Wall clock time and date at job start Mon Mar 8 2021 09:39:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.47168 * 2 1 4 4 C 1.50704 * 109.47308 * 239.99729 * 2 1 3 5 5 C 1.38275 * 119.93583 * 299.99953 * 4 2 1 6 6 C 1.38115 * 120.06787 * 180.02562 * 5 4 2 7 7 C 1.38825 * 119.93559 * 359.97438 * 6 5 4 8 8 N 1.40241 * 120.07072 * 180.02562 * 7 6 5 9 9 C 1.36112 * 125.94593 * 179.97438 * 8 7 6 10 10 C 1.35371 * 106.05236 * 180.02562 * 9 8 7 11 11 C 1.50697 * 126.73304 * 179.97438 * 10 9 8 12 12 H 1.09002 * 109.47120 * 155.00342 * 11 10 9 13 13 C 1.52997 * 109.47466 * 275.00589 * 11 10 9 14 14 C 1.53000 * 109.47060 * 180.02562 * 13 11 10 15 15 C 1.53002 * 109.47233 * 299.99657 * 14 13 11 16 16 H 1.09002 * 109.47075 * 300.00932 * 15 14 13 17 17 C 1.52997 * 109.47415 * 180.02562 * 15 14 13 18 18 O 1.42892 * 109.47178 * 175.00180 * 17 15 14 19 19 C 1.52997 * 109.46817 * 60.00194 * 15 14 13 20 20 C 1.52999 * 109.46961 * 35.00939 * 11 10 9 21 21 N 1.33778 * 106.53620 * 0.22902 * 10 9 8 22 22 N 1.28601 * 109.05959 * 359.62091 * 21 10 9 23 23 C 1.38830 * 119.86646 * 0.28016 * 7 6 5 24 24 C 1.38127 * 119.93260 * 359.44480 * 23 7 6 25 25 H 0.96695 * 114.00088 * 300.00233 * 1 2 3 26 26 H 1.09007 * 109.46874 * 119.99863 * 2 1 3 27 27 H 1.48497 * 110.00059 * 178.68196 * 3 2 1 28 28 H 1.48504 * 109.99743 * 299.99942 * 3 2 1 29 29 H 1.08005 * 119.96497 * 0.02562 * 5 4 2 30 30 H 1.08001 * 120.03514 * 180.02562 * 6 5 4 31 31 H 1.07995 * 126.97551 * 0.05235 * 9 8 7 32 32 H 1.09002 * 109.47153 * 59.99773 * 13 11 10 33 33 H 1.09001 * 109.46832 * 299.99964 * 13 11 10 34 34 H 1.08992 * 109.47399 * 59.99823 * 14 13 11 35 35 H 1.09004 * 109.46724 * 180.02562 * 14 13 11 36 36 H 1.09000 * 109.46818 * 295.00198 * 17 15 14 37 37 H 1.09001 * 109.47096 * 55.00094 * 17 15 14 38 38 H 0.96703 * 114.00148 * 179.97438 * 18 17 15 39 39 H 1.09002 * 109.47153 * 60.00231 * 19 15 14 40 40 H 1.09001 * 109.47289 * 180.02562 * 19 15 14 41 41 H 1.09000 * 109.47486 * 59.99568 * 20 11 10 42 42 H 1.09002 * 109.46716 * 299.99650 * 20 11 10 43 43 H 1.07990 * 120.03047 * 179.72300 * 23 7 6 44 44 H 1.07994 * 119.96541 * 180.27962 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 1.5966 -2.0343 -1.4479 6 6 2.0559 -2.6883 -2.5744 7 6 2.8542 -2.0150 -3.4891 8 7 3.3217 -2.6761 -4.6341 9 6 4.1071 -2.1343 -5.6048 10 6 4.3140 -3.1181 -6.5114 11 6 5.1234 -3.0202 -7.7788 12 1 5.4777 -4.0116 -8.0612 13 6 4.2499 -2.4524 -8.8992 14 6 5.0716 -2.3536 -10.1861 15 6 6.2700 -1.4306 -9.9564 16 1 5.9161 -0.4391 -9.6741 17 6 7.0913 -1.3313 -11.2434 18 8 8.1429 -0.3804 -11.0652 19 6 7.1435 -1.9984 -8.8360 20 6 6.3216 -2.0970 -7.5486 21 7 3.6544 -4.1927 -6.0643 22 7 3.0822 -3.9008 -4.9503 23 6 3.1930 -0.6874 -3.2654 24 6 2.7259 -0.0370 -2.1399 25 1 -0.3933 0.4417 0.7650 26 1 1.7923 -0.5139 0.8901 27 1 3.5346 1.7703 0.0321 28 1 1.5615 2.4678 -1.2085 29 1 0.9752 -2.5575 -0.7361 30 1 1.7938 -3.7222 -2.7439 31 1 4.4882 -1.1246 -5.6437 32 1 3.8957 -1.4610 -8.6168 33 1 3.3963 -3.1102 -9.0632 34 1 5.4254 -3.3451 -10.4683 35 1 4.4493 -1.9487 -10.9842 36 1 7.5189 -2.3062 -11.4777 37 1 6.4468 -1.0111 -12.0620 38 1 8.7058 -0.2660 -11.8432 39 1 7.4974 -2.9900 -9.1182 40 1 7.9971 -1.3407 -8.6720 41 1 6.9439 -2.5014 -6.7504 42 1 5.9673 -1.1056 -7.2662 43 1 3.8175 -0.1624 -3.9730 44 1 2.9855 0.9970 -1.9677 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273910_12385126_14775216.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:39:36 Heat of formation + Delta-G solvation = 38.040178 kcal Electronic energy + Delta-G solvation = -25720.185356 eV Core-core repulsion = 22026.800749 eV Total energy + Delta-G solvation = -3693.384607 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.157 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -44.48146 -40.88923 -40.03279 -37.95548 -37.47535 -35.72215 -33.91703 -32.61207 -31.85654 -31.67134 -30.75095 -27.30917 -26.73266 -24.61484 -24.30739 -23.59229 -23.02001 -22.03654 -21.42012 -20.61597 -19.59021 -18.56840 -18.23923 -17.49552 -17.19119 -16.90604 -16.64997 -16.28051 -16.04389 -15.81250 -15.32665 -15.22315 -15.03966 -14.86589 -14.67507 -14.25594 -14.07856 -13.96178 -13.85873 -13.52789 -13.18227 -13.11329 -12.70368 -12.57287 -12.40650 -12.21522 -12.14326 -12.08426 -11.90261 -11.77524 -11.46867 -11.25097 -11.17961 -10.84850 -10.52541 -10.35898 -10.22315 -9.65494 -5.11669 -0.60881 -0.01606 0.84483 1.11353 1.16866 1.49336 1.51406 1.80482 2.35044 3.05717 3.11708 3.21570 3.34166 3.46415 3.60786 3.67595 3.67962 3.79618 3.88186 3.93833 4.05434 4.09422 4.14960 4.22833 4.28173 4.32272 4.36833 4.39532 4.45746 4.50036 4.57811 4.62243 4.65392 4.68547 4.79037 4.84307 4.95992 5.01702 5.10741 5.12793 5.15088 5.17343 5.26306 5.27361 5.33988 5.41476 5.48981 5.74411 6.45482 6.67143 7.45647 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.075 4.075 3 Si 0.685 3.315 4 C -0.066 4.066 5 C -0.067 4.067 6 C -0.097 4.097 7 C 0.128 3.872 8 N -0.244 5.244 9 C -0.046 4.046 10 C -0.002 4.002 11 C -0.002 4.002 12 H 0.093 0.907 13 C -0.107 4.107 14 C -0.113 4.113 15 C -0.089 4.089 16 H 0.078 0.922 17 C 0.078 3.922 18 O -0.574 6.574 19 C -0.109 4.109 20 C -0.112 4.112 21 N -0.254 5.254 22 N -0.076 5.076 23 C -0.110 4.110 24 C -0.102 4.102 25 H 0.386 0.614 26 H 0.081 0.919 27 H -0.253 1.253 28 H -0.249 1.249 29 H 0.144 0.856 30 H 0.148 0.852 31 H 0.192 0.808 32 H 0.065 0.935 33 H 0.069 0.931 34 H 0.068 0.932 35 H 0.068 0.932 36 H 0.046 0.954 37 H 0.045 0.955 38 H 0.380 0.620 39 H 0.063 0.937 40 H 0.073 0.927 41 H 0.067 0.933 42 H 0.064 0.936 43 H 0.139 0.861 44 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.529 4.806 2.703 5.539 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.185 4.185 3 Si 0.585 3.415 4 C -0.067 4.067 5 C -0.086 4.086 6 C -0.117 4.117 7 C 0.036 3.964 8 N -0.031 5.031 9 C -0.194 4.194 10 C -0.138 4.138 11 C -0.022 4.022 12 H 0.111 0.889 13 C -0.145 4.145 14 C -0.150 4.150 15 C -0.107 4.107 16 H 0.096 0.904 17 C 0.000 4.000 18 O -0.380 6.380 19 C -0.147 4.147 20 C -0.151 4.151 21 N -0.121 5.121 22 N -0.053 5.053 23 C -0.131 4.131 24 C -0.121 4.121 25 H 0.234 0.766 26 H 0.098 0.902 27 H -0.178 1.178 28 H -0.173 1.173 29 H 0.162 0.838 30 H 0.166 0.834 31 H 0.208 0.792 32 H 0.083 0.917 33 H 0.088 0.912 34 H 0.087 0.913 35 H 0.086 0.914 36 H 0.064 0.936 37 H 0.064 0.936 38 H 0.227 0.773 39 H 0.082 0.918 40 H 0.092 0.908 41 H 0.086 0.914 42 H 0.083 0.917 43 H 0.157 0.843 44 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 0.128 3.779 2.677 4.633 hybrid contribution 0.758 0.424 -0.950 1.287 sum 0.886 4.203 1.727 4.630 Atomic orbital electron populations 1.86484 1.16819 1.81904 1.49905 1.24700 0.86081 1.10581 0.97153 0.95032 0.80751 0.77893 0.87785 1.19560 0.97273 0.94462 0.95373 1.20984 0.97549 0.93514 0.96556 1.21089 0.96260 1.01392 0.92986 1.17656 1.00317 0.92092 0.86305 1.44626 1.32993 1.09391 1.16070 1.23497 1.01797 1.02635 0.91449 1.22016 1.02526 0.89994 0.99286 1.19542 0.93174 1.01213 0.88285 0.88896 1.21540 0.97893 1.01419 0.93662 1.21522 0.96022 0.99968 0.97513 1.21184 0.94931 1.00142 0.94459 0.90379 1.22244 0.88944 0.91606 0.97179 1.86464 1.45473 1.63374 1.42649 1.21521 0.98067 1.01430 0.93648 1.21638 0.95838 0.99261 0.98317 1.75103 1.09250 1.24442 1.03288 1.78384 1.20282 0.95708 1.10941 1.20768 1.01445 0.92049 0.98852 1.20725 0.98443 0.99290 0.93595 0.76639 0.90161 1.17758 1.17301 0.83803 0.83397 0.79153 0.91661 0.91190 0.91306 0.91351 0.93557 0.93650 0.77305 0.91776 0.90789 0.91418 0.91693 0.84321 0.85073 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.66 12.74 -35.23 -0.45 0.21 16 2 C -0.07 0.12 2.81 36.01 0.10 0.22 16 3 Si 0.68 -1.70 29.78 -169.99 -5.06 -6.76 16 4 C -0.07 -0.05 5.43 -104.59 -0.57 -0.61 16 5 C -0.07 -0.05 9.60 -39.61 -0.38 -0.43 16 6 C -0.10 -0.17 9.62 -39.41 -0.38 -0.55 16 7 C 0.13 0.29 6.68 -83.57 -0.56 -0.27 16 8 N -0.24 -0.87 3.56 -10.47 -0.04 -0.91 16 9 C -0.05 -0.08 10.10 -16.68 -0.17 -0.25 16 10 C 0.00 -0.01 6.16 -82.77 -0.51 -0.52 16 11 C 0.00 0.00 2.65 -91.78 -0.24 -0.24 16 12 H 0.09 0.11 8.14 -51.93 -0.42 -0.32 16 13 C -0.11 0.01 5.19 -26.73 -0.14 -0.13 16 14 C -0.11 0.11 5.20 -26.73 -0.14 -0.03 16 15 C -0.09 0.04 2.43 -90.62 -0.22 -0.18 16 16 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 17 C 0.08 -0.05 6.43 37.16 0.24 0.19 16 18 O -0.57 -0.30 13.20 -35.23 -0.46 -0.77 16 19 C -0.11 0.03 5.10 -26.70 -0.14 -0.11 16 20 C -0.11 0.06 4.81 -26.70 -0.13 -0.07 16 21 N -0.25 -1.53 12.39 33.29 0.41 -1.12 16 22 N -0.08 -0.45 12.42 60.35 0.75 0.30 16 23 C -0.11 -0.06 9.46 -39.40 -0.37 -0.43 16 24 C -0.10 -0.06 8.66 -39.61 -0.34 -0.41 16 25 H 0.39 -2.36 8.74 45.56 0.40 -1.96 16 26 H 0.08 -0.27 7.96 -51.92 -0.41 -0.68 16 27 H -0.25 0.06 7.11 56.52 0.40 0.46 16 28 H -0.25 -0.17 7.11 56.52 0.40 0.24 16 29 H 0.14 -0.11 8.06 -52.48 -0.42 -0.53 16 30 H 0.15 0.23 7.69 -52.49 -0.40 -0.17 16 31 H 0.19 -0.33 6.53 -52.49 -0.34 -0.67 16 32 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 33 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 34 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 35 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 36 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 37 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 38 H 0.38 -1.31 9.12 45.56 0.42 -0.89 16 39 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 40 H 0.07 0.06 7.82 -51.93 -0.41 -0.35 16 41 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 42 H 0.06 -0.08 7.38 -51.93 -0.38 -0.46 16 43 H 0.14 -0.26 6.77 -52.49 -0.36 -0.61 16 44 H 0.13 -0.05 4.87 -52.49 -0.26 -0.31 16 LS Contribution 354.98 15.07 5.35 5.35 Total: 0.00 -8.79 354.98 -9.04 -17.83 By element: Atomic # 1 Polarization: -4.72 SS G_CDS: -5.59 Total: -10.32 kcal Atomic # 6 Polarization: 0.12 SS G_CDS: -3.94 Total: -3.82 kcal Atomic # 7 Polarization: -2.84 SS G_CDS: 1.12 Total: -1.72 kcal Atomic # 8 Polarization: 0.35 SS G_CDS: -0.91 Total: -0.56 kcal Atomic # 14 Polarization: -1.70 SS G_CDS: -5.06 Total: -6.76 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -8.79 -9.04 -17.83 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273910_12385126_14775216.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.875 kcal (2) G-P(sol) polarization free energy of solvation -8.794 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 47.081 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.041 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.835 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.040 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds