Wall clock time and date at job start Mon Mar 8 2021 07:36:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00901 * 1 3 3 H 1.00906 * 109.47114 * 1 2 4 4 H 1.00902 * 109.47309 * 240.00643 * 1 2 3 5 5 C 1.46901 * 109.47628 * 120.00217 * 1 2 3 6 6 H 1.09001 * 109.46874 * 300.00124 * 5 1 2 7 7 C 1.53000 * 109.46769 * 59.99844 * 5 1 2 8 8 C 1.52997 * 109.47060 * 180.02562 * 7 5 1 9 9 C 1.53006 * 109.47127 * 300.00449 * 8 7 5 10 10 H 1.09001 * 109.47002 * 299.99574 * 9 8 7 11 11 N 1.46504 * 109.46883 * 180.02562 * 9 8 7 12 12 C 1.34773 * 120.00111 * 84.99828 * 11 9 8 13 13 O 1.21534 * 120.00118 * 0.02562 * 12 11 9 14 14 C 1.48009 * 119.99719 * 179.97438 * 12 11 9 15 15 N 1.32840 * 120.07309 * 359.73319 * 14 12 11 16 16 N 1.28364 * 122.13956 * 179.68907 * 15 14 12 17 17 C 1.33016 * 122.14041 * 0.59629 * 16 15 14 18 18 C 1.48210 * 120.07551 * 179.68372 * 17 16 15 19 19 C 1.39830 * 120.54621 * 4.74240 * 18 17 16 20 20 C 1.38430 * 118.30460 * 179.73284 * 19 18 17 21 21 C 1.38291 * 119.29265 * 0.56314 * 20 19 18 22 22 C 1.50690 * 119.47441 * 179.67897 * 21 20 19 23 23 O 1.42901 * 109.47505 * 30.01345 * 22 21 20 24 24 Si 1.86297 * 109.47370 * 150.02063 * 22 21 20 25 25 N 1.31932 * 121.04518 * 359.69344 * 21 20 19 26 26 C 1.31689 * 121.86789 * 0.02562 * 25 21 20 27 27 C 1.39740 * 119.85289 * 359.69816 * 17 16 15 28 28 C 1.38491 * 118.00366 * 0.02562 * 27 17 16 29 29 C 1.52997 * 109.47164 * 59.99836 * 9 8 7 30 30 C 1.52996 * 109.47195 * 179.97438 * 5 1 2 31 31 H 1.09002 * 109.47398 * 300.00295 * 7 5 1 32 32 H 1.09001 * 109.47194 * 60.00475 * 7 5 1 33 33 H 1.08998 * 109.47533 * 59.99948 * 8 7 5 34 34 H 1.08996 * 109.47853 * 180.02562 * 8 7 5 35 35 H 0.97003 * 119.99624 * 264.99510 * 11 9 8 36 36 H 1.08001 * 120.84489 * 359.97438 * 19 18 17 37 37 H 1.07994 * 120.35277 * 180.25488 * 20 19 18 38 38 H 1.09001 * 109.47250 * 270.01670 * 22 21 20 39 39 H 0.96706 * 113.99454 * 60.00794 * 23 22 21 40 40 H 1.48501 * 110.00305 * 58.67484 * 24 22 21 41 41 H 1.48494 * 110.00454 * 179.97438 * 24 22 21 42 42 H 1.08000 * 119.71256 * 179.97438 * 26 25 21 43 43 H 1.08006 * 120.99895 * 180.02562 * 27 17 16 44 44 H 1.08003 * 120.99654 * 180.02562 * 28 27 17 45 45 H 1.09002 * 109.47045 * 180.02562 * 29 9 8 46 46 H 1.09001 * 109.47375 * 59.99966 * 29 9 8 47 47 H 1.08992 * 109.47554 * 299.99900 * 30 5 1 48 48 H 1.09004 * 109.47108 * 60.00150 * 30 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9514 0.0000 4 1 -0.3364 -0.4756 0.8239 5 6 -0.4898 -0.6925 -1.1994 6 1 -0.1265 -0.1787 -2.0894 7 6 0.0202 -2.1350 -1.1993 8 6 -0.4893 -2.8562 -2.4488 9 6 -2.0194 -2.8561 -2.4493 10 1 -2.3831 -3.3700 -1.5595 11 7 -2.5073 -3.5471 -3.6455 12 6 -2.6360 -4.8887 -3.6432 13 8 -2.3478 -5.5252 -2.6488 14 6 -3.1294 -5.5868 -4.8515 15 7 -3.4508 -4.8919 -5.9371 16 7 -3.8769 -5.4568 -7.0081 17 6 -4.0360 -6.7743 -7.0981 18 6 -4.5379 -7.3778 -8.3553 19 6 -4.7547 -6.5854 -9.4869 20 6 -5.2188 -7.1982 -10.6381 21 6 -5.4624 -8.5594 -10.6290 22 6 -5.9746 -9.2294 -11.8778 23 8 -5.4911 -8.5300 -13.0263 24 14 -5.3759 -10.9928 -11.9267 25 7 -5.2535 -9.2807 -9.5442 26 6 -4.8076 -8.7438 -8.4275 27 6 -3.7290 -7.5883 -6.0045 28 6 -3.2640 -6.9793 -4.8509 29 6 -2.5293 -1.4136 -2.4494 30 6 -2.0198 -0.6930 -1.1990 31 1 1.1102 -2.1351 -1.1993 32 1 -0.3431 -2.6488 -0.3093 33 1 -0.1257 -2.3423 -3.3386 34 1 -0.1265 -3.8839 -2.4486 35 1 -2.7377 -3.0391 -4.4390 36 1 -4.5611 -5.5231 -9.4644 37 1 -5.3937 -6.6185 -11.5323 38 1 -7.0646 -9.2158 -11.8764 39 1 -4.5267 -8.5022 -13.0926 40 1 -5.8455 -11.7225 -10.7216 41 1 -5.8748 -11.6648 -13.1533 42 1 -4.6493 -9.3671 -7.5598 43 1 -3.8508 -8.6602 -6.0573 44 1 -3.0118 -7.5620 -3.9772 45 1 -3.6193 -1.4135 -2.4494 46 1 -2.1656 -0.8996 -3.3392 47 1 -2.3827 -1.2070 -0.3090 48 1 -2.3834 0.3346 -1.1988 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_273584_18081524_17088014.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:36:57 Heat of formation + Delta-G solvation = 103.521382 kcal Electronic energy + Delta-G solvation = -30281.828872 eV Core-core repulsion = 26034.786282 eV Total energy + Delta-G solvation = -4247.042590 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.171 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -42.56963 -41.58089 -41.21197 -40.27124 -37.96038 -37.47195 -35.53578 -34.48600 -34.43972 -33.24263 -32.02167 -31.99366 -29.54636 -27.98290 -26.75985 -25.38122 -24.49435 -24.18439 -23.58284 -22.85502 -22.02624 -21.54704 -19.68432 -18.88519 -18.81117 -18.48569 -18.32138 -18.22527 -17.52657 -17.37753 -17.11303 -16.84089 -16.78009 -16.38546 -16.08143 -15.80779 -15.48761 -15.29652 -15.15404 -14.92981 -14.69347 -14.59827 -14.26441 -14.20308 -14.11701 -13.69200 -13.59647 -13.37959 -12.94841 -12.83768 -12.56191 -12.50283 -12.26846 -12.12615 -12.00361 -11.70718 -11.55890 -11.52666 -11.39592 -11.20226 -10.95801 -10.84721 -10.43225 -10.27733 -9.74580 -4.97640 -1.24685 -0.48685 0.00906 0.13478 1.27769 1.41879 1.54819 1.75359 1.79802 2.04035 2.30588 2.39565 2.69875 2.86030 3.01032 3.09964 3.20673 3.25240 3.33984 3.42935 3.56837 3.64315 3.68435 3.71101 3.72953 3.85059 3.87337 3.93993 4.05176 4.09611 4.10852 4.19288 4.35182 4.40564 4.46464 4.49701 4.56604 4.61646 4.63632 4.66276 4.69602 4.78366 4.85955 4.97806 4.99770 5.02904 5.05272 5.06989 5.15504 5.21021 5.38465 5.44719 6.17431 6.58010 6.76718 6.83320 7.21128 Molecular weight = 357.17amu Principal moments of inertia in cm(-1) A = 0.031606 B = 0.001633 C = 0.001585 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 885.684327 B =17144.591109 C =17660.351355 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.617 5.617 2 H 0.450 0.550 3 H 0.451 0.549 4 H 0.443 0.557 5 C 0.053 3.947 6 H 0.156 0.844 7 C -0.137 4.137 8 C -0.133 4.133 9 C 0.130 3.870 10 H 0.079 0.921 11 N -0.700 5.700 12 C 0.581 3.419 13 O -0.552 6.552 14 C 0.000 4.000 15 N -0.212 5.212 16 N -0.255 5.255 17 C 0.135 3.865 18 C -0.118 4.118 19 C -0.029 4.029 20 C -0.153 4.153 21 C 0.106 3.894 22 C -0.063 4.063 23 O -0.546 6.546 24 Si 0.792 3.208 25 N -0.500 5.500 26 C 0.139 3.861 27 C -0.105 4.105 28 C -0.060 4.060 29 C -0.127 4.127 30 C -0.136 4.136 31 H 0.108 0.892 32 H 0.091 0.909 33 H 0.081 0.919 34 H 0.046 0.954 35 H 0.418 0.582 36 H 0.156 0.844 37 H 0.160 0.840 38 H 0.123 0.877 39 H 0.399 0.601 40 H -0.288 1.288 41 H -0.304 1.304 42 H 0.192 0.808 43 H 0.195 0.805 44 H 0.181 0.819 45 H 0.070 0.930 46 H 0.090 0.910 47 H 0.094 0.906 48 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 19.066 29.193 29.365 45.586 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.019 5.019 2 H 0.282 0.718 3 H 0.283 0.717 4 H 0.273 0.727 5 C -0.053 4.053 6 H 0.174 0.826 7 C -0.175 4.175 8 C -0.172 4.172 9 C 0.027 3.973 10 H 0.097 0.903 11 N -0.351 5.351 12 C 0.364 3.636 13 O -0.430 6.430 14 C -0.146 4.146 15 N -0.059 5.059 16 N -0.100 5.100 17 C -0.007 4.007 18 C -0.122 4.122 19 C -0.055 4.055 20 C -0.173 4.173 21 C -0.030 4.030 22 C -0.174 4.174 23 O -0.353 6.353 24 Si 0.698 3.302 25 N -0.211 5.211 26 C -0.021 4.021 27 C -0.133 4.133 28 C -0.088 4.088 29 C -0.166 4.166 30 C -0.174 4.174 31 H 0.126 0.874 32 H 0.110 0.890 33 H 0.100 0.900 34 H 0.065 0.935 35 H 0.255 0.745 36 H 0.174 0.826 37 H 0.178 0.822 38 H 0.140 0.860 39 H 0.249 0.751 40 H -0.215 1.215 41 H -0.232 1.232 42 H 0.208 0.792 43 H 0.212 0.788 44 H 0.198 0.802 45 H 0.089 0.911 46 H 0.109 0.891 47 H 0.113 0.887 48 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges 18.070 28.524 29.003 44.512 hybrid contribution -0.668 -0.327 0.328 0.813 sum 17.402 28.197 29.332 44.252 Atomic orbital electron populations 1.42231 1.22111 1.20933 1.16655 0.71826 0.71681 0.72720 1.22849 0.96753 0.95411 0.90311 0.82622 1.21943 1.03541 0.93130 0.98892 1.21853 0.93853 1.01342 1.00147 1.21456 0.94739 0.93920 0.87190 0.90309 1.45959 1.65069 1.05516 1.18526 1.17509 0.77524 0.83393 0.85158 1.90823 1.51381 1.66912 1.33836 1.22983 1.01548 0.94199 0.95882 1.73102 1.05552 1.31698 0.95537 1.73229 1.10547 1.09877 1.16302 1.21391 0.93583 0.91602 0.94135 1.19343 1.05225 0.95078 0.92570 1.21990 0.91253 1.01469 0.90801 1.22010 1.00155 0.94867 1.00237 1.21990 0.94484 0.92126 0.94370 1.24989 1.02252 1.07534 0.82636 1.86504 1.29070 1.78071 1.41704 0.93279 0.89651 0.71759 0.75521 1.67275 1.13708 1.40129 0.99969 1.23285 0.91402 0.91383 0.96015 1.22808 0.95282 1.04206 0.90965 1.22643 0.92240 0.93901 1.00019 1.21763 1.01999 0.92103 1.00707 1.21981 0.92209 1.04327 0.98931 0.87361 0.88997 0.89998 0.93486 0.74490 0.82616 0.82225 0.86035 0.75091 1.21497 1.23237 0.79159 0.78782 0.80208 0.91138 0.89139 0.88709 0.86459 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.62 47.70 4.15 -168.68 -0.70 47.00 16 2 H 0.45 -36.24 8.96 -89.69 -0.80 -37.05 16 3 H 0.45 -36.63 8.96 -89.69 -0.80 -37.43 16 4 H 0.44 -34.95 8.90 -89.69 -0.80 -35.75 16 5 C 0.05 -3.39 3.02 44.91 0.14 -3.26 16 6 H 0.16 -10.23 8.14 -2.39 -0.02 -10.25 16 7 C -0.14 7.36 5.43 30.59 0.17 7.53 16 8 C -0.13 5.28 5.49 30.60 0.17 5.45 16 9 C 0.13 -4.65 2.45 44.99 0.11 -4.54 16 10 H 0.08 -2.51 7.57 -2.39 -0.02 -2.53 16 11 N -0.70 18.81 5.07 -445.24 -2.26 16.55 16 12 C 0.58 -10.90 7.77 86.84 0.68 -10.22 16 13 O -0.55 7.62 16.04 -3.82 -0.06 7.56 16 14 C 0.00 0.00 6.83 41.99 0.29 0.28 16 15 N -0.21 3.08 10.73 -48.45 -0.52 2.56 16 16 N -0.26 3.18 10.72 -48.31 -0.52 2.66 16 17 C 0.13 -2.07 6.81 41.98 0.29 -1.79 16 18 C -0.12 1.76 5.89 -19.95 -0.12 1.65 16 19 C -0.03 0.42 9.70 22.70 0.22 0.64 16 20 C -0.15 2.15 9.37 22.33 0.21 2.36 16 21 C 0.11 -1.25 6.08 42.55 0.26 -0.99 16 22 C -0.06 0.73 2.98 71.23 0.21 0.94 16 23 O -0.55 6.98 11.84 -148.98 -1.76 5.22 16 24 Si 0.79 -8.06 31.87 68.60 2.19 -5.88 16 25 N -0.50 5.34 8.34 -182.95 -1.53 3.81 16 26 C 0.14 -2.13 10.60 85.00 0.90 -1.23 16 27 C -0.10 2.10 9.54 22.69 0.22 2.32 16 28 C -0.06 1.12 9.71 22.73 0.22 1.34 16 29 C -0.13 5.57 5.40 30.61 0.17 5.73 16 30 C -0.14 7.68 5.43 30.61 0.17 7.85 16 31 H 0.11 -6.06 8.14 -2.39 -0.02 -6.08 16 32 H 0.09 -4.89 8.14 -2.39 -0.02 -4.90 16 33 H 0.08 -3.29 8.14 -2.39 -0.02 -3.31 16 34 H 0.05 -1.41 8.14 -2.39 -0.02 -1.43 16 35 H 0.42 -11.68 7.95 -92.71 -0.74 -12.41 16 36 H 0.16 -2.47 7.65 -2.91 -0.02 -2.49 16 37 H 0.16 -2.58 7.47 -2.91 -0.02 -2.60 16 38 H 0.12 -1.27 7.96 -2.39 -0.02 -1.29 16 39 H 0.40 -8.40 8.70 -74.05 -0.64 -9.04 16 40 H -0.29 0.96 7.11 99.48 0.71 1.66 16 41 H -0.30 0.86 7.11 99.48 0.71 1.57 16 42 H 0.19 -4.26 6.28 -2.91 -0.02 -4.27 16 43 H 0.20 -5.27 6.34 -2.91 -0.02 -5.29 16 44 H 0.18 -3.92 7.71 -2.91 -0.02 -3.94 16 45 H 0.07 -2.71 8.14 -2.39 -0.02 -2.73 16 46 H 0.09 -4.04 8.14 -2.39 -0.02 -4.05 16 47 H 0.09 -5.31 8.14 -2.39 -0.02 -5.33 16 48 H 0.12 -6.97 8.14 -2.38 -0.02 -6.99 16 Total: 1.00 -98.82 393.25 -3.57 -102.39 By element: Atomic # 1 Polarization: -193.25 SS G_CDS: -2.69 Total: -195.94 kcal Atomic # 6 Polarization: 9.79 SS G_CDS: 4.28 Total: 14.07 kcal Atomic # 7 Polarization: 78.10 SS G_CDS: -5.52 Total: 72.58 kcal Atomic # 8 Polarization: 14.61 SS G_CDS: -1.83 Total: 12.78 kcal Atomic # 14 Polarization: -8.06 SS G_CDS: 2.19 Total: -5.88 kcal Total: -98.82 -3.57 -102.39 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081524_17088014.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 205.912 kcal (2) G-P(sol) polarization free energy of solvation -98.822 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 107.090 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.569 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -102.390 kcal (6) G-S(sol) free energy of system = (1) + (5) 103.521 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds