Wall clock time and date at job start Mon Mar 8 2021 06:24:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00895 * 1 3 3 H 1.00892 * 109.47270 * 1 2 4 4 H 1.00898 * 109.47218 * 239.99825 * 1 2 3 5 5 C 1.46906 * 109.47030 * 120.00499 * 1 2 3 6 6 H 1.08996 * 109.46825 * 180.02562 * 5 1 2 7 7 C 1.52999 * 109.46507 * 299.99794 * 5 1 2 8 8 C 1.53005 * 109.47159 * 60.00509 * 7 5 1 9 9 C 1.52997 * 109.47452 * 59.99536 * 8 7 5 10 10 H 1.09002 * 109.46695 * 59.99734 * 9 8 7 11 11 C 1.50693 * 109.46989 * 180.02562 * 9 8 7 12 12 C 1.35365 * 126.73350 * 34.71425 * 11 9 8 13 13 N 1.36120 * 106.04978 * 179.90592 * 12 11 9 14 14 C 1.40251 * 125.93787 * 180.12933 * 13 12 11 15 15 C 1.38799 * 120.05927 * 180.24885 * 14 13 12 16 16 C 1.50700 * 120.03553 * 359.94902 * 15 14 13 17 17 O 1.42900 * 109.46913 * 285.00293 * 16 15 14 18 18 Si 1.86302 * 109.47016 * 165.00223 * 16 15 14 19 19 C 1.38152 * 119.93280 * 179.97438 * 15 14 13 20 20 C 1.38257 * 120.06500 * 359.97438 * 19 15 14 21 21 C 1.38301 * 120.12812 * 0.02574 * 20 19 15 22 22 C 1.38102 * 120.06528 * 359.70018 * 21 20 19 23 23 N 1.28726 * 108.11541 * 0.35882 * 13 12 11 24 24 N 1.28600 * 110.23408 * 359.77059 * 23 13 12 25 25 C 1.53002 * 109.46817 * 300.00239 * 9 8 7 26 26 C 1.52997 * 109.47302 * 59.99767 * 5 1 2 27 27 H 1.09000 * 109.47486 * 299.99972 * 7 5 1 28 28 H 1.09002 * 109.46716 * 180.02562 * 7 5 1 29 29 H 1.09002 * 109.46935 * 299.99411 * 8 7 5 30 30 H 1.09001 * 109.46812 * 179.97438 * 8 7 5 31 31 H 1.07999 * 126.97698 * 359.97438 * 12 11 9 32 32 H 1.09000 * 109.46770 * 45.00593 * 16 15 14 33 33 H 0.96699 * 113.99966 * 60.00426 * 17 16 15 34 34 H 1.48501 * 110.00148 * 300.00173 * 18 16 15 35 35 H 1.48507 * 110.00032 * 61.32134 * 18 16 15 36 36 H 1.07993 * 119.96584 * 179.97438 * 19 15 14 37 37 H 1.08000 * 119.93455 * 180.02562 * 20 19 15 38 38 H 1.08001 * 119.96628 * 179.97438 * 21 20 19 39 39 H 1.08002 * 120.03405 * 180.27542 * 22 21 20 40 40 H 1.08992 * 109.47063 * 299.99823 * 25 9 8 41 41 H 1.09004 * 109.46733 * 179.97438 * 25 9 8 42 42 H 1.09002 * 109.47153 * 180.02562 * 26 5 1 43 43 H 1.09001 * 109.46832 * 60.00356 * 26 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0089 0.0000 0.0000 3 1 -0.3363 0.9512 0.0000 4 1 -0.3363 -0.4757 0.8238 5 6 -0.4897 -0.6926 -1.1994 6 1 -1.5796 -0.6922 -1.1996 7 6 0.0204 0.0286 -2.4486 8 6 1.5504 0.0286 -2.4486 9 6 2.0605 -1.4139 -2.4485 10 1 1.6971 -1.9277 -3.3385 11 6 3.5674 -1.4138 -2.4479 12 6 4.3767 -0.5221 -1.8296 13 7 5.6503 -0.9184 -2.1012 14 6 6.8212 -0.2860 -1.6584 15 6 8.0629 -0.7942 -2.0141 16 6 8.1546 -2.0272 -2.8758 17 8 7.8360 -3.1798 -2.0935 18 14 9.8858 -2.1899 -3.5447 19 6 9.2146 -0.1689 -1.5769 20 6 9.1313 0.9623 -0.7864 21 6 7.8954 1.4709 -0.4304 22 6 6.7407 0.8533 -0.8691 23 7 5.5930 -1.9717 -2.8390 24 7 4.3678 -2.2917 -3.0629 25 6 1.5504 -2.1350 -1.1993 26 6 0.0204 -2.1351 -1.1994 27 1 -0.3430 1.0563 -2.4487 28 1 -0.3433 -0.4850 -3.3386 29 1 1.9137 0.5425 -1.5586 30 1 1.9137 0.5421 -3.3388 31 1 4.0735 0.3302 -1.2396 32 1 7.4512 -1.9445 -3.7043 33 1 6.9472 -3.1633 -1.7127 34 1 10.2294 -0.9973 -4.3601 35 1 10.8512 -2.3353 -2.4257 36 1 10.1810 -0.5641 -1.8530 37 1 10.0330 1.4496 -0.4462 38 1 7.8333 2.3544 0.1876 39 1 5.7759 1.2535 -0.5945 40 1 1.9136 -1.6212 -0.3094 41 1 1.9134 -3.1628 -1.1995 42 1 -0.3426 -2.6489 -2.0896 43 1 -0.3430 -2.6489 -0.3094 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273910_15259592_17761092.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:24:03 Heat of formation + Delta-G solvation = 221.815029 kcal Electronic energy + Delta-G solvation = -25363.002713 eV Core-core repulsion = 21917.187724 eV Total energy + Delta-G solvation = -3445.814989 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 302.161 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -45.88917 -43.93579 -41.86056 -39.04528 -38.36999 -36.80253 -34.69368 -34.16585 -33.85100 -32.20624 -31.61786 -28.02161 -27.09491 -26.16312 -25.82736 -24.56028 -24.00789 -23.02646 -22.59180 -21.72698 -21.44699 -20.80160 -19.30481 -19.16458 -18.83576 -18.45649 -18.10852 -17.92894 -17.38422 -17.16678 -17.13007 -16.52455 -16.26003 -16.08769 -15.92120 -15.73801 -15.49276 -15.44216 -15.03069 -14.59537 -14.39454 -14.27694 -14.12095 -13.82188 -13.75284 -13.58383 -13.45541 -13.10260 -13.08852 -12.81676 -12.16079 -11.86571 -11.51093 -11.17155 -10.77841 -5.49137 -1.65949 -1.18113 -1.00991 -0.31298 -0.06522 0.13378 0.63231 0.67797 0.69199 0.81269 0.96375 1.22101 1.35771 1.42332 1.43977 1.56449 1.65762 1.89976 1.94238 2.10002 2.16787 2.18873 2.23332 2.27718 2.42100 2.52346 2.62271 2.68000 2.76005 2.79265 2.87165 2.97826 3.02112 3.05188 3.12444 3.14530 3.21826 3.33645 3.41494 3.50053 3.51532 3.63101 3.89046 3.99605 4.11328 4.22660 4.28007 4.66843 5.75968 6.16166 Molecular weight = 302.16amu Principal moments of inertia in cm(-1) A = 0.022581 B = 0.004270 C = 0.003809 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1239.668110 B = 6556.560654 C = 7348.585117 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.640 5.640 2 H 0.428 0.572 3 H 0.436 0.564 4 H 0.437 0.563 5 C 0.030 3.970 6 H 0.147 0.853 7 C -0.143 4.143 8 C -0.130 4.130 9 C -0.005 4.005 10 H 0.109 0.891 11 C -0.017 4.017 12 C -0.047 4.047 13 N -0.232 5.232 14 C 0.112 3.888 15 C -0.085 4.085 16 C -0.089 4.089 17 O -0.521 6.521 18 Si 0.750 3.250 19 C -0.100 4.100 20 C -0.091 4.091 21 C -0.095 4.095 22 C -0.111 4.111 23 N -0.072 5.072 24 N -0.244 5.244 25 C -0.127 4.127 26 C -0.144 4.144 27 H 0.095 0.905 28 H 0.117 0.883 29 H 0.059 0.941 30 H 0.098 0.902 31 H 0.188 0.812 32 H 0.093 0.907 33 H 0.355 0.645 34 H -0.245 1.245 35 H -0.248 1.248 36 H 0.141 0.859 37 H 0.143 0.857 38 H 0.145 0.855 39 H 0.134 0.866 40 H 0.059 0.941 41 H 0.098 0.902 42 H 0.117 0.883 43 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -24.187 8.185 9.547 27.261 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.041 5.041 2 H 0.259 0.741 3 H 0.264 0.736 4 H 0.265 0.735 5 C -0.073 4.073 6 H 0.165 0.835 7 C -0.181 4.181 8 C -0.168 4.168 9 C -0.026 4.026 10 H 0.127 0.873 11 C -0.155 4.155 12 C -0.196 4.196 13 N -0.018 5.018 14 C 0.021 3.979 15 C -0.088 4.088 16 C -0.197 4.197 17 O -0.326 6.326 18 Si 0.647 3.353 19 C -0.119 4.119 20 C -0.110 4.110 21 C -0.114 4.114 22 C -0.132 4.132 23 N -0.050 5.050 24 N -0.110 5.110 25 C -0.165 4.165 26 C -0.181 4.181 27 H 0.113 0.887 28 H 0.136 0.864 29 H 0.078 0.922 30 H 0.116 0.884 31 H 0.205 0.795 32 H 0.111 0.889 33 H 0.204 0.796 34 H -0.170 1.170 35 H -0.172 1.172 36 H 0.158 0.842 37 H 0.161 0.839 38 H 0.163 0.837 39 H 0.152 0.848 40 H 0.078 0.922 41 H 0.117 0.883 42 H 0.136 0.864 43 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -22.100 7.090 8.338 24.662 hybrid contribution -1.561 2.012 1.771 3.102 sum -23.661 9.103 10.110 27.293 Atomic orbital electron populations 1.42876 1.21460 1.20709 1.19007 0.74064 0.73555 0.73468 1.23467 1.03941 0.95813 0.84096 0.83518 1.22161 0.96415 1.02498 0.97009 1.21844 0.94169 0.96555 1.04263 1.19514 0.86471 0.95984 1.00586 0.87260 1.21693 0.96952 0.95264 1.01618 1.23354 0.83223 1.04748 1.08301 1.44739 1.05868 1.18920 1.32257 1.17511 0.82619 0.95633 1.02106 1.20365 0.91049 0.98551 0.98791 1.25563 1.15546 0.83344 0.95291 1.86795 1.36918 1.39305 1.69603 0.92301 0.71483 0.87529 0.83959 1.21156 0.97692 0.95834 0.97171 1.21500 0.98940 0.94912 0.95616 1.21164 0.91219 0.99982 0.99020 1.20831 1.00335 0.93859 0.98133 1.78430 1.15415 1.01083 1.10068 1.75214 0.95222 1.22097 1.18443 1.21811 0.93762 1.04302 0.96663 1.22181 0.96608 0.91886 1.07474 0.88660 0.86445 0.92217 0.88390 0.79463 0.88900 0.79591 1.16964 1.17241 0.84195 0.83881 0.83728 0.84772 0.92203 0.88299 0.86448 0.88674 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 23.66 4.05 -4.67 -0.02 23.64 16 2 H 0.43 -15.71 5.25 -39.29 -0.21 -15.92 16 3 H 0.44 -17.05 8.96 -39.30 -0.35 -17.40 16 4 H 0.44 -16.95 8.96 -39.29 -0.35 -17.31 16 5 C 0.03 -0.98 3.50 -67.71 -0.24 -1.21 16 6 H 0.15 -4.84 8.14 -51.93 -0.42 -5.26 16 7 C -0.14 4.08 5.59 -26.73 -0.15 3.93 16 8 C -0.13 3.34 4.53 -26.73 -0.12 3.22 16 9 C -0.01 0.11 2.65 -91.78 -0.24 -0.13 16 10 H 0.11 -2.16 8.14 -51.93 -0.42 -2.59 16 11 C -0.02 0.28 6.16 -82.77 -0.51 -0.23 16 12 C -0.05 0.77 10.09 -16.67 -0.17 0.60 16 13 N -0.23 2.65 3.52 -10.47 -0.04 2.61 16 14 C 0.11 -1.17 6.63 -83.57 -0.55 -1.73 16 15 C -0.09 0.70 5.28 -104.45 -0.55 0.15 16 16 C -0.09 0.64 1.82 36.01 0.07 0.70 16 17 O -0.52 2.99 12.52 -35.23 -0.44 2.55 16 18 Si 0.75 -5.74 30.41 -169.99 -5.17 -10.91 16 19 C -0.10 0.86 8.66 -39.61 -0.34 0.52 16 20 C -0.09 0.98 10.04 -39.55 -0.40 0.58 16 21 C -0.10 1.20 10.04 -39.61 -0.40 0.80 16 22 C -0.11 1.46 9.46 -39.41 -0.37 1.09 16 23 N -0.07 0.64 7.53 60.35 0.45 1.09 16 24 N -0.24 2.48 12.39 33.29 0.41 2.89 16 25 C -0.13 3.14 4.92 -26.73 -0.13 3.01 16 26 C -0.14 4.03 5.59 -26.73 -0.15 3.88 16 27 H 0.09 -2.79 8.14 -51.93 -0.42 -3.21 16 28 H 0.12 -3.08 8.14 -51.93 -0.42 -3.50 16 29 H 0.06 -1.73 5.88 -51.93 -0.31 -2.03 16 30 H 0.10 -2.19 8.14 -51.93 -0.42 -2.61 16 31 H 0.19 -4.04 6.53 -52.49 -0.34 -4.39 16 32 H 0.09 -0.66 6.09 -51.93 -0.32 -0.97 16 33 H 0.36 -2.42 6.94 45.56 0.32 -2.11 16 34 H -0.25 1.59 7.11 56.52 0.40 1.99 16 35 H -0.25 1.41 6.81 56.52 0.38 1.80 16 36 H 0.14 -1.18 4.94 -52.49 -0.26 -1.44 16 37 H 0.14 -1.77 8.06 -52.49 -0.42 -2.19 16 38 H 0.14 -2.17 8.06 -52.49 -0.42 -2.59 16 39 H 0.13 -2.32 6.77 -52.49 -0.36 -2.67 16 40 H 0.06 -1.64 6.65 -51.93 -0.35 -1.99 16 41 H 0.10 -2.04 8.14 -51.93 -0.42 -2.46 16 42 H 0.12 -3.03 8.14 -51.93 -0.42 -3.45 16 43 H 0.09 -2.71 8.14 -51.93 -0.42 -3.14 16 LS Contribution 327.51 15.07 4.94 4.94 Total: 1.00 -41.36 327.51 -10.08 -51.44 By element: Atomic # 1 Polarization: -87.47 SS G_CDS: -5.96 Total: -93.43 kcal Atomic # 6 Polarization: 19.43 SS G_CDS: -4.26 Total: 15.17 kcal Atomic # 7 Polarization: 29.43 SS G_CDS: 0.81 Total: 30.24 kcal Atomic # 8 Polarization: 2.99 SS G_CDS: -0.44 Total: 2.55 kcal Atomic # 14 Polarization: -5.74 SS G_CDS: -5.17 Total: -10.91 kcal Total LS contribution 4.94 Total: 4.94 kcal Total: -41.36 -10.08 -51.44 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273910_15259592_17761092.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 273.255 kcal (2) G-P(sol) polarization free energy of solvation -41.356 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 231.899 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.084 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -51.440 kcal (6) G-S(sol) free energy of system = (1) + (5) 221.815 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds