Wall clock time and date at job start Mon Mar 8 2021 07:43:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00901 * 1 3 3 H 1.00896 * 109.47211 * 1 2 4 4 H 1.00903 * 109.46729 * 240.00678 * 1 2 3 5 5 C 1.46896 * 109.47407 * 120.00791 * 1 2 3 6 6 H 1.09001 * 109.47187 * 299.99865 * 5 1 2 7 7 C 1.53002 * 109.47407 * 59.99596 * 5 1 2 8 8 C 1.52997 * 109.47189 * 180.02562 * 7 5 1 9 9 C 1.53000 * 109.47100 * 300.00120 * 8 7 5 10 10 H 1.08997 * 109.47282 * 299.99921 * 9 8 7 11 11 N 1.46506 * 109.47023 * 180.02562 * 9 8 7 12 12 C 1.34780 * 119.99813 * 154.99784 * 11 9 8 13 13 O 1.21532 * 120.00091 * 0.02562 * 12 11 9 14 14 C 1.47987 * 119.99836 * 179.97438 * 12 11 9 15 15 C 1.39505 * 119.98918 * 180.02562 * 14 12 11 16 16 N 1.31934 * 120.00940 * 180.02562 * 15 14 12 17 17 C 1.32953 * 119.97960 * 0.02562 * 16 15 14 18 18 C 1.48187 * 120.01435 * 180.02562 * 17 16 15 19 19 C 1.39850 * 120.54659 * 4.72824 * 18 17 16 20 20 C 1.38421 * 118.30372 * 179.75327 * 19 18 17 21 21 C 1.38298 * 119.29076 * 0.49509 * 20 19 18 22 22 C 1.50699 * 119.47044 * 179.73946 * 21 20 19 23 23 O 1.42906 * 109.47230 * 30.02326 * 22 21 20 24 24 Si 1.86303 * 109.47039 * 150.02205 * 22 21 20 25 25 N 1.31928 * 121.05560 * 359.76783 * 21 20 19 26 26 C 1.31696 * 121.86728 * 359.97080 * 25 21 20 27 27 C 1.39928 * 119.97610 * 359.97438 * 17 16 15 28 28 N 1.31566 * 119.99421 * 0.02562 * 27 17 16 29 29 C 1.52998 * 109.47378 * 60.00206 * 9 8 7 30 30 C 1.53000 * 109.47181 * 179.97438 * 5 1 2 31 31 H 1.09001 * 109.46728 * 59.99987 * 7 5 1 32 32 H 1.09000 * 109.47337 * 300.00745 * 7 5 1 33 33 H 1.09008 * 109.47020 * 180.02562 * 8 7 5 34 34 H 1.09001 * 109.47487 * 60.00219 * 8 7 5 35 35 H 0.97002 * 119.99912 * 335.00387 * 11 9 8 36 36 H 1.08004 * 119.99295 * 0.27972 * 15 14 12 37 37 H 1.08004 * 120.84388 * 359.97302 * 19 18 17 38 38 H 1.07999 * 120.35526 * 180.23562 * 20 19 18 39 39 H 1.08992 * 109.47558 * 270.02303 * 22 21 20 40 40 H 0.96692 * 114.00258 * 179.97438 * 23 22 21 41 41 H 1.48499 * 109.99994 * 178.68448 * 24 22 21 42 42 H 1.48508 * 109.99852 * 300.00302 * 24 22 21 43 43 H 1.08001 * 119.71137 * 179.97438 * 26 25 21 44 44 H 1.08004 * 120.00573 * 180.02562 * 27 17 16 45 45 H 1.09005 * 109.46950 * 59.99345 * 29 9 8 46 46 H 1.08992 * 109.47321 * 180.02562 * 29 9 8 47 47 H 1.08997 * 109.47282 * 299.99604 * 30 5 1 48 48 H 1.08995 * 109.47275 * 60.00117 * 30 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3363 0.9512 0.0000 4 1 -0.3363 -0.4756 0.8239 5 6 -0.4897 -0.6926 -1.1993 6 1 -0.1264 -0.1789 -2.0894 7 6 0.0203 -2.1351 -1.1992 8 6 -0.4893 -2.8563 -2.4487 9 6 -2.0193 -2.8563 -2.4492 10 1 -2.3829 -3.3702 -1.5594 11 7 -2.5072 -3.5474 -3.6453 12 6 -3.7292 -4.1160 -3.6437 13 8 -4.4265 -4.0550 -2.6502 14 6 -4.2223 -4.8136 -4.8521 15 6 -5.4873 -5.4016 -4.8504 16 7 -5.9271 -6.0241 -5.9273 17 6 -5.1641 -6.0912 -7.0140 18 6 -5.6575 -6.7897 -8.2242 19 6 -6.9601 -7.2966 -8.2709 20 6 -7.3744 -7.9362 -9.4264 21 6 -6.4921 -8.0616 -10.4839 22 6 -6.9370 -8.7624 -11.7417 23 8 -8.3439 -8.5819 -11.9153 24 14 -6.0337 -8.0453 -13.2048 25 7 -5.2669 -7.5779 -10.4090 26 6 -4.8290 -6.9573 -9.3332 27 6 -3.8953 -5.5012 -7.0149 28 7 -3.4577 -4.8807 -5.9404 29 6 -2.5293 -1.4138 -2.4493 30 6 -2.0197 -0.6932 -1.1989 31 1 -0.3430 -2.6488 -0.3091 32 1 1.1103 -2.1352 -1.1992 33 1 -0.1263 -3.8842 -2.4484 34 1 -0.1256 -2.3425 -3.3385 35 1 -1.9507 -3.5958 -4.4384 36 1 -6.1084 -5.3437 -3.9687 37 1 -7.6269 -7.1885 -7.4281 38 1 -8.3747 -8.3368 -9.4998 39 1 -6.7142 -9.8264 -11.6630 40 1 -8.7002 -9.0070 -12.7073 41 1 -6.4401 -8.7495 -14.4475 42 1 -6.3292 -6.5948 -13.3231 43 1 -3.8190 -6.5753 -9.3095 44 1 -3.2752 -5.5551 -7.8976 45 1 -2.1656 -0.8999 -3.3392 46 1 -3.6192 -1.4138 -2.4492 47 1 -2.3827 -1.2072 -0.3089 48 1 -2.3834 0.3343 -1.1988 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081524_17088084.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:43:19 Heat of formation + Delta-G solvation = 132.079292 kcal Electronic energy + Delta-G solvation = -30262.205165 eV Core-core repulsion = 26016.400939 eV Total energy + Delta-G solvation = -4245.804226 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.171 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -43.61836 -43.28800 -42.05583 -41.43324 -39.26832 -38.50951 -36.82916 -35.86416 -35.23882 -33.99630 -33.91877 -32.59135 -31.22643 -28.85946 -27.05971 -26.49017 -26.14597 -25.49664 -24.79247 -23.68116 -23.40187 -22.85376 -21.46632 -21.21424 -20.33709 -19.95186 -19.80459 -19.33329 -19.02852 -18.52603 -18.20367 -17.80366 -17.58636 -17.40435 -17.22368 -16.89156 -16.73490 -16.48003 -16.24752 -16.17810 -15.98831 -15.60893 -15.34337 -15.25041 -15.19723 -14.90098 -14.78984 -14.54136 -14.37043 -14.21174 -14.05891 -13.70972 -13.55943 -13.40724 -13.27585 -13.24057 -12.51258 -12.40846 -12.18404 -11.47196 -11.44968 -11.34110 -11.19247 -11.13859 -10.22337 -5.22511 -2.01046 -1.21600 -0.97121 -0.59721 -0.43697 0.60741 0.62940 0.67059 0.73123 0.83259 0.83829 1.23571 1.46385 1.53774 1.57059 1.64187 1.68162 1.76291 1.87541 1.95478 2.03511 2.05371 2.18507 2.20842 2.27986 2.36172 2.39198 2.51621 2.66258 2.71703 2.83271 2.85417 2.90414 2.97552 3.00077 3.08445 3.14052 3.20692 3.27562 3.47373 3.51521 3.57683 3.59333 3.61064 3.84829 4.03097 4.08486 4.16043 4.39609 4.42314 4.85039 5.00492 5.20155 5.63318 5.82573 5.91634 6.10565 Molecular weight = 357.17amu Principal moments of inertia in cm(-1) A = 0.028815 B = 0.001647 C = 0.001591 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 971.495416 B =17001.213644 C =17599.237909 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.437 0.563 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.138 4.138 8 C -0.127 4.127 9 C 0.139 3.861 10 H 0.098 0.902 11 N -0.712 5.712 12 C 0.587 3.413 13 O -0.521 6.521 14 C 0.004 3.996 15 C 0.131 3.869 16 N -0.436 5.436 17 C 0.168 3.832 18 C -0.125 4.125 19 C -0.024 4.024 20 C -0.147 4.147 21 C 0.161 3.839 22 C -0.080 4.080 23 O -0.541 6.541 24 Si 0.725 3.275 25 N -0.472 5.472 26 C 0.143 3.857 27 C 0.061 3.939 28 N -0.404 5.404 29 C -0.132 4.132 30 C -0.139 4.139 31 H 0.093 0.907 32 H 0.096 0.904 33 H 0.095 0.905 34 H 0.084 0.916 35 H 0.415 0.585 36 H 0.187 0.813 37 H 0.151 0.849 38 H 0.150 0.850 39 H 0.093 0.907 40 H 0.390 0.610 41 H -0.261 1.261 42 H -0.261 1.261 43 H 0.169 0.831 44 H 0.184 0.816 45 H 0.080 0.920 46 H 0.092 0.908 47 H 0.092 0.908 48 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 22.803 21.590 25.826 40.658 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.266 0.734 4 H 0.263 0.737 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.176 4.176 8 C -0.166 4.166 9 C 0.034 3.966 10 H 0.116 0.884 11 N -0.364 5.364 12 C 0.372 3.628 13 O -0.396 6.396 14 C -0.136 4.136 15 C -0.030 4.030 16 N -0.149 5.149 17 C 0.028 3.972 18 C -0.129 4.129 19 C -0.050 4.050 20 C -0.166 4.166 21 C 0.025 3.975 22 C -0.189 4.189 23 O -0.348 6.348 24 Si 0.624 3.376 25 N -0.183 5.183 26 C -0.017 4.017 27 C -0.103 4.103 28 N -0.121 5.121 29 C -0.171 4.171 30 C -0.177 4.177 31 H 0.111 0.889 32 H 0.114 0.886 33 H 0.113 0.887 34 H 0.103 0.897 35 H 0.252 0.748 36 H 0.204 0.796 37 H 0.168 0.832 38 H 0.168 0.832 39 H 0.111 0.889 40 H 0.240 0.760 41 H -0.186 1.186 42 H -0.186 1.186 43 H 0.185 0.815 44 H 0.201 0.799 45 H 0.098 0.902 46 H 0.110 0.890 47 H 0.111 0.889 48 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 22.724 22.158 25.456 40.686 hybrid contribution -1.364 -0.169 0.487 1.458 sum 21.360 21.989 25.943 40.160 Atomic orbital electron populations 1.42645 1.21166 1.20714 1.18843 0.73444 0.73389 0.73739 1.23588 0.99677 0.97436 0.87283 0.83846 1.22020 1.02775 0.90863 1.01939 1.21767 0.94389 1.03100 0.97309 1.21062 0.93094 0.92444 0.89977 0.88421 1.45748 1.17776 1.55860 1.17024 1.17577 0.81509 0.77816 0.85936 1.90854 1.56225 1.59340 1.33146 1.21969 0.94758 1.02431 0.94398 1.23855 0.93127 0.89159 0.96888 1.68619 1.33478 1.13924 0.98909 1.20903 0.91360 0.92666 0.92319 1.19322 0.96412 1.03734 0.93395 1.21873 0.94369 0.90951 0.97789 1.21944 1.02006 1.00046 0.92626 1.20645 0.89344 0.93185 0.94333 1.24652 0.87374 1.03299 1.03544 1.86449 1.19810 1.79214 1.49374 0.93663 0.90651 0.79860 0.73426 1.66876 1.15102 1.10213 1.26059 1.22826 0.99295 0.92851 0.86711 1.23806 0.94537 0.94611 0.97362 1.68240 1.33172 1.11907 0.98760 1.21954 1.03615 0.94970 0.96562 1.22057 0.89269 1.04100 1.02311 0.88890 0.88569 0.88666 0.89715 0.74799 0.79609 0.83175 0.83243 0.88903 0.76046 1.18636 1.18573 0.81451 0.79875 0.90176 0.88950 0.88935 0.88829 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.05 4.15 -4.67 -0.02 24.03 16 2 H 0.44 -17.24 8.96 -39.29 -0.35 -17.60 16 3 H 0.44 -17.15 8.96 -39.29 -0.35 -17.51 16 4 H 0.43 -16.78 8.90 -39.29 -0.35 -17.13 16 5 C 0.02 -0.76 3.02 -67.71 -0.20 -0.97 16 6 H 0.14 -4.60 8.14 -51.93 -0.42 -5.02 16 7 C -0.14 3.88 5.43 -26.73 -0.15 3.74 16 8 C -0.13 2.93 5.39 -26.73 -0.14 2.78 16 9 C 0.14 -2.72 2.45 -67.93 -0.17 -2.88 16 10 H 0.10 -1.75 7.58 -51.93 -0.39 -2.14 16 11 N -0.71 10.99 5.07 -54.70 -0.28 10.71 16 12 C 0.59 -6.54 7.77 -12.26 -0.10 -6.63 16 13 O -0.52 4.48 15.99 5.34 0.09 4.56 16 14 C 0.00 -0.04 6.75 -82.82 -0.56 -0.60 16 15 C 0.13 -1.11 10.76 -17.04 -0.18 -1.29 16 16 N -0.44 3.11 9.68 -9.27 -0.09 3.02 16 17 C 0.17 -1.38 6.74 -82.66 -0.56 -1.94 16 18 C -0.12 0.95 5.89 -104.76 -0.62 0.33 16 19 C -0.02 0.16 9.70 -38.91 -0.38 -0.22 16 20 C -0.15 0.84 9.37 -39.49 -0.37 0.47 16 21 C 0.16 -0.86 6.11 -82.53 -0.50 -1.37 16 22 C -0.08 0.50 2.98 36.01 0.11 0.61 16 23 O -0.54 3.13 11.82 -35.23 -0.42 2.71 16 24 Si 0.72 -4.33 31.87 -169.99 -5.42 -9.75 16 25 N -0.47 2.91 8.34 -9.17 -0.08 2.83 16 26 C 0.14 -1.19 10.60 -17.16 -0.18 -1.38 16 27 C 0.06 -0.63 10.61 -17.03 -0.18 -0.82 16 28 N -0.40 4.19 9.69 -9.36 -0.09 4.10 16 29 C -0.13 2.80 5.50 -26.70 -0.15 2.65 16 30 C -0.14 3.78 5.43 -26.70 -0.15 3.63 16 31 H 0.09 -2.61 8.14 -51.93 -0.42 -3.04 16 32 H 0.10 -2.80 8.14 -51.93 -0.42 -3.22 16 33 H 0.09 -1.99 8.14 -51.92 -0.42 -2.42 16 34 H 0.08 -1.97 8.14 -51.93 -0.42 -2.39 16 35 H 0.42 -6.70 7.94 -40.82 -0.32 -7.03 16 36 H 0.19 -1.78 7.64 -52.48 -0.40 -2.18 16 37 H 0.15 -1.09 7.65 -52.48 -0.40 -1.49 16 38 H 0.15 -0.91 7.47 -52.49 -0.39 -1.30 16 39 H 0.09 -0.75 7.96 -51.93 -0.41 -1.16 16 40 H 0.39 -3.69 8.74 45.56 0.40 -3.29 16 41 H -0.26 1.11 7.11 56.52 0.40 1.51 16 42 H -0.26 0.59 7.11 56.52 0.40 0.99 16 43 H 0.17 -2.06 6.25 -52.49 -0.33 -2.39 16 44 H 0.18 -2.51 6.26 -52.48 -0.33 -2.84 16 45 H 0.08 -1.70 8.14 -51.93 -0.42 -2.12 16 46 H 0.09 -1.60 8.14 -51.93 -0.42 -2.02 16 47 H 0.09 -2.49 8.14 -51.93 -0.42 -2.92 16 48 H 0.09 -2.60 8.14 -51.93 -0.42 -3.02 16 LS Contribution 392.93 15.07 5.92 5.92 Total: 1.00 -43.97 392.93 -11.49 -55.46 By element: Atomic # 1 Polarization: -93.08 SS G_CDS: -6.64 Total: -99.72 kcal Atomic # 6 Polarization: 0.60 SS G_CDS: -4.47 Total: -3.87 kcal Atomic # 7 Polarization: 45.25 SS G_CDS: -0.55 Total: 44.69 kcal Atomic # 8 Polarization: 7.60 SS G_CDS: -0.33 Total: 7.27 kcal Atomic # 14 Polarization: -4.33 SS G_CDS: -5.42 Total: -9.75 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -43.97 -11.49 -55.46 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081524_17088084.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 187.539 kcal (2) G-P(sol) polarization free energy of solvation -43.968 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 143.572 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.492 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -55.460 kcal (6) G-S(sol) free energy of system = (1) + (5) 132.079 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds