Wall clock time and date at job start Mon Mar 8 2021 07:58:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00897 * 1 3 3 H 1.00898 * 109.47614 * 1 2 4 4 H 1.00901 * 109.47494 * 239.99894 * 1 2 3 5 5 C 1.46899 * 109.46870 * 120.00192 * 1 2 3 6 6 H 1.09002 * 109.47496 * 299.99692 * 5 1 2 7 7 C 1.53002 * 109.47394 * 60.00030 * 5 1 2 8 8 C 1.53000 * 109.47233 * 180.02562 * 7 5 1 9 9 C 1.52997 * 109.47060 * 299.99657 * 8 7 5 10 10 H 1.09002 * 109.47153 * 300.00319 * 9 8 7 11 11 N 1.46500 * 109.47473 * 180.02562 * 9 8 7 12 12 C 1.34777 * 120.00270 * 154.99797 * 11 9 8 13 13 O 1.21577 * 119.99924 * 0.02562 * 12 11 9 14 14 C 1.47704 * 120.00014 * 180.02562 * 12 11 9 15 15 C 1.39626 * 120.46151 * 0.02562 * 14 12 11 16 16 N 1.31510 * 120.69230 * 179.97438 * 15 14 12 17 17 C 1.32768 * 121.77554 * 0.02562 * 16 15 14 18 18 C 1.48223 * 119.57842 * 179.97438 * 17 16 15 19 19 C 1.39821 * 120.54124 * 4.72252 * 18 17 16 20 20 C 1.38439 * 118.30194 * 179.73853 * 19 18 17 21 21 C 1.38288 * 119.29067 * 0.55935 * 20 19 18 22 22 C 1.50694 * 119.47561 * 179.68014 * 21 20 19 23 23 O 1.42903 * 109.47285 * 30.02104 * 22 21 20 24 24 Si 1.86301 * 109.47016 * 150.02263 * 22 21 20 25 25 N 1.31937 * 121.04722 * 359.70102 * 21 20 19 26 26 C 1.31693 * 121.86284 * 0.02562 * 25 21 20 27 27 C 1.39511 * 120.85154 * 0.02562 * 17 16 15 28 28 C 1.38042 * 119.21814 * 359.69786 * 27 17 16 29 29 C 1.52999 * 109.47317 * 59.99960 * 9 8 7 30 30 C 1.52997 * 109.47254 * 179.97438 * 5 1 2 31 31 H 1.08992 * 109.47063 * 59.99965 * 7 5 1 32 32 H 1.09004 * 109.46733 * 299.99678 * 7 5 1 33 33 H 1.09002 * 109.47398 * 59.99826 * 8 7 5 34 34 H 1.09001 * 109.47194 * 180.02562 * 8 7 5 35 35 H 0.97000 * 119.99491 * 335.00093 * 11 9 8 36 36 H 1.08001 * 119.65296 * 0.02562 * 15 14 12 37 37 H 1.08001 * 120.85212 * 359.97395 * 19 18 17 38 38 H 1.07994 * 120.35696 * 180.23408 * 20 19 18 39 39 H 1.08999 * 109.47152 * 270.01703 * 22 21 20 40 40 H 0.96697 * 113.99537 * 60.00010 * 23 22 21 41 41 H 1.48506 * 109.99861 * 179.97438 * 24 22 21 42 42 H 1.48498 * 110.00053 * 301.31497 * 24 22 21 43 43 H 1.08004 * 119.70952 * 179.97438 * 26 25 21 44 44 H 1.08008 * 120.39302 * 179.97438 * 27 17 16 45 45 H 1.07997 * 120.81078 * 180.29569 * 28 27 17 46 46 H 1.09000 * 109.47486 * 180.02562 * 29 9 8 47 47 H 1.09002 * 109.46716 * 60.00091 * 29 9 8 48 48 H 1.09002 * 109.47153 * 300.00004 * 30 5 1 49 49 H 1.09001 * 109.47289 * 60.00087 * 30 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9512 0.0000 4 1 -0.3364 -0.4757 0.8238 5 6 -0.4896 -0.6925 -1.1994 6 1 -0.1263 -0.1787 -2.0895 7 6 0.0204 -2.1351 -1.1994 8 6 -0.4890 -2.8561 -2.4490 9 6 -2.0190 -2.8562 -2.4496 10 1 -2.3827 -3.3702 -1.5598 11 7 -2.5069 -3.5472 -3.6458 12 6 -3.7288 -4.1158 -3.6443 13 8 -4.4264 -4.0549 -2.6504 14 6 -4.2204 -4.8129 -4.8501 15 6 -3.4271 -4.8891 -5.9966 16 7 -3.8601 -5.5091 -7.0725 17 6 -5.0568 -6.0825 -7.1151 18 6 -5.4960 -6.7680 -8.3537 19 6 -4.6251 -6.9004 -9.4395 20 6 -5.0818 -7.5538 -10.5713 21 6 -6.3763 -8.0397 -10.5961 22 6 -6.8800 -8.7452 -11.8287 23 8 -5.7893 -9.3943 -12.4853 24 14 -8.1548 -10.0132 -11.3411 25 7 -7.1773 -7.8950 -9.5578 26 6 -6.7864 -7.2857 -8.4576 27 6 -5.9068 -6.0472 -6.0093 28 6 -5.4883 -5.4114 -4.8578 29 6 -2.5291 -1.4138 -2.4496 30 6 -2.0196 -0.6931 -1.1992 31 1 -0.3429 -2.6488 -0.3095 32 1 1.1104 -2.1350 -1.1994 33 1 -0.1253 -2.3422 -3.3388 34 1 -0.1261 -3.8839 -2.4487 35 1 -1.9504 -3.5954 -4.4388 36 1 -2.4473 -4.4348 -5.9995 37 1 -3.6205 -6.5064 -9.3950 38 1 -4.4358 -7.6781 -11.4278 39 1 -7.3306 -8.0185 -12.5047 40 1 -5.3403 -10.0558 -11.9413 41 1 -8.6600 -10.7157 -12.5480 42 1 -7.5617 -10.9916 -10.3944 43 1 -7.4713 -7.1864 -7.6285 44 1 -6.8789 -6.5158 -6.0522 45 1 -6.1234 -5.3728 -3.9851 46 1 -3.6191 -1.4138 -2.4496 47 1 -2.1654 -0.8998 -3.3394 48 1 -2.3826 -1.2072 -0.3092 49 1 -2.3834 0.3344 -1.1990 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081524_17119696.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:58:47 Heat of formation + Delta-G solvation = 116.591339 kcal Electronic energy + Delta-G solvation = -30151.160734 eV Core-core repulsion = 25970.110811 eV Total energy + Delta-G solvation = -4181.049923 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.176 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -43.61005 -42.79611 -42.03813 -41.10475 -39.26562 -38.50700 -36.22285 -35.39029 -34.53253 -34.03383 -33.76479 -32.46253 -31.03295 -28.46361 -26.65005 -26.20596 -26.01104 -25.10189 -24.66451 -23.61571 -23.33616 -22.71359 -21.46434 -21.24088 -20.27383 -19.91355 -19.42258 -19.27587 -18.93346 -18.21946 -17.76111 -17.60370 -17.47081 -17.24409 -17.00742 -16.97309 -16.64518 -16.26244 -16.21599 -16.02019 -15.87152 -15.61826 -15.34138 -15.23148 -15.02295 -14.85417 -14.82391 -14.63973 -14.55700 -14.34926 -14.24639 -13.75232 -13.57811 -13.31280 -13.13847 -12.38424 -12.36375 -12.17790 -11.87305 -11.54285 -11.51331 -11.46875 -11.29443 -11.06627 -10.16152 -5.16936 -1.79479 -1.24532 -0.75520 -0.54515 -0.41147 0.62156 0.62985 0.70638 0.74348 0.80962 0.90265 1.31624 1.43657 1.54045 1.56690 1.62222 1.74943 1.88749 1.96542 2.00687 2.15280 2.19142 2.29940 2.33586 2.36401 2.44070 2.58790 2.62320 2.69283 2.72465 2.77992 2.79574 2.85824 2.92952 3.06319 3.09051 3.22734 3.24778 3.28389 3.46407 3.47028 3.56062 3.57891 3.61364 3.98570 3.99010 4.03358 4.06798 4.08354 4.34052 4.43762 4.56021 4.89171 5.12101 5.75973 5.81595 5.94373 6.18015 Molecular weight = 356.18amu Principal moments of inertia in cm(-1) A = 0.033114 B = 0.001619 C = 0.001570 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 845.360633 B =17293.036476 C =17827.010054 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.438 0.562 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.138 4.138 8 C -0.128 4.128 9 C 0.141 3.859 10 H 0.097 0.903 11 N -0.728 5.728 12 C 0.573 3.427 13 O -0.526 6.526 14 C -0.204 4.204 15 C 0.148 3.852 16 N -0.482 5.482 17 C 0.210 3.790 18 C -0.121 4.121 19 C -0.026 4.026 20 C -0.160 4.160 21 C 0.114 3.886 22 C -0.077 4.077 23 O -0.528 6.528 24 Si 0.726 3.274 25 N -0.470 5.470 26 C 0.138 3.862 27 C -0.168 4.168 28 C -0.004 4.004 29 C -0.132 4.132 30 C -0.139 4.139 31 H 0.093 0.907 32 H 0.096 0.904 33 H 0.083 0.917 34 H 0.095 0.905 35 H 0.404 0.596 36 H 0.159 0.841 37 H 0.149 0.851 38 H 0.148 0.852 39 H 0.133 0.867 40 H 0.378 0.622 41 H -0.257 1.257 42 H -0.266 1.266 43 H 0.167 0.833 44 H 0.152 0.848 45 H 0.154 0.846 46 H 0.092 0.908 47 H 0.079 0.921 48 H 0.092 0.908 49 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 21.109 25.364 28.181 43.394 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.266 0.734 4 H 0.263 0.737 5 C -0.080 4.080 6 H 0.161 0.839 7 C -0.176 4.176 8 C -0.166 4.166 9 C 0.036 3.964 10 H 0.115 0.885 11 N -0.380 5.380 12 C 0.361 3.639 13 O -0.402 6.402 14 C -0.210 4.210 15 C -0.013 4.013 16 N -0.190 5.190 17 C 0.074 3.926 18 C -0.124 4.124 19 C -0.052 4.052 20 C -0.179 4.179 21 C -0.023 4.023 22 C -0.186 4.186 23 O -0.333 6.333 24 Si 0.625 3.375 25 N -0.180 5.180 26 C -0.021 4.021 27 C -0.187 4.187 28 C -0.030 4.030 29 C -0.171 4.171 30 C -0.178 4.178 31 H 0.111 0.889 32 H 0.114 0.886 33 H 0.102 0.898 34 H 0.113 0.887 35 H 0.240 0.760 36 H 0.176 0.824 37 H 0.167 0.833 38 H 0.166 0.834 39 H 0.151 0.849 40 H 0.226 0.774 41 H -0.182 1.182 42 H -0.191 1.191 43 H 0.184 0.816 44 H 0.169 0.831 45 H 0.171 0.829 46 H 0.111 0.889 47 H 0.098 0.902 48 H 0.110 0.890 49 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 19.818 24.435 27.369 41.700 hybrid contribution 2.030 0.385 0.728 2.191 sum 21.849 24.820 28.097 43.392 Atomic orbital electron populations 1.42643 1.21170 1.20728 1.18836 0.73439 0.73369 0.73726 1.23582 0.99684 0.97406 0.87292 0.83866 1.22018 1.02770 0.90893 1.01942 1.21777 0.94491 1.03049 0.97317 1.21015 0.92923 0.92413 0.90040 0.88455 1.45843 1.18111 1.57320 1.16752 1.18030 0.80992 0.77655 0.87245 1.90833 1.55949 1.59270 1.34196 1.20860 0.98039 1.06102 0.95960 1.22812 0.98387 0.92959 0.87093 1.67598 1.14704 1.09176 1.27493 1.19788 0.89140 0.91444 0.92192 1.19484 0.96186 1.02994 0.93764 1.21822 1.00033 0.92590 0.90731 1.21952 0.97084 0.99196 0.99709 1.21935 0.91176 0.94634 0.94537 1.25074 0.96555 1.03500 0.93476 1.86631 1.46818 1.56866 1.42985 0.93545 0.85818 0.77969 0.80120 1.66991 1.35816 1.15377 0.99850 1.22930 0.92766 0.91239 0.95198 1.22165 1.01959 1.01652 0.92960 1.21705 0.93533 0.89650 0.98106 1.21951 1.03643 0.94981 0.96502 1.22060 0.89253 1.04117 1.02342 0.88886 0.88580 0.89790 0.88694 0.76017 0.82421 0.83320 0.83386 0.84949 0.77437 1.18241 1.19078 0.81612 0.83055 0.82858 0.88941 0.90232 0.88958 0.88824 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.22 4.15 -4.67 -0.02 24.20 16 2 H 0.44 -17.35 8.96 -39.29 -0.35 -17.70 16 3 H 0.44 -17.26 8.96 -39.29 -0.35 -17.62 16 4 H 0.43 -16.88 8.90 -39.29 -0.35 -17.23 16 5 C 0.02 -0.78 3.02 -67.71 -0.20 -0.98 16 6 H 0.14 -4.65 8.14 -51.93 -0.42 -5.07 16 7 C -0.14 3.95 5.43 -26.73 -0.15 3.80 16 8 C -0.13 3.04 5.39 -26.73 -0.14 2.89 16 9 C 0.14 -2.85 2.45 -67.93 -0.17 -3.02 16 10 H 0.10 -1.77 7.58 -51.93 -0.39 -2.17 16 11 N -0.73 12.27 5.03 -54.79 -0.28 11.99 16 12 C 0.57 -6.93 7.74 -12.39 -0.10 -7.03 16 13 O -0.53 4.55 16.07 5.30 0.09 4.64 16 14 C -0.20 2.26 5.89 -104.78 -0.62 1.64 16 15 C 0.15 -1.70 10.70 -17.17 -0.18 -1.88 16 16 N -0.48 4.14 9.49 -9.46 -0.09 4.05 16 17 C 0.21 -1.74 6.73 -82.88 -0.56 -2.30 16 18 C -0.12 0.91 5.89 -104.76 -0.62 0.29 16 19 C -0.03 0.18 9.69 -38.92 -0.38 -0.19 16 20 C -0.16 1.07 9.37 -39.49 -0.37 0.70 16 21 C 0.11 -0.66 6.08 -82.53 -0.50 -1.17 16 22 C -0.08 0.45 2.98 36.00 0.11 0.56 16 23 O -0.53 2.78 11.84 -35.23 -0.42 2.36 16 24 Si 0.73 -3.90 31.87 -169.99 -5.42 -9.32 16 25 N -0.47 2.75 8.34 -9.18 -0.08 2.68 16 26 C 0.14 -1.05 10.59 -17.17 -0.18 -1.23 16 27 C -0.17 1.67 9.45 -39.18 -0.37 1.29 16 28 C 0.00 0.04 9.70 -38.92 -0.38 -0.34 16 29 C -0.13 2.86 5.50 -26.71 -0.15 2.72 16 30 C -0.14 3.83 5.43 -26.71 -0.15 3.69 16 31 H 0.09 -2.64 8.14 -51.93 -0.42 -3.06 16 32 H 0.10 -2.83 8.14 -51.93 -0.42 -3.25 16 33 H 0.08 -2.03 8.14 -51.93 -0.42 -2.45 16 34 H 0.09 -2.06 8.14 -51.93 -0.42 -2.49 16 35 H 0.40 -7.59 6.65 -40.82 -0.27 -7.86 16 36 H 0.16 -2.44 6.41 -52.49 -0.34 -2.78 16 37 H 0.15 -1.22 7.63 -52.49 -0.40 -1.62 16 38 H 0.15 -1.11 7.47 -52.49 -0.39 -1.50 16 39 H 0.13 -0.89 7.96 -51.93 -0.41 -1.31 16 40 H 0.38 -3.06 8.70 45.56 0.40 -2.67 16 41 H -0.26 0.62 7.11 56.52 0.40 1.02 16 42 H -0.27 0.75 7.11 56.52 0.40 1.16 16 43 H 0.17 -1.77 6.22 -52.48 -0.33 -2.09 16 44 H 0.15 -1.83 6.23 -52.48 -0.33 -2.16 16 45 H 0.15 -1.64 7.73 -52.49 -0.41 -2.04 16 46 H 0.09 -1.63 8.14 -51.93 -0.42 -2.06 16 47 H 0.08 -1.75 8.14 -51.93 -0.42 -2.17 16 48 H 0.09 -2.51 8.14 -51.93 -0.42 -2.93 16 49 H 0.09 -2.62 8.14 -51.93 -0.42 -3.05 16 LS Contribution 395.73 15.07 5.96 5.96 Total: 1.00 -44.81 395.73 -12.27 -57.08 By element: Atomic # 1 Polarization: -96.16 SS G_CDS: -6.93 Total: -103.09 kcal Atomic # 6 Polarization: 4.54 SS G_CDS: -5.09 Total: -0.55 kcal Atomic # 7 Polarization: 43.38 SS G_CDS: -0.46 Total: 42.92 kcal Atomic # 8 Polarization: 7.33 SS G_CDS: -0.33 Total: 7.00 kcal Atomic # 14 Polarization: -3.90 SS G_CDS: -5.42 Total: -9.32 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -44.81 -12.27 -57.08 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081524_17119696.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 173.674 kcal (2) G-P(sol) polarization free energy of solvation -44.814 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 128.860 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.269 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -57.083 kcal (6) G-S(sol) free energy of system = (1) + (5) 116.591 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds