1.22045 1.02742 0.90653 1.02276 1.21946 0.95577 1.02949 0.96658 1.21076 0.93214 0.92426 0.89840 0.88388 1.45763 1.66786 1.06641 1.17140 1.17509 0.77295 0.82189 0.85893 1.90854 1.49444 1.66085 1.33037 1.22618 1.02260 0.93418 0.95728 1.73144 1.04818 1.31506 0.95390 1.73323 1.09775 1.08993 1.15566 1.21333 0.92745 0.91603 0.93625 1.19261 1.05777 0.94986 0.92498 1.21856 0.91283 1.01101 0.90682 1.21965 1.00415 0.95246 0.99866 1.22031 0.93663 0.91690 0.94470 1.25127 1.02644 1.07999 0.82156 1.86545 1.27254 1.78272 1.41966 0.94149 0.90760 0.72912 0.80328 1.67302 1.12770 1.39365 0.99221 1.22880 0.92137 0.91038 0.95808 1.22495 0.96763 1.02963 0.92004 1.22399 0.92364 0.93972 0.99423 1.21782 1.03430 0.94059 0.97361 1.22029 0.89559 1.04106 1.01896 0.88798 0.88953 0.90097 0.88954 0.74661 0.83069 0.82985 0.85355 0.77084 1.17036 1.18388 0.81826 0.81682 0.81401 0.88624 0.89616 0.88891 0.88540 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.09 4.15 -4.67 -0.02 24.07 16 2 H 0.44 -17.19 8.96 -39.29 -0.35 -17.54 16 3 H 0.44 -17.26 8.96 -39.29 -0.35 -17.61 16 4 H 0.43 -16.81 8.90 -39.29 -0.35 -17.16 16 5 C 0.02 -0.76 3.02 -67.71 -0.20 -0.96 16 6 H 0.14 -4.61 8.14 -51.93 -0.42 -5.03 16 7 C -0.14 3.79 5.43 -26.73 -0.15 3.64 16 8 C -0.13 2.82 5.49 -26.73 -0.15 2.67 16 9 C 0.14 -2.72 2.45 -67.93 -0.17 -2.89 16 10 H 0.10 -1.77 7.57 -51.93 -0.39 -2.16 16 11 N -0.71 10.89 5.07 -54.69 -0.28 10.61 16 12 C 0.59 -6.63 7.77 -12.26 -0.10 -6.72 16 13 O -0.52 4.65 16.04 5.34 0.09 4.74 16 14 C 0.01 -0.06 6.83 -82.80 -0.57 -0.62 16 15 N -0.20 1.75 10.73 33.33 0.36 2.11 16 16 N -0.23 1.72 10.72 33.38 0.36 2.08 16 17 C 0.15 -1.26 6.81 -82.70 -0.56 -1.82 16 18 C -0.12 0.98 5.89 -104.76 -0.62 0.37 16 19 C -0.02 0.18 9.70 -38.92 -0.38 -0.19 16 20 C -0.16 1.19 9.37 -39.49 -0.37 0.82 16 21 C 0.12 -0.78 6.08 -82.53 -0.50 -1.28 16 22 C -0.07 0.45 2.98 36.00 0.11 0.56 16 23 O -0.54 3.68 11.84 -35.23 -0.42 3.26 16 24 Si 0.72 -4.43 31.87 -169.99 -5.42 -9.85 16 25 N -0.48 2.86 8.34 -9.18 -0.08 2.78 16 26 C 0.14 -1.14 10.60 -17.17 -0.18 -1.33 16 27 C -0.11 1.21 9.54 -38.93 -0.37 0.84 16 28 C -0.05 0.56 9.71 -38.87 -0.38 0.18 16 29 C -0.13 2.93 5.40 -26.71 -0.14 2.79 16 30 C -0.14 3.88 5.43 -26.71 -0.15 3.73 16 31 H 0.09 -2.62 8.14 -51.93 -0.42 -3.04 16 32 H 0.09 -2.51 8.14 -51.93 -0.42 -2.93 16 33 H 0.08 -1.73 8.14 -51.93 -0.42 -2.15 16 34 H 0.09 -1.62 8.14 -51.93 -0.42 -2.04 16 35 H 0.42 -6.56 7.95 -40.82 -0.32 -6.89 16 36 H 0.15 -1.34 7.65 -52.49 -0.40 -1.74 16 37 H 0.15 -1.31 7.47 -52.49 -0.39 -1.70 16 38 H 0.13 -0.79 7.96 -51.93 -0.41 -1.21 16 39 H 0.38 -4.13 8.70 45.56 0.40 -3.74 16 40 H -0.25 0.76 7.11 56.52 0.40 1.16 16 41 H -0.26 0.75 7.11 56.52 0.40 1.16 16 42 H 0.16 -1.83 6.28 -52.49 -0.33 -2.16 16 43 H 0.17 -2.23 6.34 -52.48 -0.33 -2.56 16 44 H 0.17 -2.00 7.71 -52.48 -0.40 -2.40 16 45 H 0.10 -1.99 8.14 -51.93 -0.42 -2.41 16 46 H 0.09 -1.98 8.14 -51.93 -0.42 -2.40 16 47 H 0.09 -2.62 8.14 -51.93 -0.42 -3.04 16 48 H 0.10 -2.80 8.14 -51.93 -0.42 -3.22 16 LS Contribution 393.25 15.07 5.93 5.93 Total: 1.00 -44.30 393.25 -11.00 -55.30 By element: Atomic # 1 Polarization: -94.16 SS G_CDS: -6.65 Total: -100.81 kcal Atomic # 6 Polarization: 4.65 SS G_CDS: -4.87 Total: -0.21 kcal Atomic # 7 Polarization: 41.31 SS G_CDS: 0.34 Total: 41.65 kcal Atomic # 8 Polarization: 8.33 SS G_CDS: -0.33 Total: 8.00 kcal Atomic # 14 Polarization: -4.43 SS G_CDS: -5.42 Total: -9.85 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -44.30 -11.00 -55.30 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081524_17088014.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 195.255 kcal (2) G-P(sol) polarization free energy of solvation -44.298 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 150.957 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.000 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -55.297 kcal (6) G-S(sol) free energy of system = (1) + (5) 139.958 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds